Array 1 201782-199984 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGUK010000004.1 Klebsiella variicola strain 5012STDY7312728, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 201781 29 100.0 32 ............................. GATTTCTATTACACTTTTTATACCTGTGCGAA 201720 29 100.0 32 ............................. ATCTATTCCAGCATCGAGTTGCACCCGCAATT 201659 29 100.0 32 ............................. TCGTCATCAGAAATACTGGCTGGCATTGTCGT 201598 29 100.0 32 ............................. CGCGATATATGGCGTGCTGACCGGATGTAAAA 201537 29 100.0 32 ............................. CGGCACCGGCTCATTACTGGGGCTCCGGTGAG 201476 29 100.0 32 ............................. GAATTGTTACGGTCAGTGTCCACACAGTGACC 201415 29 100.0 32 ............................. TGCGATCCAAACTCTGCAAAGCGCGCGCGTTT 201354 29 100.0 32 ............................. CTGCTCCCGTTCAATGGCGGCATCGATGCCCT 201293 29 100.0 32 ............................. AGTCTGGCGGAGTATCAGCAGCAGCATCATGT 201232 29 100.0 32 ............................. TTGTAGATCTGACTCGCGGATAAACTCACTTG 201171 29 100.0 32 ............................. AGGTTGAGCTGGGCCACGCCCTGACTGTAGAA 201110 29 100.0 32 ............................. GTATCCGGATGATTGGTACGGTGCATGGCCAC 201049 29 100.0 32 ............................. TCTGCCGAGGCTCTTGGCGGGGCTACCCTGGA 200988 29 100.0 32 ............................. CATGCGGTTGTTGGCGCGTTTCTGGCTAAACA 200927 29 100.0 32 ............................. GCGATGAAATAGTTACCAACTTCAACTATGGT 200866 29 100.0 32 ............................. TCGTTATTCGTCATTTTGGTTCCATGGCCAAT 200805 29 100.0 32 ............................. ACCATCAAATTCAAAATCAATTACTACCAGCA 200744 29 100.0 32 ............................. GATTGGTTCTCAGGGCTGGATGAGATTGTGGC 200683 29 100.0 32 ............................. CACAAACGACTGTCAGCGGCCTGATCTCATAA 200622 29 100.0 32 ............................. CAGTCGAGCTGCGGATATACGCGCCCGCCCTT 200561 29 96.6 32 .............T............... GCTCATGGGGGGACCGATGACGATTCGAACCT 200500 29 100.0 32 ............................. GAACTCCGGTATGATTGCTCCAATATTTGCAG 200439 29 100.0 32 ............................. CATGTCAGCCCCTCAATGTTATAGCGCTGCTG 200378 29 100.0 32 ............................. ATGATCTGCCACCGAAAGATTTCGCATGCGAA 200317 29 100.0 32 ............................. GGCAGGCCGTCAATGTACTGTCCGACGCCAGT 200256 29 100.0 32 ............................. CTGGCCTTTTTGATAGTGCAACTCAGGTTTAA 200195 29 100.0 32 ............................. GGTTGCGACATCGCGCCAGGTATTAATCACGG 200134 29 100.0 32 ............................. ACTACGAGCTAACCGGTGAGGATGAGTTCTGG 200073 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 200012 28 82.8 0 ...........AT..-.........G..C | T [199999] ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGATGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : GCAACTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGTGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGGTAAACGCCTGGGCGGCGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAAATCCTCGCTGATAATGTCATCACTAGACTGCTGGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //