Array 1 257598-255967 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK074162.1 Legionella pneumophila subsp. pneumophila strain ATCC 43130 Scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 257597 37 100.0 36 ..................................... GGGGATACCAACGATCTAGAATTTTTTGTACTTTAA 257524 37 100.0 36 ..................................... CACCATAGATGTTACGTTAGATCAAAGTCATTTAGG 257451 37 100.0 35 ..................................... AAAAGCTTGGGTCTGGCAACTTGGCGAGCAGTATG 257379 37 100.0 35 ..................................... TAGTAATACATCCGGCCCATTATGTCACAAATAAT 257307 37 100.0 36 ..................................... GTTTGTCACTCGCGGCACTCCTTCATTGTCGTAGTT 257234 37 100.0 35 ..................................... TTACATCTAAGGCAGTCTACCCCAGTACACGGTGA 257162 37 100.0 36 ..................................... CACTAGTTATGATTGACTTAATAGATAGTTGTATAA 257089 37 100.0 35 ..................................... TGTCTGTAAATTGGGTAAAAAAGTCTTGTATTGTT 257017 37 100.0 37 ..................................... TCTAAATTCGACAAAAATAACAAAAAACAAATTTGGA 256943 37 100.0 35 ..................................... AAAATTGTGTTCCGCTGCTCGACAAAATTATTTAA 256871 37 100.0 34 ..................................... GGTAAGTAAAAGGTGAATTAATACCATAAATGCA 256800 37 100.0 34 ..................................... TGGGACTGTCCATCCATAATCAATTGGGCCAATT 256729 37 100.0 37 ..................................... TTCTACCGATATTTCCCACTATACCTATATCATAAAG 256655 37 100.0 35 ..................................... TTCGAAATTAGTGTATTAGTCATAGCTAATAGTGT 256583 37 100.0 37 ..................................... GACTTAGTAGAAGAGGAAACTAGAGGAAAAACTAAAT 256509 37 100.0 33 ..................................... CACTTAGAACATAGCTTTGATTCTGTTGGTGTG 256439 37 100.0 34 ..................................... AGACATGCTAATCCTTTTAGGCCATATCAATGCC 256368 37 100.0 36 ..................................... ACAAAACTAGTCAAATGCCCCGCACCAGACATGGCA 256295 37 100.0 36 ..................................... TTTTTATATAATAATCCTATTCTGCTAGGTTTAATT 256222 37 100.0 37 ..................................... ATCCTGTAATATTGTCGAATACGTAATTAATCTCAGG 256148 37 100.0 36 ..................................... ACTTAGCCTCAATTCCCAAACCTCTGTGGCCGATAC 256075 37 100.0 35 ..................................... ACTTTATTAGATATGACTAATATATTAATAGCCAA 256003 37 81.1 0 ....A......C...........TT...T.A.....T | ========== ====== ====== ====== ===================================== ===================================== ================== 23 37 99.2 36 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCCTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTATATAATCAAACTGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCTGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATACCTCAAAACTTATGGTCGTTGGATACCGGATAGCTCTTCTCAATCAGATTATCATCCGATGCATGATTGGAGTCTTTATTTAACAACCCCGCCCAAAATAAACCAAATTATATTAAAATTGAACTTTTAATGTGGTATAATCGCGAGTCTAAATTTATGCACACCTATAGTGGAATTTCAAATGAAATATATTTTATTGCTGCTATTTAACATCAGCTATGCTCCAAATCATCCTGTAGTGACAACTAGTCTTGAATTTAGTACCCAGCAAGCCTGCAAAGACGCAGGTAAACAAGTTCAAGAACTCACAAGAACCCGTAATGGCTCTGCAGTGCCCGATTTTATTTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //