Array 1 25064-22032 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIWVG010000010.1 Acinetobacter baumannii strain 13A297 ctg_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 25063 30 93.3 30 ............................GA ACGAAAGTAATACGATTTTACGTTCAATTC 25003 30 96.7 30 ............................A. CTGCCCCTGGCGATCCTGTAGCTGTAGGGG 24943 30 96.7 30 .............................C ATCATTTAGCTTTTTCTTGAATGTCTTAAT 24883 30 93.3 30 ............................AA CTCTACAGCTAATAAGCTTAATGAAGTCGT 24823 30 96.7 30 ............................A. AACGAGAAGCGTTGCGTAGACTTACAACTC 24763 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 24703 30 96.7 30 .............................G CAAGAATTGAAACAATTCAAAAGGTTGCAC 24643 30 93.3 30 ............................GG TGCGCTTGATACAGCTTATACTGAAATTCA 24583 30 93.3 30 ............................AG CAAAGACAGGTTTAGAAGTCACCTGATATT 24523 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 24463 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 24403 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 24343 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 24283 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 24223 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 24163 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 24103 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 24043 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 23983 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 23923 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 23863 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 23803 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 23742 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 23682 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 23622 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 23562 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 23501 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 23441 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 23381 30 93.3 30 ............................CA CTGTATCTAACCCGTCGTGTTGATAAGAAA 23321 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 23261 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 23201 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 23141 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 23081 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 23021 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 22961 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 22901 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 22841 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 22781 30 93.3 30 ............................AA GAGAACGAACGAAAGTTCATGGACATGTTG 22721 30 96.7 30 .............................A AATGTGATTATTCAAGATAAGCTAGGCAGT 22661 30 90.0 30 .........A..................GA CCAATGGAGCACGATAACCCCATGGTTTAT 22601 30 96.7 30 .............................A AGTTAATTAAGGGTGTGGCTATGGTTGCAG 22541 30 93.3 29 ............................AA AATCACAAATACATAAATCATTTTTTATC 22482 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 22422 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 22362 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 22301 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 22241 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 22181 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 22121 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 22061 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 51 30 95.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //