Array 1 1057127-1060327 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056321.1 Citrobacter sp. RHBSTW-00821 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1057127 29 100.0 32 ............................. TACGCGGAAGTAGGCCTGCAGCTTACGCTGGG 1057188 29 100.0 32 ............................. CCGGGTGAGTTGGCGCTATCTCCGGCGAGACA 1057249 29 100.0 32 ............................. GCGGCATATAACTTCGGCGGCTTGTCTCTTAG 1057310 29 100.0 32 ............................. GATATGTATTGCCCAGCCAAGCCGGTAACTAT 1057371 29 100.0 32 ............................. CGCATCATCACCTCAGACAAATACGCAGACGT 1057432 29 100.0 32 ............................. CATATTCACGGCATCGCGCAACGGTGTGCGCT 1057493 29 100.0 32 ............................. GTTGGCGAAGTTGTAGTAAATATCACTACGGT 1057554 29 100.0 32 ............................. CAGGAGTGTTCGACCTTGACGCGATCAGGAGT 1057615 29 100.0 32 ............................. GCTGGGTATTCCCTATACAGCAACGGAAACTA 1057676 29 100.0 32 ............................. GTTATTGATGTTCAGCCCGGTACGCGCACCCA 1057737 29 100.0 32 ............................. CCGCGACGCATACCAAACATCTTATTCACGTC 1057798 29 100.0 32 ............................. CTCGTTAAACTTGCTCTCCCATTGCTTGCCGA 1057859 29 100.0 32 ............................. CTGCCCCGTCTGCGTCGGGCGGGCAGGATCGG 1057920 29 100.0 32 ............................. TCCGAACCGGACAACTTGCGACAATTGGCGAG 1057981 29 100.0 32 ............................. TTTATTTATTGCGGTGATTTCAGTCGTTTCCT 1058042 29 100.0 32 ............................. CTTATCCACCCCGGTTATGATGGCCTTTAACT 1058103 29 100.0 32 ............................. CATGAGCCGCCCGGCTGATGGCGGACGTTTTG 1058164 29 100.0 32 ............................. CTGTATCACGTGATCGCCACGTCAACGCAGTA 1058225 29 100.0 32 ............................. GAAACGACCCGCGCGAATGGTGCGGGAATGAC 1058286 29 100.0 32 ............................. TTTCCCGTCCTAAACCTGATCGCGTTCTCTGA 1058347 29 100.0 32 ............................. CTTGAGCGTCCTGAACTATTTAGGATTTTAGA 1058408 29 100.0 32 ............................. TCAGGGAGTAACCGGGACTGGAGGATTCCAGA 1058469 29 100.0 32 ............................. GGGTACGTCGGTTACCCAATCCGAGGTTCGAT 1058530 29 100.0 32 ............................. CCCAACAGCAAATTCATGTAAATCAGGATTGC 1058591 29 100.0 32 ............................. AAAAAAACATGCAGAGGATTTCATTAAACATG 1058652 29 100.0 32 ............................. TTTCAACGTGCGTTCTGCAACTTGGCGGTCCT 1058713 29 100.0 32 ............................. TCTCACATGTTGTTAAATCCCATACTTTAGAA 1058774 29 100.0 32 ............................. CACTGGTTCATCCTGATCCCCTGCATGTTAGT 1058835 29 100.0 32 ............................. TCTTCTTGATTCCTTCAGGTTCTGAAGATCGC 1058896 29 100.0 32 ............................. AATTTTCAGACCGTTGATGTTTACGGTTCCGG 1058957 29 100.0 32 ............................. GCTGAATTCTGGCCTTCAAACGTGCAGCGAGA 1059018 29 100.0 32 ............................. AGCTGCCACTGCGGCAGCTCTTTCGCGTTACA 1059079 29 100.0 32 ............................. GCCGAGGCGATAGCGACGATGACGTTTGAAAC 1059140 29 100.0 32 ............................. AGAGAGTTTCACCGGCCGCTATATTCCCTGCG 1059201 29 100.0 32 ............................. CCCGGTACAAGGGCTAAGTTCTGCCGGCGTAG 1059262 29 100.0 32 ............................. CAATGGAAGAACATCTACTACCAGATTCTCGT 1059323 29 100.0 32 ............................. GGGGAGTGAGATGGGCAGGCCAGTAATAGCAG 1059384 29 100.0 32 ............................. GCGAGGGGGAATCGTGCTGGATTGTAGATATG 1059445 29 100.0 32 ............................. ATTAATGGATTGAATCCATTCGATCATGATGG 1059506 29 100.0 32 ............................. TTTCGGGGTCGAAGTTGCTGGGCGCGAATCGG 1059567 29 100.0 32 ............................. GCTGGGACATCATGTTCATAATTCAGGATGTA 1059628 29 100.0 32 ............................. TAAATTATTCGATATTAATAAAAACATGGAAA 1059689 29 100.0 32 ............................. GGCAAACGAGAAAACCCCTCATAATCGTTTCT 1059750 29 100.0 32 ............................. AACCACGCTGTCGAACGCCTCGCCGGTGTCGG 1059811 29 100.0 32 ............................. CGCCGGACCTCAGAGAACCGGCGCATGCATAC 1059872 29 100.0 32 ............................. CATTACAATGTACGCCAACATGGATCCTGTAT 1059933 29 100.0 32 ............................. GCTGACGGTGCGCCAGCGCCGGTAGTTCCAGG 1059994 29 100.0 32 ............................. CGGCTCAGAAACGGCTACTGCGACCGTTAGAG 1060055 29 100.0 32 ............................. CTCATAGTATTAAGCATGAGATTGACACAACC 1060116 29 100.0 32 ............................. AATCCTGCGTGACGCCGGACTTTCCCGCACCC 1060177 29 100.0 32 ............................. GAAAAGTACAACCAGACGAAAGAGGCGTTTAA 1060238 29 100.0 32 ............................. CGGAGGACGCGGCCAAAATTGCTCGTAATAAT 1060299 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================ ================== 53 29 99.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATTGATTGAAGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAACCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAATTTTTTCTACGGCTATAACCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGGAGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //