Array 1 27687-25221 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWRB01000001.1 Corynebacterium diphtheriae strain 47/F Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 27686 29 96.6 32 ............................G CAATGAAAGCCCACACCCCACCCCATACCATC 27625 29 100.0 32 ............................. TTCCCTGAGTTCAGCAGCCCGTGCATCCACGA 27564 29 96.6 32 ............................G GAGAAGAAATGACCAGAAAAGATAACCGAAAA 27503 29 100.0 32 ............................. AATCAACGCGACGGCGCGACTACCGCGGGTAG 27442 29 96.6 32 ............................G TTTACCGCCAGTATTCGCGCCACCGTCGCCGC 27381 29 96.6 32 ............................G CATGGGGGGGTAGGCGGGCGCAAAAGCTGGTG 27320 29 100.0 32 ............................. GCCGCGGGCACGTTCATAGCTCGGGCACAATC 27259 29 100.0 32 ............................. TCTCTGTGGTCGCGAATATTCACACCGAATAC 27198 29 100.0 32 ............................. GCGAGCAACCGGCATGCCGGCAGCGTCGACAC 27137 29 96.6 32 .....T....................... GAGAAGCTATCTTATGGGCGGAACGCTACGCC 27076 29 100.0 32 ............................. CGTCGTCTCTTCTTCTGCTTCCACCTTTACCG 27015 29 96.6 32 ............................G GGGGTGGAGAATCATGGCTAAACGTGAGCTTC 26954 29 96.6 32 ............................T GGGAATGTCACCGCGCTTACCCCTCCACACAG 26893 29 96.6 32 ............................G TGCAACCCTGCCGGCCGCTGAGGCTGCTAAAA 26832 29 100.0 32 ............................. ACCGCAAATAACCCATAGGGCTGGCCACTTGG 26771 29 100.0 32 ............................. ACGGCAGTGGGTGCATGTATCCCCACTGGGGG 26710 29 100.0 32 ............................. GCCCAAAAGTCCGGCCTTGTCCTGTCGCTGGA 26649 29 100.0 32 ............................. GCCCAAAAGTCCGGCCTTGTCCTGTCGCTGGA 26588 29 100.0 32 ............................. AAGACACCTATTATAACTGTTGCCCCGCGTCT 26527 29 100.0 32 ............................. CGCCGCAAAGCCACACCCCTGGTGAACGCAGC 26466 29 96.6 32 ............................G CGGATTGAGGTGGTCTCGAAGCTGCCATCCAG 26405 29 96.6 32 ............................G CTTAGCGCCGCTCGCGCCAAGCTGAATGCCGC 26344 29 100.0 32 ............................. CTGCAAGTACTACCTCGGAATCGTCATGCTAG 26283 29 100.0 32 ............................. GACTCTCTCCGATGAAAACAAGGACGCATCGC 26222 29 96.6 32 ............................G TCCACAGCGAAAAACACCGGATGGGTCGGGCA 26161 29 96.6 32 ............................G TTTCGAGATCAAAACATCCCGTTCTTTCAGCT 26100 29 100.0 32 ............................. TGGGAATGGATGGCTTTTACGATACAAAGGCA 26039 29 96.6 32 ............................G GAGACTATCGCCTGGAGAGTCCAGTGTGATGG 25978 29 100.0 32 ............................. GCACCCCCCACTACGTGGCCACCATCCTAGGC 25917 29 96.6 32 ............................G CCCAAAGGCGGCAACAAATCGACCAGTGCAAC 25856 29 96.6 32 ............................T AGGGCACCGATGGTCCGACTCGAAACAAATGA 25795 29 96.6 29 ............................G TCTTTTGTCAGGAAACCAGCCGAGGTCGT 25737 29 100.0 32 ............................. CAGCAACCCGTCCCCAGATCGACCGCTGTCGT 25676 29 100.0 32 ............................. GATCACCGGCTAGGAATCCAATAATCACCATG 25615 29 100.0 32 ............................. CGCGTCGAGATCGTCGGGATCAACATCAGGAC 25554 29 100.0 32 ............................. AAGCGTATGGGATGGTCAGCAGTTCTGGGACT 25493 29 96.6 32 ............................G GTTAAAGAGCTAATCGGCATAGACTTCGACGA 25432 29 100.0 32 ............................. CAGCCCAGCCAAAAACGAAGTCGACGAAATCG 25371 29 100.0 32 ............................. ACATGGCGGGGCCTATATGAAAGGATCGTTAC 25310 29 100.0 32 ............................. ATTGAGGGACAGCTTAAGGCCCCATCTACCGC 25249 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 41 29 98.6 32 GTTTTCCCCGCACCAGCGGGGATGAGCCC # Left flank : CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGCCTGCCAGCCCGAATGACACGCAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCGTAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT # Right flank : AGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGGATCTGTGTTTTCATTCAGAGAAATCAGTAAATGATGGGTCTACTAAAAAATTTTGAAAAAATTAACTTTTAATATCTATAAGGTGTATTCTGTGGAGAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCAGCTCAAGATTATGCTGTGATGCGGCTTTTGCTGGCTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCGTCTTGCTCGAAAAAGGAAAGATCAGG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.94, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACCAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //