Array 1 79747-80842 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRBX010000007.1 Lactiplantibacillus plantarum strain FUA3302 NODE_7_length_135755_cov_14.399704, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 79747 36 100.0 30 .................................... GGCTTTTTAGCCGTACTAGGAAGATGACTA 79813 36 100.0 30 .................................... AAGAAACACTAAACACAGGGTTCTATTGAG 79879 36 100.0 30 .................................... AAGTAGTCAAGAGAGTTCCGAGGTCAGGTT 79945 36 100.0 30 .................................... AATTGGAAATGTGAGTGCATCCGCTGCATC 80011 36 100.0 30 .................................... CTGAAAGATTTGGCGCGCGTGACATTATCA 80077 36 97.2 30 .C.................................. AAACGTCTTTAGCGTAGTCATTCATTGGCT 80143 36 100.0 30 .................................... AAACACCGTTAACGGTCTTACCGTGTCGAT 80209 36 100.0 30 .................................... TAAGTACGTTGACGAACCCCCGCAAGCGTT 80275 36 100.0 30 .................................... TGCACACTCAGCGACAAAATCATTACGCAA 80341 36 100.0 30 .................................... TATTGAGTGCAGCGTTGTTTGCGAGCGTCC 80407 36 100.0 30 .................................... GTACAGTGTCGCTCAACGTCTATCACTCCC 80473 36 100.0 30 .................................... CTTGCGGGGCGTCTGATGAGCGCGATAAGG 80539 36 100.0 30 .................................... TAAAATTGTTGAAACCGTTGGGACAATCAG 80605 36 100.0 30 .................................... ATTACTCGTGCGGTTAATGAAGAAGTTCCG 80671 36 100.0 30 .................................... GGTATGGAGTACAACAAGGAACAAGACACG 80737 36 100.0 30 .................................... GATGCTGAGGAAACGAAGCATAGAACGTTT 80803 36 83.3 0 ...........CG.C..C.........T..C..... | AA,C,T [80824,80837,80840] ========== ====== ====== ====== ==================================== ============================== ================== 17 36 98.9 30 GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Left flank : CAGTCGATTTGAACCGCCTTTTTCTAAAGAAAGTGCAGACCCAAATTATCAAGTTAATGGCTGATGATCGGCAAGTAGCGGTCTTAGATGAAAATCGTAAAGTAGTTTCGCAAGTAATGGAAGCCAGCTTCTTACTAGACTTACCGCTAGATGTTGACGAATCGCCTAGCCTAGAACAAATATTGAAATTTACCGGTGTTCATTTTCCAACGGAGCTTATGAATGACCCAAGGGCAATACTGGAGGCACTCGTTCAGACGCATGTTGAACTGGGTTTGAAACAGAAGCTGGTGTTGACTAATGTCAGCCATTACTTAAATCAAAAACAATGGGCGAGCTTTGAGCAACTAGTGCATGATTTGGGCGCAACTGTCATTGTTATCGAATACTCAGAAATAAATCGAATGGAAAAGTTCAAAAATAGTTGTTATTATTATGTTGACGAGGATTTAGTAGACTGGCGTGATATGAATTAATGAGTAAATGATGTTAAAATGCTG # Right flank : CTAAAAAATGGCTCACCAACTAAAACAGGTTGGTGAGCCATTTCTATTTATTGACTAATTACTAATCAATCACGCCATCTTTTCCCATCCATCGGAACCGAATAAACTTCCCGACCTCGGTCACAATCAAGACGACGATCCCACAGATAATCGGGATGCCCCAACCATACCAGAAGTTGATGCTAGTCGTATGGAAGACGGATTGCATGAATGGTAGGTAGATGATTCCTAGTTGTAAGAGAATCAGGATACCAATGATGTAGAACGCCATCTTATTTTGGAAGAAGTACTTGGAAATGACGGGGTGGTCATTCCGCAAGTTGAAGAGGTAGAAAATCTTACCAAAGATGATGATGTTCAGTGACATGGTACTACCGACGACATTTGGTAATCCAAGTGCGGTCAAGTAGTTGTAGGCGAAGATCCCCAATCCAGAAATTAGGAAGGAGACATAGCCGATTTCAAAATAATCTAATTTTGACAACAACCCAGACTTAACA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 21401-20506 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRBX010000027.1 Lactiplantibacillus plantarum strain FUA3302 NODE_27_length_32638_cov_22.068254, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 21400 36 100.0 31 .................................... ATATATTGCACGTCTGTTATATCTTTTGAAT 21333 36 100.0 30 .................................... AATAAGTAATTTGACAAAGCATACCTAAAG 21267 36 100.0 30 .................................... AAAAAGCCCAAGTAGGACCCTTTAAATAGA 21201 36 100.0 30 .................................... ATACAACTTGAAATAGTGAAAAGGACTAAA 21135 36 100.0 30 .................................... AGAAGAACAAGCGATGTTTGGACTATTTAC 21069 36 100.0 30 .................................... TACTTTGTCTTGTGATAGGAAATACTTTTC 21003 36 100.0 30 .................................... TCTTGTACGTTTTTTAGTTGTCGCAGCTAT 20937 36 100.0 30 .................................... TTTCTTGGTCAGACAGTTCACCGTTGTGCT 20871 36 100.0 30 .................................... CTTATTTTTTGTTGCCAGCTTGCTGACTTC 20805 36 100.0 30 .................................... ATTAGTCCTACCTGAAATGATAAGAATATT 20739 36 97.2 30 ......A............................. AACTTTGGGCGGATTATGGGTTGTTTCCCC 20673 36 100.0 30 .................................... TTGGGCAGCGCCCATGGTTTTATTCGTGTG 20607 36 100.0 30 .................................... AAACAAGCAGGAATTAGAAACAGTTAAAGC 20541 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 14 36 99.8 30 GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Left flank : CAGTGACGGTGTGAGTGAAAAGTATAGTTCAGTCATTTACAAGCAACTTGAAGCTGTATTGACTGACGATCAGCGAAAATTGATCACTGACATCAACAGCCAGCTGTACACCCTTGTGCAGCAATGCTTATTCATGATTGACCTACCTTTGGAAGTCACCTACGATTGGGATTTGAAGAAGCTGTTCAAGTACTGCCGAATTCATTTTAATGCTGATACCATGCAGAACCCATATGCTATAATTGAATCAATTATTAAAATTCATTTGGAATGTGGATTAAAGTCTGCCGTTGGATTAACTAATGTCGCTCATTATCTTAATCAGCAGCAATTAACTGACTTATCAAGGCTTACAAGTTCTACGGGGATCTCGACATTATTAGTAGAGTTCACAGATATGAAGTCACAGGAGCTTTATAACAATTGTGAGTTCTACTACATTGACGAGGACTTTGTTGATTGGCATTCATAACACATTAAAATATGGTTATAAAAAATCG # Right flank : GAAAAGTTTCTACCAGCCAGTTGACACGCTGTTTTAGAAGGATGTTAAATCGGGCCTGCGTCAAGTCGTATGATGAAGATTGAGCATCACCGAAAGGTGATGCTTTTATTGAGGCCTTGTTTCAACTGCTGAAAAGTGAATCCTTTGAACATATTACCGTCAAACAGTTGACGTTAGAATCGGGTTATTCAAAAAGGACTTATTATCGATACTTCAAAATCAAAACCAAAATTTTAGATATAGCATTTTGTAACTATCTAACTAGCTATCATGATTACTTACTAAAATCTTCCATTACACCGGATACTATCCCTAAACATTTTCTTGAATTTATTTGGCCCCACCATGACAAAATTGAATTGCTAGCTAAAAACGATCTCTTAGTTCCTTTGCTAACAAGACATATTCAAACCATTATCGCGCTTCTCCTGAGTGTAAATGTCCCTTGGCGCAAAAGCAGTTTGAATGACCAGCATTATGAGTATATGCTAACGTACTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //