Array 1 117412-118065 **** Predicted by CRISPRDetect 2.4 *** >NZ_MQTG01000001.1 Bacillus cereus strain MOD1_Bc71 Bc71_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================================== ================== 117412 32 100.0 33 ................................ GTTTAGCACCTGTGCATCGTATTTTTCAGATTG 117477 32 100.0 34 ................................ TTTAGAATTAAGGATATTGATTATGATGATACAG 117543 32 96.9 35 ...............A................ GATGATAAAACTAAAGTTGGAAAACAAAAAATTAG 117610 32 100.0 34 ................................ AGTTGAGTGAATTAATGCTCGTGAGTGATTGTAC 117676 32 93.8 34 ...........A......A............. TGTATGATTACCTTAGCAAATTCAACGATAAGTT 117742 32 93.8 35 ...........A.......T............ TTAACACGTAAGAATCTATTTTTAGAAATTACATT 117809 32 93.8 34 .........C...A.................. CCCTGCTGATGCAACATCGCTACCTACATTTTGT 117875 32 90.6 34 .........C...A......A........... TACCTAGGGTTTATATTTATCTGGAAAGTTCATA 117941 32 96.9 62 .....................A.......... GGGGATATGCCAGGCGTTTGGCAAAGTGTTATTGGTTTATCAGGAGTCATTGGCTTGTCATG 118035 31 90.6 0 .........C.-.A.................. | ========== ====== ====== ====== ================================ ============================================================== ================== 10 32 95.6 37 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : TATCTAGTTATATATTAAAAGTTGAACACAAATAAAGAGAAGAATAATTAAAGTATTTTTGAGTTAGCAAAATAAAGGAATTTTTAGTATTCAATATTCTTAAGAATGTTATATCATAAAAAAAGATCAAACGATGATATAAAGAATAAACTTGATAGGTGGATAGAGAGACAATATATAGTGAATTTTATTGTAAATTACGAATCAATATATTAAGGGTATTATGAAACTATACATTTTGGTTATTCAATTAGGTAATAGCTATGAAAATAAGGTCGAACATATTGGTGTAAAAGAATCAATTGATTTAGAAAGCCCTTTAATTTTTTAGGTGCGAATGTATAGCAAACATGAAATTCCTAGTACATTCGCACCTTGAATTCTCATGCTTTATAATGGTGATTTATGATTTTTATACAAATTACTTTATTAAATAAAAACATTTGTATATTTTTGGATAAAACTAACGTATTTTTGGTTGATTTCGAACACAAATCGGT # Right flank : TTAGCAATGCTCTGGCTTTAAAACGCTCTGCAGATGTAGATACTCAACTGGAAGTATCTATATCTGTAGTATCTAACACACATGTTATAAACATAAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGGCAAGTACAAACAGTCGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATCGGTATAAAACATTTAGCTGGTTTAGCAGGTATGCTCCATGATATGGGTAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCCATTATATCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCCT # Questionable array : NO Score: 8.37 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:-0.17, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 126424-126851 **** Predicted by CRISPRDetect 2.4 *** >NZ_MQTG01000001.1 Bacillus cereus strain MOD1_Bc71 Bc71_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 126424 32 100.0 33 ................................ CTTAACTGGGAAAATCCTTTAGACGCTTCTTTT 126489 32 100.0 33 ................................ AAAGATACTAAAATGGGTACGCCTGTTAAAGCA 126554 32 100.0 34 ................................ GTCCAGCATGTGCCTTGGCAAACTCAGGAGGAAC 126620 32 96.9 35 ...........C.................... TTAGATTATTTCAATGCAAAAATAGAAGTAAACAA 126687 32 96.9 35 ...........C.................... TTAGATTATTTCAATGCAAAAATAGAAGTAAACAA 126754 32 93.8 34 ...................T...A........ ATTAGACGAGATATATCCACAGAAGAAGAATTAC 126820 32 87.5 0 .......T............C.AA........ | ========== ====== ====== ====== ================================ =================================== ================== 7 32 96.4 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : AGATGAATATCCACCATTTTTATGGAAGTAGGTGTAACAGTTGCTAGTATTAATAACATATGATGTAAGCACAACTAACAGTGTTGGACAAAAAAGACTGCGAAAAGTTTCGAAAATATGTCAAAATTATGGTCAACGAGTCCAAAATTCAGTGTTTGAATGTGTTGTGGATGCAACTCAATTTGCTACTTTAAAGATGGAATTAATTAAAATTATTAACGAAGATGAGGATAGTCTTAGATTTTATCAGTTAGGTAATAACTATAAAAATAGGGTTGAACATATCGGTATAAAGGAATCCGTTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAATGTATAGCACACATAAAATTCCTCGTGCATTCGCACCTGAATTTTCATAATTTATGAGCGAAGTTTAATATTTTTTATACAAATTCTCTTATTAAATAAAGAAATATGTATATTTTTGAACAGAATTAGTGTATTTTTGTATGGTTTTAAACAAAAATCGCT # Right flank : TGAAATTACTTGCTGCCTTATCTAGATTACTTTCTTCGCATCTCAGGTGTGTGGAGTAAGACTGATAAAATAATTGATAGTAATTTAGTGCCTCTGTTGGAGAAAGGGGACCTGTTTCAATTCATAAAGCAACGAGTGTTGATCCAATTGACATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGAGCATGGGAAGGATAAAGTTTTAGATACGATGGGGATGAAGCATCGTGTTGATTTCGCAGTCTATGTTTGTTGGTGGGATCATCATTCAAAACCTGGTCAATACTCCTCTGCAAAAGTACATCGTTTATTAGAGGTTAAACGGAATATTGACGAACAAAAAACAATCAATGATTATACTGTCTTGGTACATGAATTAGATGGTTTAAAAGTTGAGATTATTAAAGGAATGTAATAAAAAGCGTCAGAATAGTTGAAAGAAAGTATCCTTATAAAGATGTACCCTATCAATTTATTAAAGGAAAGTCGCATC # Questionable array : NO Score: 8.93 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCTTACATAGGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 128815-129243 **** Predicted by CRISPRDetect 2.4 *** >NZ_MQTG01000001.1 Bacillus cereus strain MOD1_Bc71 Bc71_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 128815 32 81.2 35 ....T....CT.G.....A....A........ CAGGCTGCCGCTTAACGGTGTGGCTGGAGCGTTTA 128882 32 87.5 33 ..........TC..G......A.......... GATAAAGGGTTTGCAATCATTAAAGATATTGTT 128947 32 93.8 33 ..........G........A............ TATAAAAAAGAAGTATGTTGATTTAGTTAAGCG 129012 32 87.5 35 .........C..TA..A............... CGTAGTAGCACATATTTAAAACGCATATACGGACA 129079 32 93.8 34 ......T..........A.............. TAACAGTCATTTGCTTATGTGCATCTCAATTTAG 129145 32 100.0 35 ................................ CGCTAGCGCTACAAGTCTAAAGGAATTGTATGGGC 129212 32 75.0 0 T..AT....CTC.......T...........G | ========== ====== ====== ====== ================================ =================================== ================== 7 32 88.4 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : GATCCGATTGATATTACTAGTATGCAGATTACGAAAATTGTAAATTCTGAGCTGGGGAAGGATAAAGGATCAGATACAATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATCAATACACAGTTAGCAGAAAAGACAGGTTTTACTAACGGAGATGCGGAGAAAATTAAAAATGCACTGGTTACATTGTTTGAAAATGGTGTATCAGCAGCACGACCTGAAGGAAGTATAGAAGTACATAAAGCTTGTTGGTGGAAGCATAATTCAAAACTTGGCCAGTACCATTCCGCAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTGACGAACCAAAATAATTGATGACTATAACATTTCGGTAAAAGAATTAGATAGTTTAAAAGTGACGATTATTGATGGACCGCAATGAAGAAAACATTAGAATGATTGAAGGAAAGCGTATTTATTAAAAAGTTAATCAACCATTTATTAAAGAAAA # Right flank : GTGGTAAAACACTTATAGTATTTAATTATACCTTAACGCATTACCCAGATACTTTTTGACTATCACCCTTCACAAGCTTAAGGAAGTAGGATTCTTTTAGGTAAAGCGTTAACTTTAATTAAAACTTCTTGTAATATATAACATTATTATATAATATATAGGTATATTGTTAGTTTATTTGATTCCGTTTATTCCCACACCTTTTTTGTGTTGTGGTTGAGTTGTAGAAGCAAGTTGCGTCTTGTTTCAATTGTGAAAGGGCTTCTTTGAGCCGATTAGTGTATATATAGTTTTTTTGCTATGCACATTTTTAATCGACTTGAAGAAGCCCTTTTTGTGTTGTTTTCAAGTTCGCAGGCGGGGTTATTTATGATTAATAAAATAACAAATTAGAGGAGATATGAAAATGAATAAAGATTGTAGACACTTAAAATTAGTACCAACAGTAGAGGAAAATAAAATACGAATGGAAAATAAGCAGAATTCATATGCATCATCAG # Questionable array : NO Score: 6.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.42, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [10-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //