Array 1 511033-513506 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ970760.1 Streptococcus oralis strain DD24 scaffold00002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 511033 36 100.0 30 .................................... GAAAAAGTCGTTTTATTGTTTCTAGGATTG 511099 36 100.0 29 .................................... ATTGTTTGACAGCGGGAATGGCAGCTATA 511164 36 100.0 30 .................................... TGAGTTTTTCATCGTGTAGTTTATCCAGCA 511230 36 100.0 29 .................................... AGTGACTGGCCTTGTCGCTAAGGAGTCAA 511295 36 100.0 30 .................................... TCATCAGTGAGGCTAGGGTTGTCTTCCATT 511361 36 100.0 30 .................................... TAAAATATAACAAAGTTGACATCTCAACCG 511427 36 100.0 30 .................................... TTAAGTTGTATTCAGGATTTTAAATTCCTA 511493 36 100.0 30 .................................... TGTTTGTGTCCTGTAACGATGAGTTTTGGG 511559 36 100.0 30 .................................... CGATGATACAAATCATAAGACAAAGCGCCT 511625 36 100.0 30 .................................... TATAACCCCTTTTAAGCCATTTCTCAGCTC 511691 36 100.0 30 .................................... AACTTTTTTCAAATTCTAACCTCCTTTCTA 511757 36 100.0 30 .................................... TTGATTAAACAGGCTAAGGCTTTGATGGTA 511823 36 100.0 30 .................................... TCTTTCTTTCTGATCACGTTTCATCAATCC 511889 36 100.0 30 .................................... CTTTAGCAATCAAACCGTATTTGGTAGCTA 511955 36 100.0 30 .................................... CGTTGACAAACTATCCAGAGGTCTTTATAA 512021 36 100.0 30 .................................... TTCGTTCCATTTACAACACTCCCATCTCTT 512087 36 100.0 30 .................................... AAGTTGAGGAGGTGGAGTGATGTCATGTAG 512153 36 100.0 30 .................................... GCAGCAGCAGCAACTTCTTCATAGAGCTTT 512219 36 100.0 30 .................................... TTGTGAATGGAGTTGTAGCATTCCAGGTGG 512285 36 100.0 30 .................................... AATGGCAATCGTCTTGGTGCTAAATGATTT 512351 36 100.0 29 .................................... TGAGTGAGTGTAATACTCATCACCATTTT 512416 36 100.0 30 .................................... AATCTCTTGCAGAGGTTGCTTATACTGACC 512482 36 100.0 30 .................................... TGTTAAAACAAAACATTGACCTTTCTAATA 512548 36 100.0 30 .................................... TAGGTCTGGGCGCGGCACAACAATTAGGTA 512614 36 100.0 30 .................................... TTCATTTTTTTACTCCTTTAATTATTATTT 512680 36 100.0 30 .................................... GTGAAATACATGACAGTCGGTAGGTAAGCT 512746 36 100.0 30 .................................... TCGATTTTAGCAAAGCATGTATCTATAATA 512812 36 100.0 30 .................................... CTGATACTGTAGAGGTAAGTTTGGCAGGTG 512878 36 100.0 30 .................................... AATTCCATTGATCATTCCTAATGTCGTATT 512944 36 100.0 30 .................................... AGGTTCAGAAGGAAGAAAAAGGCAATCTCA 513010 36 100.0 30 .................................... ATTCACGTATGGAAGTTGTTAAAGACGTGG 513076 36 100.0 29 .................................... CAGCTGAAACAGCGTACTTTGTGCCAACT 513141 36 100.0 30 .................................... TCTGACTTAGAAAAAAGAAAAACCGCAATC 513207 36 100.0 30 .................................... TTCAGCATATCTTCATCTGCACTTGCAGAT 513273 36 100.0 30 .................................... GCAAAGAGATTGGTTCTTGGACGTGCAATG 513339 36 100.0 30 .................................... ATGGTGCTAAAAGAGCTAAGAATTATGTTA 513405 36 100.0 30 .................................... GTAAATCTATGGCTGTTATGCGCGGACTCT 513471 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 38 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATGACTATCTATCCTATAATGAGTTTGTTAAGTGTTGCAAAAAAATGGAGTTTCTGACTAATCATAGCGATTCATTATATATTGTTTTATTTCCTTCCAATGAAGGCTATCTTCATGTCACAAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGACCATTTTTATTCGTTAGATTTTATGTATGGTCGTTTTATCAATCAATATCCAATAAATCAAATACCTGATGAACAAGACTTTTTAACTTCTTTAAGAAAGGTTGGCCCCTATTTATTTAGTTCTGACATTCTTCATATGAGTTTATCTGTAGAAGATCAAGTAGCATTAAAGATTTTAAACAAATTGTATCAGTATGAAATGAAAACAAAATTCCGTATTGAAGCGGTCAATCCAATGTTATTGAAATATTTGAAAGAATAGTATTGACGAGTGAGATTTAAGGCTTTATAATACTTTTGAGGGAACAAAAATCAAAATTGACGAATTTGAG # Right flank : CTGGCTTAATTGGATCCAGGATCAGCAATCGGAGCGGAAACTCTCTTTTTAATTTCTTATAGATTAGCTTTCCAGTATGATATAATGTCATTGAGTAGCAATCAGAGAATAAAGGAGACGAAACGATGCTAGCTATTTGTATTGATTCTATAGGCGACAAGTCAGGGACCTATAAGTTGTTAAGAAATTATTCATCCTTGCCTTTTTTTCTGATTCAAACCAGAATAAACAATCATGATACGGTCATGGAAGTGGATATTCTCGATCTGGATGAATTAAAAAAGGTTAGAGAATTAATCGGTCAGTTAACTGCAATCGGGACTATGGTTACGATAAGAGATTCGACCGGTATTATCAGTTTAGAAATACTAAATAATATTATTTCCACCTTTGAAGAGATTGCTACTGAGAGAGAAGAATTAGATGCTCTGATGTTTGAGGAGGAAGAGTGATTTGTTTTGCTAGTTTCTAAAGGTAACTCGTTTGTGACGAATTCAATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //