Array 1 33061-31573 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRJB01000004.1 Lactobacillus sp. wkB10 wkB10_contig004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 33060 36 100.0 30 .................................... TTGGTGCTTAGTAATTATGCAAACACAGCA 32994 36 100.0 30 .................................... TAAACTTAAACCGTTTGCGATAATAAATGC 32928 36 100.0 30 .................................... TTAAAGAATGTAAGGCAAGCCGACGGGGGC 32862 36 100.0 30 .................................... TTTCATTAGGATTGTGAAAGCTGCCGTCTG 32796 36 100.0 30 .................................... AGCGCAGACGCAATTAATGCCGTTGCAAAC 32730 36 100.0 30 .................................... CGTAGCCATTAGCTCGTGGCTGTCTCAACC 32664 36 100.0 30 .................................... ATAAGTATTGAAAGACAAGCTTACGGTTAA 32598 36 100.0 30 .................................... TTATCTTGCTCCTTTAGATAGCAATAATTT 32532 36 100.0 30 .................................... TAATTACCTTTACAGAAGGCAAAGACTATG 32466 36 100.0 30 .................................... AAAATTCTACCAGGATGTTCCTTATCAAGA 32400 36 100.0 30 .................................... AAACGACAACGATTAAAATGTTTCAGGACG 32334 36 100.0 30 .................................... AATCAAGACTAGTTTGGGACAGGTAGGACA 32268 36 100.0 30 .................................... GTCGGCAAGGACAAATATGGCAAGGCAATG 32202 36 100.0 30 .................................... TAATACCAGCACAAACATTGGTAAATACTG 32136 36 100.0 30 .................................... AGTTAAATCTTCATCATCATAGTCATAAAT 32070 36 100.0 30 .................................... GAACGATAAGCAAGGGGTTGCCTTGTTAGG 32004 36 100.0 30 .................................... GAAATTGATAAAACCATTGTTCAGGGGGGA 31938 36 100.0 30 .................................... TTATTGTTGTTTGACAGTGCCTTGATGAAG 31872 36 100.0 30 .................................... TGCTAGGTAGACTTTTCATTCTTGAGCATG 31806 36 100.0 30 .................................... ATAAATGCTGGGCTGTGGGATGCGCCATTA 31740 36 100.0 30 .................................... TTAAAAGGCAATGAGAAAGCAACTGATTAC 31674 36 97.2 30 ..........C......................... AATAAGCAGGGAATGCATAACAATCTCAAG 31608 35 77.8 0 .......A..A.............T.A.C..T-..T | C [31581] ========== ====== ====== ====== ==================================== ============================== ================== 23 36 98.9 30 GTTTTAGGTGGTTGTTAGATCAATGATGATTAGAAC # Left flank : AGTGGAGATATCACTAAAAAATATATGCCTCATATTGTAAGTAGTTATCTAAAAAATTTAGATGAAGAAAATCGTAATAAGGTGATTAAGTCTTTTTATAATTTAGAATCAACCTTGCAGGATTCACTTTTACTTGAAGATTTACCTTTAGCAATTAATTTTGATGAAGACTTAAAAAAATTGCTTAAATTTACAGAAATTCATTTTGATGAATCAATGCTACTCAGTACATATGGTATAATAGAAACAGTTTTAAAAATTCACCAGACGTGTAATTTAAAATCAATTCCTGTTATTTGTAATGTAGCTCATTACTTGGAAGAACAGGAGTGGCAAGAGTTAGCTAGTCTTGTTACAGAAATGAATTTAATTTTGGTTGTAATTGAATTCACGACAAAAGAAAATTTGGCAATATCTAAAGACATACCTTTTTACTATATCGATAAGGATCTAATCGATTGGTACTAGCATCAAGATTAAAATCAGATTATAAAATATCG # Right flank : ATTTTAAGAAATTGACACTAATTAAAGAAAGGCTGCTATTTGTTCAAATGCAAAACATACTAAAAAGTAACAACAACAAACTATACCTTTTGTCAGTGATCACCGATAACTTGGGCAGCTCTTTAATGTCATTTGCGTTGCCGTTGATGGTACTTGATATCACTAAAAATGGTATTCACTTATCAGTAATTTCTATTATTGAAACATTGCCTATTTTGGTTTTAGGTCTTCCGGCAGGTGCTTTAACGGATAAATTAGATGTTAAAAAGATTCTCATTTTTAGTGATTTGATTAGATTAATCAGTTATTTGGTTCTTTCGGTATCATTTGCATTCCAGCTAACCGTGAATTGCATGATTTTAATTATTTATGCGGTATCACTTGTCGTCAGCGTGACAAACACAATTAATACGGTGTCAGAAATTACTTTTGTTTCTTTTTTAGTAGAAAAGAAGGATTTTTCAGAATTAAACAGTCTGGTTTACGGCATACAATATGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGGTGGTTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.40,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //