Array 1 1852-3067 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIW01000003.1 Clostridium botulinum strain SU0305 Cbot0030o-SU0305_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1852 29 100.0 38 ............................. GATTCATTATTCGCCATTGCTTATCACCTCGATATCAA 1919 29 100.0 37 ............................. TCACTTTCGCACCCTCCCTGCTGTATTGGTGTATATA 1985 29 100.0 37 ............................. ATATAGCTTTTAATCTGTTTTTTAGAATCATAATCAA 2051 29 100.0 35 ............................. CTGAAGCCTTATAACGTTCCCTAAACTCTGTATCA 2115 29 100.0 35 ............................. ATGGTCTTATATTATTATGAGCTTCTAAAACTAAA 2179 29 100.0 37 ............................. CCGACTTGTTGTTTTAGTTCTGCAAATATATATATAG 2245 29 100.0 35 ............................. TTTTTAGGGAATCTATTAATCTTAAACTCTCTTGG 2309 29 96.6 37 ...G......................... CATTGACCTATTACATATTTATCAAGTTCTTTAACAG 2375 29 96.6 38 ..............A.............. TAGCTTATTGATTCGTATTTACTAGCGATTGTATTAAG 2442 29 93.1 37 ..............AG............. TTTCCACCTAATCTAGTAATACCGTCTACATCAAAGG 2508 29 93.1 37 ..............AG............. TTTAATCTATTAATATAAACTTTTCTACTTTGAACAG 2574 29 96.6 36 .......A..................... GCTGTAATGTCTGTAGTGTACTCCAAAGCGTAGTTG 2639 29 100.0 38 ............................. ACTTCTCTTTGTAATTCTGAAAGAACAAAGGCATTTCG 2706 29 93.1 36 ..............AG............. TTTATAAGAACCAATTTTCTAGCTTGTATCTCTTGG 2771 28 96.6 37 ................-............ CAATAAGCTCCTGCTAAAGTTTTACCTCTTAAATATG A [2785] 2837 29 89.7 37 ...........T..AG............. TATTTATCCACTTTATTACGTTCTACTAACCATTTTG 2903 29 96.6 38 ..............A.............. CAAATTTTATCTATATGATTTAGATTAACTCTTTCAGG 2970 29 96.6 38 .......A..................... TGTACTGTTTGATTAATGTTGTCTATCTGATTTTCAAG 3037 29 89.7 0 .......A......A.............A | TA [3060] ========== ====== ====== ====== ============================= ====================================== ================== 19 29 96.8 37 TTGAACATTAACATGAGATGTATTTAAAT # Left flank : CTAAATCAATAGTAAATGGTGTTTTAGGTACATCTTCAAATGTAACACCTGCACCAAGCGAACCAACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGTACAATAAATACCCCAAGCGGTGTAAATATTAGAGAAAAGAAATCTACATCTTCTAAAATATTAGGGGCTTTACCTAATGGTGCCAAGGTTAATTTATATCGTAAAGAAGGAGATTGGATACATATTTATTATCCACCACATGGGGGTTATGTGTATGCTAAATATATAAGATATTAAATTTAAAAGGTAGTTCCTTAATTGGAACTACCTATTATTTTTCCAACCTACTTTAATTTTAAAACCTATCTTACTCATTGCTATACAAGGGCTTAGGATAGGCTTTTTATATAAATTTTAAATTATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATACTTCTATGTTATCCTTAAAAATAAGGAATGGCTATTTTACTATGA # Right flank : AATGGTAGTTGTAGCTTATGCTATAGCTATTATTTTTTTATTTTTTATTGGGAAAATTATTGTAATTTATATAAATGTTTCATAAAAAGGTATTGACTTCTTATACTACACGTAGTATAATTATAATTGTAGGAAGGAGGTGAAATAAAGATGGTTGATAAAATTGAAAAAGTCGGTAAAGTGGTGGAAGCACTTACCGACTTGGCACTTAAAATAGGCACTTTACTAGCAGTCATTAAAATGGTGCTAGATAGCCTAAAATAAACCCATAGGGAGGGTAAAACCTCCCTTACTAATAAAATATCACATTAACCATCTTAATTCAACATGAAAAAAAGTTTAATAAAAGAAGCTTTAAGACTAGTAGGTAGTATAGCCTGGTTAATCATAATAATTATTGGCTTAATAATCCTAATAGTGAAAGGAGTATTTTAATTATGAATGATAAAAAATCACCTCAAACAATAGCAAATCAAAATTGGGAGAAAAAAAATAGAGAG # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 448558-448199 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIW01000003.1 Clostridium botulinum strain SU0305 Cbot0030o-SU0305_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 448557 30 100.0 36 .............................. TGATGAAAAATAATTATGCACCTGGATATTTAAGAA 448491 30 100.0 35 .............................. AAATTTATGGATCTAATACTCATAAAGATGATTTT 448426 30 100.0 37 .............................. TTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCC 448359 30 100.0 36 .............................. AATGTTAAAACAGTTACACCAGCTACAAGACCAAAG 448293 30 86.7 35 G.....T.G.......G............. TGGCTTCTTATTGCCTGTTGTATCTTTTCTGGTAG 448228 30 80.0 0 .....G..C...G..AG............C | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 94.5 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATGGTCGAACAGTAACATAAGATGTATTTAAATAGCATATAATCAATTTTCTTACCCTTTTCAGTATGTCGAACAGTAACATAAGATGTATTTAAATTAATAATTTCATTCCTGGATCTAATTTTTGTATTAGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAATTAAAATCCATGATTTTTTCTCTTTAAAGTTGTTTAGTTTTTAGAGCAGCGTTGATAATATATCAATTTTTAAGAGAAGTCATTTTAGACTTCTCTTAAGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTTTCAAATGTACCCTTTTCTATGTGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACGATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACCGTATTGTCAGGAGATATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGAACTACTTTCATATGTCCAAATAGTTCCACTTCCACTTAATTTCAACTTCCCTTTATATATTCCAGATTCTATGATTTCATCACTTTTATCTAATCCAAAAGTATCATATA # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 448970-448813 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIW01000003.1 Clostridium botulinum strain SU0305 Cbot0030o-SU0305_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 448969 28 100.0 36 ............................ ATAGCATATAATCAATTTTCTTACCCTTTTCAGTAT 448905 28 100.0 37 ............................ ATTAATAATTTCATTCCTGGATCTAATTTTTGTATTA 448840 28 96.4 0 ..T......................... | ========== ====== ====== ====== ============================ ===================================== ================== 3 28 98.8 37 GTCGAACAGTAACATAAGATGTATTTAA # Left flank : AAATAAATTTGAAATTATTGTTAATGAAGATGAAGTAAGCCAAAGAAAAGCAACTATAGCTTTAGGAATGGGTTTAGGTGAGAAAGGAAGCAGTTTAGGTGCAGGATTTTGTATTTACAGATAAACTTTAAATAGGCGTTTATTTATTATTGTTGAACCTTAATATGGGATGTATTTAAATTTTTCTTAACTTCCTTAAATGCTTACATATTCTTTGATTGAATATTAACATAGGATGTATTTAAGCAGAGAACCCAAATCTATGATTTGGCGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTTATAAATTGAATTTTTTCAGGCGTAACAAATTTCAGAACCTATTCTAGTCATTGATATATAAGGGTTAGGATAGGTTCTTGTTGAGAATTTTTCGAAAAGTAAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATG # Right flank : GCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATGATTGAACATTAACATGAGATGTATTTAAATTGATGAAAAATAATTATGCACCTGGATATTTAAGAAATTGAACATTAACATGAGATGTATTTAAATAAATTTATGGATCTAATACTCATAAAGATGATTTTATTGAACATTAACATGAGATGTATTTAAATTTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCCATTGAACATTAACATGAGATGTATTTAAATAATGTTAAAACAGTTAC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGTAACATAAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //