Array 1 2277615-2273676 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046654.1 Acinetobacter baumannii strain ATCC 19606 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 2277614 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 2277554 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 2277494 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 2277434 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 2277374 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 2277314 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 2277254 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 2277194 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 2277134 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [2277083] 2277082 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 2277022 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 2276962 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 2276902 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 2276842 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 2276782 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 2276722 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 2276662 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 2276602 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 2276542 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 2276482 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 2276422 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 2276362 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 2276302 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 2276242 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 2276182 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 2276122 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 2276062 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 2276002 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 2275942 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 2275882 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 2275822 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 2275762 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 2275702 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 2275642 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 2275582 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 2275522 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 2275462 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 2275402 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 2275342 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 2275282 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 2275222 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 2275162 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 2275102 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 2275042 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 2274982 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 2274922 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 2274862 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 2274803 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 2274743 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 2274683 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 2274623 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 2274563 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 2274503 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 2274443 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 2274383 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 2274323 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 2274263 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 2274203 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 2274143 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 2274064 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [2274039] 2274004 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 2273944 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 2273884 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 2273824 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 2273764 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 2273704 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTAA # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [75-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //