Array 1 2326333-2325328 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2326332 29 100.0 32 ............................. CTGGAGGACGCATGACGGAGCAGGAGCGGGGA 2326271 29 100.0 32 ............................. CCATCCACGACTCCTCCAACCATCAGCCGCGC 2326210 29 100.0 32 ............................. TGCCCGGCCGAGCCGAGGCATTCGGTCAGGCC 2326149 29 100.0 32 ............................. CAACCGGAGGTAGGAGGCCGACAGCCGACGCG 2326088 29 100.0 32 ............................. TCCCAGTCGAACGCGGTGGTACTCGGCGCGAC 2326027 29 100.0 32 ............................. TCGGCCATTCCTCCGGGACGATCTCGTCGCCC 2325966 29 100.0 32 ............................. ACTTCTGAGGTCTCTGTCCCCTCTGTCGCGTC 2325905 29 100.0 32 ............................. GGACGTGAGTGGGATTCAGTTCAGGTCGGATC 2325844 29 100.0 32 ............................. CAGCCCGGTAGGAATTTCGTCGCAGCGACCCG 2325783 29 100.0 32 ............................. GCTTTAGGGGCCGACCGGTCCCATTCCATGAA 2325722 29 100.0 32 ............................. GTTGGTGATGCGCGCGTCCGGATGCAGGCGGC 2325661 29 100.0 32 ............................. GCGGCGCCGGACGCTCCTCGGGAGACCACTCG 2325600 29 100.0 32 ............................. GCGGGCGAGGAGCGCGGCATTGCGCGGCAGGA 2325539 29 100.0 32 ............................. TGCTCCAGTCGGTCACGTGCAGCCGCAGCAAG 2325478 29 100.0 32 ............................. TCCAGCGCGATGACGCATCCGCCGCGGAACCC 2325417 29 100.0 32 ............................. ACGTTCGGCCGAGAGCAAGAGGTCTACACCAG 2325356 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 17 29 100.0 32 GTCCTCCCCGCGCGAGCGGGGGTGCTCCG # Left flank : CCAGCTCATCGCCTCACTCGCCGACATCCGCGACCGCGGCTACGCCCTCGGCCACCAGGAATGCATGCCCGCCTGGAACAGCTGCGCCGCCCCCATCATGCGCACCGACGCCATCCTCGGCGCCGTCCTCCTGCTCAAACCCGCCACCGTCATGCCCCACGCCCCCGACACGGTCATCGACGCCACCACCACCGCGGCCACCACCCTGAGCCACCTCGCCACCCACACCTGGTAACCGGCCCCTGCCCATTCCTTCGGGCGGCCACGCAGGGCCGGACAACGGCACCGGCCAGGACCGGCTCGCGCCCAGCCCTTCGAGCACACGGACATGGCCACCGCCTCGCGCCGCCACCGAAAACCGGCACGCACCGAACACCTCGCACCGGCCTAGACTCACCGTCATGCCACCGCCCTTCGACCAGCACGCAGCAGACCGCCCAACACCGCCGCCAGCAGATAACGACTCGGCAAAGCCCCTATAAACGCGCAGGTCAAGAAGT # Right flank : CGGCGGCTGCCGAGACAGCTCGCAAAAGTGCCGCAGTCTCCTGGAGGCTGGGCAGCGTGGTTCCGGCGCCCGCCGCGCGGAGTTCCGCTTGCGTGCTGCGGCCGGAGGCGATGCCGATGGCGTGTAGCCCATGGGCCGCAGCGCCAGCCATGTCCGCGGGTGTGTCACCGATGAGAACAACGCTGTCGGCCCCGAGCGCCCTCCCCTCGTGCGCTGCTGCGCGGCGCAGGGCCGTGGCCACCAGTTCTGGACGGGTGTCGGCGTCTTCCCCGTAGGCGCCGAGTTCCCAGGTGATCGGGGTGTCAAGACCGAAGGTCGCGAGCTTGACGCGGGCGCTGCCCTTGATGTTACCGGTGACGACCGTCTGCCTGGTACCAGGTATGGCCGCCAGCGCGGCCAATGCGTTCGCCGCTCCAGGTAGGGCGTGGCCGCGTTCGCGGATCTCCGCGATGCGACTGAAGTGCAGGTTGGCGAGGGCGGTCGCGAAAATCTCGAAGTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCGAGCGGGGGTGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCGAGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2353922-2353100 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2353921 29 100.0 32 ............................. CGTCGCCCGAGTCCGCATCCGGCTCGCGGGCG 2353860 29 100.0 32 ............................. TGCCCAGCGGGGCGCCGGAGGAAAGCAGCAGG 2353799 29 100.0 32 ............................. CGCCGGACGCCCCAGGTGATCGTGCAGCGCAG 2353738 29 96.6 32 ............................C GGCAGCGCGGCCGGGCTGGGGTGGGCGTTCGG 2353677 29 100.0 32 ............................. CCCGGCCCGAGCATGAGTTCGCCTGTGTCCTC 2353616 29 96.6 32 ............................T CATTCGCATTCCTTTCGGTTGGGCCCCCGGGG 2353555 29 100.0 32 ............................. CAAGCGCGCGGCCCCGGGAGGTCACCCGGGGC 2353494 29 100.0 32 ............................. TTCGCCTACGAGCGAGAGCACGGCTCGACGCC 2353433 29 100.0 32 ............................. GTGCGCACGCGCATTTCCGCGAATGCCACCGT 2353372 29 100.0 32 ............................. TCGGACGGCCCGTCGCCTCAACGCGACAACAC 2353311 29 100.0 32 ............................. TGTCACCTGCGCCCGCCGGTCATCCTCCGCTG 2353250 29 100.0 32 ............................. TGCAGGTCGCGGTCGCGGAGTCGGCCAGTTCC 2353189 29 100.0 32 ............................. TTGCTGAACTCCAACCAGCGCCCCCACCACCG 2353128 29 82.8 0 A................T..C...GC... | ========== ====== ====== ====== ============================= ================================ ================== 14 29 98.3 32 GTCCTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : CCAGGGACGCGCACATCGACACCGTGAGTCGCTCATCAGTCACGGAGACATCAATAGCAACGGCCACTGACAATCGAGCCGCCCGCCGAGTCTTCCGGCCGGGTCCGGACACCTGGGGAGCAGCAACTACCAGCCATACCAGTCAAGATCGCCAAAAGCAGGCACACAGCCAGACGAAGCTCCTGAAGCACTGCCGACCTGGCAACAAGTCCCGACTCCCGCATCGGGACAAACCTCGGACGGCTTCCGCTACGACCACTTCCAAGACAATCCTGCGGTCAGGCGACATCTGCTCGCACCGTCCGAAAGACGTCTCTATCGCACAGGTGTTGGCCTATAGGCCCCACATGCGACGCGATCCGCCGCCGGCCGCGCTCCCCGAACCTGCGAGCAGGACCGCGACCTAGACTGCGGGCATGAGCCTCAGGCCCCTTCTCCAGCACAGGCGCACCGACGGCAAAGGAATGGCAAACCGCCTCTAACACCGCAGGTCAGGAAGG # Right flank : GCGGCGCGGGAACTGTGGTATGCCAGCCTGTTCGCCGGTGCGAGTGCTGGTGTTCCCGTCGCGGCCTGTTCTGGGTGCGCAGCTGTCGTCTTGTGGCTCCTGACATGCGCGTGGATCGATGAGAGCGCGTGGCGGTTGGGCGGGATATTGAGTTATTACGGTGCGCGATACGCGCCTTTCCCGTGACGTATTCTGCCGCATGTCCAATTAGGTGATCGCCGTTGCGTGTGCGGCTTCCCTGGGCGGCCTACGTGGCACGTTATCCACCGTCTGCGAGTGCGTGCGAATGCGCGCTATACGGCTGGCTACGGGGGAGGGGGCCGCGGGTGGGTGTCGGTGGACAAAAGTGCAGTGTGGATGGGGGTTCGGCGCCGTTCCGGCGTGGTGGGTCGGTGCGGGCCGGTGTGTTCGGCGGTGGCGGTGGCTGGGTGGTTGAGGTCAGGGATGCAGCTGCTGCCGCTGCCCTAGTTCGGGCCGTGGGAGCGGCTGGCCGCCACCGT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2364091-2367108 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2364091 29 100.0 32 ............................. TGAGGTTCAGGTGGCGTGTACACCTGCGTTTT 2364152 29 100.0 32 ............................. CCGGTGTGCGGGGTCATGGCAGTTCTCCCGGG 2364213 29 100.0 32 ............................. CACGACGGATTCCGTTTCCCGGATGCCGGTGA 2364274 29 100.0 32 ............................. GATGCCGGTCTTGCCGCCGCCGGAGGATGCCA 2364335 29 100.0 32 ............................. TTCCTGCGGCGGGGGTTGAAGACGACGAAGTC 2364396 29 100.0 32 ............................. GATGAACGCCCGCAGGGTGGTGCGCTCGACCT 2364457 29 100.0 32 ............................. ACGTGGGGCACGCCCGTCGAGGTCCGGGCGCT 2364518 29 100.0 32 ............................. TCGTAGCCGACGCCGCCCACCTGCCCCTCGAC 2364579 29 96.6 32 ............................T ACTCATGGGGGCCGGCCCCTGCGCGTTCACGA 2364640 29 100.0 32 ............................. GTAGGCGCCGGGGGGCATGCTGGCGGAGCTGC 2364701 29 100.0 32 ............................. TCACGGGAGTGGTGCGCGCGGGGAATTTCGCG 2364762 29 100.0 32 ............................. GCCGTGAACCTGATCCTCGCTGGGGTGGGCTT 2364823 29 100.0 32 ............................. ATCCAGGTAGCAGGTGCCGACTTGGGCGAAGA 2364884 29 100.0 32 ............................. CCTTACGCCCTCGAACTCGACCCGGAACGGGC 2364945 29 100.0 32 ............................. GTGAATGTCGAGGCGCGGCACATCCGTGTCGT 2365006 29 100.0 32 ............................. CGGGCCCGTGGGCGGCTGGTGGACGGCATAGG 2365067 29 100.0 32 ............................. GAGGAGCCACACGGCGGCGGTCATCGGCCCTC 2365128 29 96.6 32 ................T............ GCCGCGGGCCAGCCGAATCTCGCGCAGGCGTT 2365189 29 100.0 32 ............................. GTCGAGTCGGGGCTGCTGTCCGGCATCGACCT 2365250 29 100.0 32 ............................. TTGATGGCCGTGGTCCTGGTGGGCGTCGGCGT 2365311 29 100.0 32 ............................. ATGTGGGCGATGACGGAGCCGGTGCTGCCGGG 2365372 29 100.0 32 ............................. GCGTTCGACGGCTTGCGTAAGCGGCTTACCGG 2365433 29 100.0 32 ............................. AAGCCGTCTACCGCCGCCTCCAGACCCTCGCC 2365494 29 100.0 32 ............................. TGAGGTTCAGGTGGCGTGTACACCTGCGTTTT 2365555 29 100.0 32 ............................. CCGGTGTGCGGGGTCATGGCAGTTCTCCCGGG 2365616 29 100.0 32 ............................. CACGACGGATTCCGTTTCCCGGATGCCGGTGA 2365677 29 100.0 32 ............................. GATGCCGGTCTTGCCGCCGCCGGAGGATGCCA 2365738 29 100.0 32 ............................. TTCCTGCGGCGGGGGTTGAAGACGACGAAGTC 2365799 29 100.0 32 ............................. GATGAACGCCCGCAGGGTGGTGCGCTCGACCT 2365860 29 100.0 32 ............................. ACGTGGGGCACGCCCGTCGAGGTCCGGGCGCT 2365921 29 100.0 32 ............................. TCGTAGCCGACGCCGCCCACCTGCCCCTCGAC 2365982 29 96.6 32 ............................T ACTCATGGGGGCCGGCCCCTGCGCGTTCACGA 2366043 29 100.0 32 ............................. GTAGGCGCCGGGGGGCATGCTGGCGGAGCTGC 2366104 29 100.0 32 ............................. TCACGGGAGTGGTGCGCGCGGGGAATTTCGCG 2366165 29 100.0 32 ............................. GCCGTGAACCTGATCCTCGCTGGGGTGGGCTT 2366226 29 100.0 32 ............................. ATCCAGGTAGCAGGTGCCGACTTGGGCGAAGA 2366287 29 100.0 32 ............................. CCTTACGCCCTCGAACTCGACCCGGAACGGGC 2366348 29 100.0 32 ............................. GTGAATGTCGAGGCGCGGCACATCCGTGTCGT 2366409 29 100.0 32 ............................. CGGGCCCGTGGGCGGCTGGTGGACGGCATAGG 2366470 29 100.0 32 ............................. GAGGAGCCACACGGCGGCGGTCATCGGCCCTC 2366531 29 96.6 32 ................T............ GCCGCGGGCCAGCCGAATCTCGCGCAGGCGTT 2366592 29 100.0 32 ............................. GTCGAGTCGGGGCTGCTGTCCGGCATCGACCT 2366653 29 100.0 32 ............................. TTGATGGCCGTGGTCCTGGTGGGCGTCGGCGT 2366714 29 100.0 32 ............................. ATGTGGGCGATGACGGAGCCGGTGCTGCCGGG 2366775 29 100.0 32 ............................. GCGTTCGACGGCTTGCGTAAGCGGCTTACCGG 2366836 29 100.0 32 ............................. AAGCCGTCTACCGCCGCCTCCAGACCCTCGCC 2366897 29 100.0 32 ............................. TACGTCGAGTCCCTGCGCGCGATCCGGGTCCG 2366958 29 96.6 32 ........................C.... CTCATCGCGCGCCCGATCTCCTTCGGCTGGAG 2367019 29 96.6 32 ..........................C.. TTCTACAACGGCCGCCAGCAGGCGGCCGGGTC 2367080 29 96.6 0 ..............T.............. | ========== ====== ====== ====== ============================= ================================ ================== 50 29 99.5 32 GTGCTCTCCGCGCGAGCGGAGGTGAGTCG # Left flank : GCAACTGCTCGACCCGGCTGGGGAGTACGAGACCGAGGACCCCGACGAACAACTCGTCGACCTCTGGGACCCCATCGCCGGGGCCATCCCCGGTGGCATCAACCACGGGACGGAGACATGAGCCGCGAAAACTACGGCGGGATGTGCCAGGAGGAAGGACAGCCGGGCCCATGGCGTCCATGGTGATGATCTCCGCAACGGCGGTCCCCGAACATCTCCGTGGGGCCCTCAGCCGCTGGCTACTGGAAGTCACCCCGCAGCTCTACGTAGGCACCGTGTCGGCCCGCGTCCGCGACGAGCTGTGGACTTCGGTCTCCGCCTGCATCGGCGACGGCATGGCCGTTCTCGCTTACCCCGACGCCAATGAACAGGGCTTCTCACTCCGCACAGCCGGGACCCGCCGCAGACACCCCCTCGACTTCGACGGCCTCACCCTGATCGGCTTCCGGAAGGAAAGTCAAGAAACGGCAAAGCCGCTCTAACGTCGCAGGTCAGAAAGT # Right flank : GCCAGGTGGAAGAGATCCCTACAGCGCATGCCGTGATCGCTGTGGGCTGCGCGCGCCCCCCCGGTTGTGACGAGCGAAGACTCGGCCGAGCTTGATGCCCGCCGCGCTTCCACGACAGACGCCCGCGGGGACCGCCGGGACCGCCGGGACTTGTCGGCGCCGAGTGCCAGTGCGGGGGCATCCCTATAGTACGGTTCTCGGGCATTCCGCAGACGTCGCCGGTGCGCCTCGGGAGATGCTCCCACGGCGTCGAAAGTCGTCCCGGCCGGGCATGTCCGGACGGGTGGTGATGCGGGGTGGCAGTCGGGCTGCCACCCCGTACCGCCGTGCGGGGTGTCTCAGGGCCTGGTGCCTTCCCAGTAGTCCGCCTTGTCCGCGTCCCGGTGCTGTTCGCGCCCGAGGGTGGTCTCGGTGGCCGGCTCGACGGTGACGACCGGGGAGAACTCGGCCGGCGTCAGCGGCGCGGCCGTGTCAAGGGTGGTGTCCATGCGTGTGCCTCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 2374461-2374249 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2374460 29 100.0 32 ............................. CCGTTCATCACGGCCCGCGCCGCGTAGTCCTC 2374399 29 100.0 32 ............................. CTGTTCACGATGGTCGACCTGCTGTCCCGGGG 2374338 29 100.0 32 ............................. AACGCCGCCCGCCGGCGGCGGGAGCGCACCGG 2374277 29 79.3 0 ...T............T.......GGTT. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.8 32 GTGCTCCCCGCGCGAGCGGGGGTGATCCG # Left flank : TGGAGAGCAACCAATTGAAAGCGAGAATATCCAGCCATCGTGTCGCGCGGATGCTGACCGTTATCTGGCCTCCGGGTCAAGTCGAGCGAGCTGGCAGGTTTCTCGTGGCGCTGGCGGCTGAGCCGGACACAGAAGTCGAGGTCACCTTTCCGGAAGCCAGTGATTTGCTGGATGTCTACCGGCAGAGGTATGCCTTCCATGGCGAATCCGCGAAACACTATGGATGGTGTGAGTTTCTGTCTGCTCTCGAGGTCGAGGATGGCGCTGTTGGGTTGCTCTCTGTGCGAGCTGCTGGGATGAGCGCGATTGTGCTCGTCGATAAGCAATTGGAGTGCGTTCTGGCAGCACTCCTCCGGTAGGAATTGCCTCTGCCGGGAAGCGCTGATCCTCGATCCACCGGCCGGCTTCTGGTGTGGCTTCTTGGGTTCAAAGGCGAGTTCTTCGGTCGTTGGCTGGGTGGGTGATCCGGTGTCAACCGCGTTACCAAAGTTCGCCAGAAA # Right flank : ACCATGCTTGCCCAGCAGGTTGTCTTCGCCGCGTTCTCTCGCGGGCGCGGTGGGCGAGCTGGCCAGCTGTGGGGGCGAGGAGGAGGGCCGCGTGTTTGAGGGGGTGGGTGTATCGAGCGATGGTGCGAAGTGGGGTCGCTGTGGGTGCCGTCCGGCGGTTACGGTCCGGTGAGTGCCGGGGTGGTGGGCCGTTGGCCTTCTTGGAGGGCGAGGAGCTCGGCGAAGACCGAGCCGGTTCGGTCGGCCAGTTCTGTGTAGGTGCCCTGTTCCAGGATGCGTCCGTGGTGGAGGACGATGATGCGGTCGGCGTGGCGGGTGCTGGTCAGGCGGTGTGTCACCAGCACAGTGGTCCGTCCGGCCGCGATCTGCCGCATGGACGCGAACAGGGCTGCCTCGGCGCGGGCGTCGAGGGCGGCGGTGGGCTCGTCCATGATGAGTAGGGCGGCGTTCCGGTGGAAGGCGCGTGCGAGGGCGATGCGTTGCCATTGTCCGCCCGAGAG # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGGTGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 2392579-2391513 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2392578 29 100.0 32 ............................. CGTCAGCCACATGCCGTCGCGGCGGAACACCT 2392517 29 100.0 32 ............................. GAGACAGAGGGGAGCGCCCCGGCCGTGAGCAG 2392456 29 100.0 32 ............................. TCCTTGACCGTCTCGCCGGCGTTCCACCGGTC 2392395 29 100.0 32 ............................. TTCCGGGTAAGGCTCTAAGGTGGTTCGGCAAT 2392334 29 100.0 32 ............................. GCCCGTCGCCGCGAGCCCCGGGCGGGCATCCA 2392273 29 100.0 32 ............................. TGCGCGACCGCGGTCAGGCCGCCGACGACCTG 2392212 29 100.0 32 ............................. ACCGACTAACCCCGAGGAACACCTGGCGTACA 2392151 29 100.0 32 ............................. CCGGTCGAACTCGCCTCGTTCCTGCGGCTGCG 2392090 29 100.0 32 ............................. GGGCCCGGTACCCGCGGCCGGGGATCGAGCTG 2392029 29 100.0 32 ............................. ATCCCCGCCGCCCTGTTCGCCATCGGAGACGT 2391968 29 100.0 32 ............................. TCATCGCGCGGGGCGACCGCAGCCGCAGCGTG 2391907 29 100.0 32 ............................. GTCGCGGCCCAGTTGTCGAAGGCGTCGAGCCC 2391846 29 100.0 32 ............................. GCGCCCCGGGGCCGCCCCCGTTCTCGGGGGTT 2391785 29 100.0 32 ............................. GACGGAATCGTCGGCGTATGGAACAAGGTGGC 2391724 29 100.0 32 ............................. CACATGTTGCGCAGTCTGATCAGGCGTGTGGT 2391663 29 100.0 32 ............................. GACGGCATCGTCGTCGCCAAGCAGGGCACGGG 2391602 29 93.1 32 .............T...........C... TGGGAGGGCGACACGCCCTGAGCGGCGTCGTC 2391541 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.6 32 CTGCTCCCCGCACCCGCGGGGCTGTTCCC # Left flank : GGACGACGAGATCATCTGGTGACCGTCATCGTCCTCACCAACTGCCCTGCCGGCCTCCGCGGGTTCCTCACCCGCTGGCTCCTCGAAATCTCCCCCGGAGTCTTCCTGGGCGCCCCCTCCACCCGCGTCCGTGACCTGCTGTGGGCCGAGGTCCGCAAGTACGCCGGCCAGGGCAGGGCCCTCCTCGCCTACCAGACCAACAACGAGCAGGGCTACACGTTCCAGACACACGACCACTCATGGCATCCCACGGATCACGAAGGCGTGACTTTGATCCACCGCCCCACGCGCAAACCCACACCTCGAACGGAACCCCAGACAGGCGGCGGCTCCCGGACAGCAGGCTGGAGCAAGGCCGCGAAGCGCAGGAAGTTCGGCGGCAGATGACTGAGCCGTTGAAGCGGATGACATCCGACATGGCTGCTATGGGCGAAATGGGAACTTCTTTGGAAGTGAGTAAAAACGGCCTCCCCGCCAGATAAAAGCGCAGGTCAGCTTCT # Right flank : GCGCTCAGCGGGCCGCACAGCCCCGCGACGGCCTGCTCCCCGTGCCGGTGGCTGCCCTCTCGGGGAGCAGGTTGGCCGGGGCGTTGCGGGCGTCGGTGATGCGGGCCGTTCACCGGCCGTGCAGCACGGGGGCGAGGTCGCCCCAGTTCGAGTCTGTTTCGGGTGGGTACTTGGCCGGGGCGCGGGGGCGGTATGGTGCTTGGCTGTGAACGGTCGCTCGTTGTGGGCGGGTTGGTCGGAGTCAGCTGGGCGGGTCAGTAGGTCCACGGTGGTGGTGACGTGGGTGGTCGGGCGTTGTGGCAAGTCCGGTGTGGGTGGTCGGGGTGTGGGTGTTGGTGGTCGAAGTCTGGGGTTGCGTGTTGGGTGTAGTGGGTGGCAGTAGGGTGCGTCGGGTGGATCAGGTTTCGCGTCTTCCGGCCTTGTTTCGTCTTGTTGTTACGGGTGGTGGGACTGGGGGTCACACGTATCCCGCGTTGACCGCGGTCCGTGCGTTGCAGGCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 2405880-2403274 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2405879 29 100.0 32 ............................. CGGTACCTGCGGCTGCACCTGAACGTGCGTAC 2405818 29 100.0 32 ............................. GCGTCGACGGCATCGAGCAACGGCTGACCCGG 2405757 29 100.0 32 ............................. CCGGGCTACGGCATAACGGTGCTCGCGGACTA 2405696 29 100.0 32 ............................. GCCCGAGAACTGACAGTTCGTCAGTTTTGTAC 2405635 29 100.0 32 ............................. GGTGTGCGTGGATCGGTCACTCGATCACTCTG 2405574 29 100.0 32 ............................. TGGACCCCTGAGGTGTTCGCCAAGCTCGGGAT 2405513 29 100.0 32 ............................. TGCTCGGTCCCCGGCTCCAGACCGAGGCGGGC 2405452 29 100.0 32 ............................. GCGCGGGCCTTGGACCGCAGGAACTCGGCCTC 2405391 29 100.0 32 ............................. CGCTGCCCCGAGGCGTAGGGCAGCGGTGTGGT 2405330 29 100.0 32 ............................. TGGCCGAGCGCGTCGTAGATCGGGGGGAGCGG 2405269 29 100.0 32 ............................. AACTCGGCACCCCGAAGGTTCTGATGGACGAG 2405208 29 100.0 32 ............................. ATCGAGCCGGGGCGCCGGTCGAGATGCACGAA 2405147 29 100.0 32 ............................. GCCCCGGCGCTCCTGGCGCTGCTCGTGCTCAC 2405086 29 100.0 32 ............................. CCGAAGACGGCCAGCTGGCCGTACCGGCCGAT 2405025 29 100.0 32 ............................. GCCTGCATCTCCGACTGGCCGAACTCGTCGTC 2404964 29 100.0 32 ............................. CGTGGGGGCCGGTACAGCCCCGACAATCCGTT 2404903 29 100.0 32 ............................. GCCCTGCTCGGCGCGCTGCGAGCCCGCGGCGT 2404842 29 100.0 32 ............................. TGCGCGATCGGCTCGGTGTACGCGTCCAACGT 2404781 29 100.0 32 ............................. ACGCCCCCGGGGCACACCAGCCCCGGGGGCCA 2404720 29 100.0 32 ............................. TGGAGATGGGGATGAGGGTGCTCGACGGATCT 2404659 29 100.0 32 ............................. ACATCCATTCCCGGAAACCCCGGGAATGGGGT 2404598 29 100.0 32 ............................. CCCACGTTCTGGGAGCCATACGGCGACTACCC 2404537 29 100.0 32 ............................. CCCACGTTCTGGGAGCCATACGGCGACTACCC 2404476 29 100.0 32 ............................. GCTCGCCAACAGTCGCCAACGAATGCACAGAG 2404415 29 100.0 33 ............................. ATCACCCCGGCGGCGGGCGTTCCGACGGGCGCC 2404353 29 100.0 32 ............................. TCGACCAGGTCGCCATCCCGCTCGATCCGGAA 2404289 26 89.7 12 ..........................--- GTTCCCGCGGGG Deletion [2404264] 2404257 29 72.4 6 ...T.....A..G.T...C...C..C.T. GTAGAT CTCTA [2404233] Deletion [2404223] 2404217 29 100.0 32 ............................. TGTGAGGGCACCGGCCCGGACGGCCAGACTTG 2404156 29 100.0 32 ............................. TCGGCGCCGTCGTAGGTGTCGCCGTCGGGGGT 2404095 29 100.0 32 ............................. GCCAGTGGCGCGCCGAACTCGCCGCGTCCCGA 2404034 29 100.0 32 ............................. GCAGACGCTACACCCATCAATGGGTGTACGCC 2403973 29 100.0 32 ............................. TCTGGCGCCCGGCGAGGTTCGTCGTGAACGTC 2403912 29 100.0 32 ............................. TGCAACCACCGTGCCTGACGGCGGAGTTGGAA 2403851 29 93.1 32 .........C....T.............. CCGAAGGTCGTTCAGCAGCGCTTGGGGCACAA 2403790 29 100.0 32 ............................. CACGCGGCGATCCGCCTCTACACGTCAGCGGG 2403729 29 100.0 32 ............................. TTGCCGGCGGTCTGCCTAGGCATCGGGGTCTT 2403668 29 96.6 32 A............................ CACGCGGCGATCCGCCTCTACACGTCAGCGGG 2403607 29 100.0 32 ............................. TTGCCGGCGGTCTGCCTAGGCATCGGGGTCTT 2403546 29 93.1 32 A.......................C.... CCCACGCCGTCGAGATGTTCAAGCAGCGCGCC 2403485 29 100.0 32 ............................. GCCAGTGGCGCGCCGAACTCGCCGCGTCCCGA 2403424 29 100.0 32 ............................. ACCGCGACGAACGGGAGCGTGCCCACTTCCGG 2403363 29 86.2 32 ........T........A........GT. GACTTATCTGAGTACACCCGCAAGGGTGAAGT 2403302 29 79.3 0 TCAT......T..T............... | ========== ====== ====== ====== ============================= ================================= ================== 44 29 98.0 31 CTGCTCCCCGCACCCGCGGGGCTGTTCCC # Left flank : ACACGCGCTGGTCAGGACGCGGAACCCGGTGGGGCGAGGTGGGACATCGGGAGCATTGCGCCCGGAGTGTGTTCGAGGGAACGAGGACGGCCCCCGGCCGCGTTTCCGCAGGCCAGAGGCCGTTGTGTTGGAGTGGCGGCGCCAGGATTCGAACCTGGGAAGGCTGAGCCGGCAGATTTACAGTCTGCCCGACTCAGGCCCCTGACCAGGCACAACCCCCCTCCTGGCGCCCGCCGCCCCACAAATACCCCACAGCCGACCCCGCCGAGACTCCCAGCGGCCCCGCCCCGCGCCCCCGCTGGGGAGACAAGCGACGTGCCTCACCCTTCCCGCACCCCGGACGCCCCCGTGCACGATCTGGCAACATCGGGAGGGCGCACGGAGAACAGCACGTCCATCCGCGAGAGATGAGCCATATGGCCAGTCCGCCCGATAAGCCCGAACCTCAAGAAGTAAGTAAAAACTCGGCTCCCAGCCGATAACGTCGCAGGTCAGCTTCT # Right flank : GTCGCCGTGGTCACGACCGAGGTAGGGCCCGACACGCACCCACCGCACAGTGCCGATCACTCATTGGCGCAGCGCCCTTGATGCCCCAGCTCAAGAATGCCCTCCCATCGGAAGTGGGAAAGGTTCGTCACCTGCGGACGCCCCGCCCAGAAAGATGGAGGATGTGGAGGACAGTCCACCGCGTGCAGTCGCAGACACCACACTCGTCGAGCCAGGACCCCCGCATAACATCCCTGTGGCAGACGCCCTGAGTCGTCATAGTCTGGTCCTGCACCTTCAATCCTCGCGTACCGCGAGGCTGACCCCTAAGTCAGCTCGGCCGTCTCAGTGCTCCCCACACACGCGGGGATGACCCAGCCCGCCATTTCCCTGTTGAGTGGGCCCGGAAGCGGTTGCCGTGAGGACGGCCTCGGCGCTGGGGCGCCGATCCATTCGACCCGCGCCGCCCTCTCCCGCGAGAGGTTTCGGCGCTTCTGGAAACTAAGTTACCTCCGCTGTCG # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 3810759-3811977 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ============================================ ================== 3810759 27 88.9 44 CC...........C............. GCCCGGCCGGGCGTCCGCTACCTGATGCGGCGCACCGGGCTGTC 3810830 27 96.3 40 ................A.......... ACTACGTCAGTCCCGGCCTGTCCGCTGAGGTGCCGGACGC 3810897 27 100.0 41 ........................... GCGCCCGTGACCGGTCTGCTGATCAGCTCCACCGGAGCGGC 3810965 27 92.6 39 .G...........C............. AGGCGCGTTCGACCGTCGCCACGGTGCGGGAGGTGGAGA 3811031 27 96.3 39 .............C............. GCAGGTGGGGGAGTTCACGGCTCGGTGGGGGCGGCAACT 3811097 27 96.3 40 .............C............. ACTCGGGGCAGCGGTGCGCTCTACGCGTCACGCTGGACGT 3811164 27 96.3 38 ...................G....... GCCGGTGATCACCATCGCGCCCAGAACCAGCGCGGCCC 3811229 27 96.3 39 ...................G....... GCAGGGGGACGAATAGATGGGTGCCATCGGTGACAGCAT 3811295 26 81.5 34 ...............-......G.GCC ACGGACGCGCGGCGACGGTCCGCGTCGAGTACAG 3811355 27 96.3 41 ...................G....... GCCTGATCAGGCGTGGGTGCGCGAGGGGGCGCCTGGCGCTA 3811423 27 92.6 39 ................A..G....... GCCGGGTGACCGCGCTGCTGAGCAGGATCAGCTCAGCCG 3811489 27 100.0 42 ........................... ACGAGGCCCCCGGATGTGTGCCTGTGGAGCGCTGCCCGACGT 3811558 26 96.3 41 .....................-..... ACCGCGGAGACGGAGACCGGGTACCGGCTGCGTGTCCTGAG 3811625 27 100.0 36 ........................... ACTGCGCCGCCTGGTCGCCGAGCCGGATGTGCAGAT 3811688 27 100.0 39 ........................... ACACCCGCTTGTCGGCGCGGTCGCCCTCGGTCCGGCCGC 3811754 27 100.0 40 ........................... ACACCGGGCAGGTGTGGACGCTGCCGCAGGTGGCGACGCC 3811821 27 100.0 39 ........................... ACCACGGACCGCGAGGTACAGGCTGCACGGTCCGCCCTG 3811887 27 100.0 38 ........................... ACCAGATCGACAGCCATGTCAGGCCCCCAGCATCTGCG 3811952 26 85.2 0 ...................-CCC.... | ========== ====== ====== ====== =========================== ============================================ ================== 19 27 95.5 39 GTTGCGAACCCACTTGGGGTGATGAGG # Left flank : CCGGCCTGGCCTCGTTGCACGACGCCGGCCTGCTCGGCCTGATGTGGGCGACCATGGCCGGCTGGCTGCACGGCGCCGCGCTGGTCGGCTCGGAGAAGATCCCCGCGGAATCGTTCACGCCCATAGCGATCCGCTGGATGGCGACCGTCACCGAGATCATGACGGGGTACGCGTCCCAGGTCGACGCCGGCCGCTACCCCGGCGACGACGCCACCGTCGACGTGCAGATCGCGGCGATCGACCACCTCCTGCACGCCGCGGCGGCCCGGGGCGTGGACAACTCCCTGCCCGAGCTGCTGAAGGCGACCATGCGCCGGGCCGCGGCGGCCGGCCACGGCCCCGACAGCCTCGCGAGCCTGGTCGAGGTCATGCGCAAGCCCCAACCCCCGGCCTGACCGGGAGCCGCCGGGCTGACCGGGAGCCGCCGGGCCCCGGGGCCCACCTGCCCCCGGCGCCCGCGCCGAGCGCGAGTGCGCCCGTGCCGGGGCGGCGGGGCGTGG # Right flank : GGTAAAGGGCCAGGTCGGAGGGGCTGTTGGGTGGTGGCTGGGGCCGGGTTTTGCAGTGACTCGTCGGTAGTGCATCAGTGCAGGTCACAGGCTCCGGTGAAGCGGAGGGGGTTGGCCGTTGCCGTGATTGCTCGTGCTTCGGGCCAGCTTAGGCGCATCCGGCGCTGCGAGTGGCCGAGTCCGAACAGCTCCTGTCGGGCCGCGCCCTGATCGGTCCCGAGATGCCTGAGCGCCATGGCGGGCGGGTTCTCGCCGTGCCCCGGTCAGCCCACCGGGCGCCGACGGTCGACCGGCGCGTTCGATAGTGGAGAAGGCTTTGGCCGCCGGCCAGGTATTCGACCGTCGTCGCGCGCCTTGGCAACGAGGGCGCGACGAGGGGCGCGCGTTCCCGCGAACGACGCGGCCGACGCGGGCGGCGCGAGTGGGCTAAACGGGCGCGGGGCCGGTGGATTCGCGGGGGATGAGGCGGGGCGGGCGGACCGGGACGGGGCCGGTCGCGT # Questionable array : NO Score: 2.59 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGAACCCACTTGGGGTGATGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [11.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 8 4391323-4392433 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================== ================== 4391323 29 96.6 40 ...................C......... TTTGGGTCGACGGGCGCCCCGCCCGCCGGGTCCTGATCCG 4391392 29 89.7 66 ..............GA..........A.. CCCTGGGCCATGCGTCCGTTTGAGGGCCGAAGGCCAGGGCCAGGAGCAGCCCGGCGACGGGCAGGG 4391487 29 100.0 36 ............................. CGGCCGGCCCCGGCACCTCGCCAGCGCTGCGCTCGG 4391552 29 100.0 36 ............................. CATGTCCGGCATGGCGGACGCCACGCAGGCGGCGTT 4391617 29 100.0 37 ............................. GCGCCACCGCCACCGCGCCACCGCCGGCTGCGGGCAT 4391683 29 100.0 39 ............................. CCGAACCACCTGCCTGGCCTACGGCGCCGTATGGACCCA 4391751 29 100.0 37 ............................. TCGACCGCGCGGTGCGGATGCGCCTGATCCCGCCGGC 4391817 29 82.8 31 .....A...............GG..CC.. ATCCCTTCGGTCGGTCCGGCGGCGTACTGGC 4391877 28 96.6 35 ........-.................... CCGCGCCTCCGCGTACAGCACGCCCGGGTGTCGGG 4391940 29 100.0 37 ............................. CCGAGCACGGACATCGGGCCGCCCCCGAAGGACGGCG 4392006 29 100.0 38 ............................. CCCCCTGCGGGGTTGCTCCCCGGGCAGATCGTGAGCGC 4392073 29 100.0 38 ............................. GAGCGGACCCTGGCGTCCGGCCTCTCCCGGGGCGACGC 4392140 29 100.0 38 ............................. CACCACATGACCCGCTGCCACGAATACACCGAGATGGC 4392207 29 100.0 38 ............................. CGAGACGGCTCCGCCGGAAACCGCCACCCCTACGGAAC 4392274 29 100.0 35 ............................. CCTGGCTTGGCGTAGGCCCCGCACAGGCACTCGCC 4392338 29 100.0 38 ............................. CCGCTCCTGGGGTGTGCCGGCGTGCTGGTAGAGCTGGG 4392405 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================================================== ================== 17 29 98.0 39 GTTGCGAACCCACCTGGGGTGATGAGGAC # Left flank : GGTGCGTGCGCGTCATCCATGCCATCCGGCCGGCCGCGACAGCGTTCGCCCGCTCCTGCCCGCTGCCGGCGTCCGCCAGGGCGGCACGCAGCCGCTCGACTTCCTCCGGCCACGGAGCCAGGGCCTCGACCAACTCCTTTTCGGTCTGCGGCCCCTCATCCGGCTCAATCACGTACGGACTCCGCGGAACCGGCCACCGACCAGCACTCACCGCAACCTCCTGATCACACGGTGACTCGACACGTGCGGTACGTTACGACATTGCGGGAGGCCCGGGGACAGGTAGGGGGTCGGGGCCGCACGGTAAGGGAGAGCGGGCGGCTGCCGGGCGCCGCAGCTCGCGTTGACTTGAGACAGACGCAGATCCCGCGCAGACCCTACCGGTACGGCACGAGGGGCGGTCGGCCGCCCGGAAGAATCAATGCAAACGGTTGTTGGTCCGGTGCGCCTCCGGATAAGGACGCGGAAGCCGGCGGCCCGCAGGCAGCCTGGTCCGGCGC # Right flank : CCCGAGGGTAAAGCCCCAGGCCGGAGCGGCAGTCGAACGTCGGGCGTAGCTGGATTGTGCAGCGACTCGTCGGTAGTGCATCGGTGCAGGTCAGCGGCTCGGACGGTGCGGGGGTGGGGCGGGCGGCGCCGTGATTGTCAGTGCCTCCGACTAGCTTAGCCGTCCTGGTCCTGAGGGCGCGGGAGCAGTCTGAGCCGCCTCGACGGATTCGCGTCTTATATCACGTTTCAAGCGTCTGTTCAGCTTTTGTCAAGAAAACGCACATTGCGCTCCGGGCTTCGGTAGTGTCCGCAGGGACCACTCACCGCGAGCGGTGGTCGACAACGCGTGTTGGTGACACAAACGTTGGGGGTGCGGTGCGAGTCAGAGTTGACGTCGATGCGGACGTGCCGAGTCTGCCGTGGGACGACGTCCACGGGCCGGCGCGGGCGGTGGCCTACGGGGTGATCGGGAGCCAGGACGCGGCTCTGGCACGTGCGTTGCACGACAACGGCTGGAAG # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGAACCCACCTGGGGTGATGAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 9 4401571-4402656 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 4401571 29 93.1 38 ..CA......................... CGGCACCGGCTACCTGATCCTGGCCACGGTCACCAGCC 4401638 29 100.0 39 ............................. CCCGCGACGGCCGCGCCGAGACGCCGGACGACCGCGCCG 4401706 29 100.0 36 ............................. GAGCAGCCGCAGCCGGGCGAGGGGTTCGGCCATGGC 4401771 29 100.0 37 ............................. ATCCTGAACCCCCGCCGTGGCTGCCGCCGGGGCCGAT 4401837 29 93.1 35 ......G.........A............ GCGGCCCGCGGCTGGACCGCACCCCCCGGTGCCAC 4401901 29 100.0 37 ............................. CGGTAGAGCGCGGCCCACCGGCCGGAGCGCGGCCAGA 4401967 29 100.0 36 ............................. CGGCGCGGAACGGGTTGCCCCAGCGGCTCGGTCGGC 4402032 29 96.6 35 ...........................G. CTGCATGCGGGCGATCAGCCGGTCCCACCACGCCC 4402096 29 100.0 36 ............................. CCGTATCGCGGATGTCGCGCGGGACACCATCTACGC 4402161 29 96.6 37 ..........................C.. TTGCCGATGGTGATGCGGCGGGCGAGGGAGGCGGCGT 4402227 29 100.0 40 ............................. CAGGTCTTCCGGCAGTCGCGGCGCGGGCCAGCCCCGGGAG 4402296 29 100.0 38 ............................. ATCAAGATCATCCGCGCGAGCACCCTGGCCCGGCTGCG 4402363 29 96.6 39 .............A............... CGCCGGTCTGGATGGCGGTGTAGGTGGCGACGTGCACCG 4402431 29 96.6 37 ........G.................... ACGCGGGGCGCCTCAGCTCCACACAGGACGCGCAGAG 4402497 29 100.0 36 ............................. ACGGGCCGCGCTGGCGGACGCGACGTGCGCGCAGGT 4402562 29 96.6 37 .............T............... ACCCTCTGCGGGTGCTCGTGCTCGACTGCGAGAACGG 4402628 29 96.6 0 .............T............... | ========== ====== ====== ====== ============================= ======================================== ================== 17 29 98.0 37 GTTGCGAACCCACCTGGGGTGATGAGGAC # Left flank : GTCGTGGAATACTCGATCGATCCGATTGTCTGCCTGCTGTTGGGTGCCCTGCTGATCCTGAGGCCGTCACTCCCGGCGAAGAGGGTCGAACAGCCCTGCGGTAGGGGGAGTTCCTCAGACGTCGAGGGCCCTCTCGCGCCAGGCAGTGAAAATGAGGCTGCTGTGGATGCTGGCGCGTCGGGAAATCCCTCAAGGGGTGATGAGGTGAGCACTTCTTCCCGGCCCGTACAGATTTCCATCTCACATGAGATTATTAGGGTGGAGAATCACGGGAAGCGCTAGTGCCAGGTTAAGGGATATCCCGTATCGGCTGGACAGATGCGGGCTACTTCGTAACGGTGGTGAGGCCACGACGTCGAGTCCACCCTCGATGACGTCGTTCACCGAGATGATCTCACCCATCCCTGCTCGACAGGTCGATGACTACATTGCGCTGACGCGTGGCGCGCGGATCTCGGCAGGCCCAGCGGCAGCGATGACGATGCGCCGCAGATGCCGCC # Right flank : CCCGAGGGTAAAGCCCGAGGTCAGAACTGCTAGGCAATGTAGCTGGACGAGGGCACTTGCAGTGACTCGCCGGTCGTGCATGAGCGCTGGTCAGAGTGTTAGCCGACCACGATGTGCTCTCCCGATTCTCGCGCGGGTTGGCTTAGATGGCTAGTTCCCACGTCACGGCTCTGCGAAGGCGGGATCGGCGGCCGATGCGTGTCTGACGTTCCATGAGTGGGGTGCCTCTTGGACGCCGCCTTGCCGACCGATCCCGCGTGTCGAGTGTGCGGCGTCCGTGAGCGACGATTGCCATGGGCAGGGCGTGACCAGCGGGTCAGCAGGGTCAGGCTGGCTGGTCGCGGCCCGGGCGTCGGCTTTGCCGCCGTGGGGGAGAACCGCTGTGTGACCGGCTTGCGAACGTGTCGACGGCGTTGCTGGAGCCGATGCCCACCGTGACACGCTCGCCGCACTGCCGAAGGGCCGATCGGTGCCGCCCTGGAGACTGCCCCGACACGTCC # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGAACCCACCTGGGGTGATGAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 10 4548738-4549010 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4548738 29 100.0 32 ............................. CGTAGGCGGATTCTTGATGTACGTGGGAATCC 4548799 29 100.0 32 ............................. GAGCTGCGCGCCATCGGGGAGCCCGCTCTGAC 4548860 29 100.0 32 ............................. GCCCGGCCGCCGGACCAGAACTCCACGCCGAC 4548921 29 96.6 32 .............A............... ATCAGGGAGGAATACGTACAAACCCCCGAATG 4548982 29 72.4 0 ......T..T...A......A.C..TT.T | ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.8 32 CTGCTCCCCGCCCGCGCGGGGATGACCCC # Left flank : CGCGCAGCGCGGCGAGGAGACGGCCGGCCAGGCGGGAATCGAACGAGGTGCCGCGCTGGTCCACATCGGCGCCGGGCGCCAACCCGCCCAGATACGCGGCGCGTTCGGCCTCGTCCACGTGCACCAGGCACGCGGCGCGCCCGGCGATACGGACGCCTCGGCAGCCGACCCGGTCATCGGCGGTCGTGCCGTGGCCGCAGTGCGGCCACGGTAACCGCGGGCCGCCGGAAGCGGCGGAAGGCTCGTCGGTCATGCCCGGTGGACGACCGACACCGCCCACCGGTTGCCCCCGCCCCCGCCCCACCGACCAGGACCGGCCACCCTGCCGCACTCCCGTGACCTCGGCCCGAGGGCGCTCCGTCGAAATGCTGGATGCGTGCCGATCGACGAGGGAGGAGGCGCGGAGAGAGTCAGTGAGGGTACTTTGCTACTTGGCGTCCGACTTCGAGGAAGTAAGTAAAAACGACCTGCCTCCCGCAGAAAACCGCAGCTCACGCTCT # Right flank : TTGAGTGGGCGAGGGAAGGGGTGTTCGGTCGGGGCGTGCCGGGGGGTGGGGGTATCTGTTCAGAGTTGTTGAACGGACGGTTCAATACAGTCTGTTGCGTAGGCGTGGATCGGTGCGGCGGGCGGCCCAGAGGATGGTGGTGCGTTGCATGGTGAACGTCTCGCCGGTGGTGAAGAGGAGGCGTTTGCGGCCGAGACCGGTGGCGACCATGTCCTGAACGGTGTGGCACTGCCCGCCGATCATGATCTGGTCTCCGACGGCCACCGTGGTCGCGTCGACCTCCACGGAGATCAGCACGCCCTTCATGAGTGGTCCTCGCATGCCGGGACGCAGGCCATGAGCCGGTATCCGCGCACGGTGGCCAGCAGGCGGGCGGGACGGCGGCGCAGCCCAGCGCGGCACAGGACGCAGGCGCGGCCCTCGCGTTGCCGGGGCGAGAGATCGCGTTGCACGTCACCACCCCGGCCAGCGGCTGCGGGCCGCTCCCGGGCGGGCATCGG # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCCCGCGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 11 6071116-6071416 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 6071116 31 100.0 39 ............................... GCGAGATCACGGGGGACGTGGTCCGGGTGACGGTGCCGG 6071186 31 100.0 36 ............................... CTGAAAGGACTGCCATGGCTCCGTTGCCCAGGACGC 6071253 31 100.0 37 ............................... TGGCCCGCCTCAGCCGTATTCTCCCGTGAGTTCACCA 6071321 31 96.8 34 T.............................. CTGACACGTCACACAGACAGAGCGTCTGCTGAGT 6071386 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ======================================= ================== 5 31 99.4 37 CGTTGCGAACCCTCCGGGGTTGATGAGGAAC # Left flank : GTCCCGGTTCATCCGCGCCTCGGTGGGCGGCAGGATCGAGCGGGTCGAGTTGCACCCGCACGCTGCCGAGGTGCTGCGGAACATCGCGCGGCGGATCCTGGCCGACCCGGAGCTGGTCACGCCCAGCAGCGAGGCCGCACGGCTGAACCGCCTGGGGGAACTTTCACCGATCGATCACCTGGCCGTGATGTACGGGCGGAAGGCGCAGGGGCGCCCGTGGTACCCGACGAGCCTGCGCAACATCCTGCTGTCCGAGGCGACACTGGGCTACCTGATGCGCTGTCACCGGCCGGTTCTGGACCGCTGGGGACAGCCGGTGCGTCTGTGTGAGGGGGTGTGGGACCGTGCGACGCACGAGGAGCTCAAGCGGGTGCTGACCCCCCGGGAGACTCCCTTTGTGGGGCGGCGTTCCCATCGCGACTACATGCTCACCGAGGTGGCGCTGTGCCGGGGTTGATGAGGAGCCGGCACGCCGGCGGGAGGTGTGGGTCCCGACCTGT # Right flank : CCCGAGTGTAAAGCCGCTGGTCAGTCAGGTGGGTCGTGCTGTCTTCGTGGAGGAAACCGCAGCGGTCCGACGGTAGTGTGGAACCCCAGGTCAGAGAGTTGAAGGTGTTGACGTAGTCCTCAGCCACGTCGAGCCCATGAAATCAGATCAACGGTTGCCGAGTCGGCGGGTCCGAGGAACAGTGTCGCCACCTGTGCTGGTCTGACGATCGGTGTGATCATGCCGACTGCCACCGGTCGCGGCGGTCTCCATCCGGGCTTCAAAGCGCGGCCTTCTTCAGCGGCGACGGGGCGCCGGCCTCTGGAATCGTTGCCGGCGAAGCGGTCACCTGTCTGTGCCCACGGCTCTTCGCGGGTGGGCACAGACAAAGCGGTGCGGACCCCCGTCACTTGGCGGCGAAGGAAGCTCTGTGCCGCTCTCTGGCCGGCGGGCCTGTCGGCGCGGGCGCCTTGCGGGTTAGTCAGGCCCTGCGGCGAGATCGTGGTGCAGGGGGAGGGGGA # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTTGCGAACCCTCCGGGGTTGATGAGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 12 6083819-6084192 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 6083819 30 100.0 40 .............................. CGGCACCTGCGGAGGCGGCATGGAGACCTGCACCTGCGGC 6083889 30 100.0 38 .............................. TTCCTCGTCGAGGCGAACGACTTCCTGGCCGACCACGG 6083957 30 96.7 44 ..C........................... GCCGACGGCGACGTGACCCTGCGCATCACCCACCCGACCTACGT 6084031 30 100.0 35 .............................. CACCTCGCCAACGCCAGTGCCGCTGGCCAAGTCGA 6084096 30 100.0 37 .............................. GGCGACGGCTGGCGGCGCCTACACGACATGGGGGCGG 6084163 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================ ================== 6 30 99.5 39 GTTGCGAACCCTCCGAGGGTGGATGACGAC # Left flank : ACTTCTGGTCCACGCGCGCGATCAGGTCGGAGGCACCCACGATCTCCTTGCGCTTCGTAGAGCCGAAGATGAAGCGCTGTTTTCCCGAGGTACTGACCCGAACCAACCAGACCCGCATCAGTGGCCCCCCTCGCACACGGGCGCGCTGTACTGCGAGCCGCCCCCCGGGAGCAGCGCTCGGCGTTTCCTTACCAGAGCGGCCATCAACGCGCCGTCCCAGCCACCCACATCGACATGTCGTGCGCTTGCCCCCACCGAGAAAACCTCCGCGTCGTCGTTCTTCTGCCTGCACCTATGACAGATGGACGAGCGCGGATTGTTGGTTGGCGCTAGCGGGGTGGCGCCTGAAAGTCAAGAGGGCTTCTTGCTGCCCATGGGCCCGCTTTGAGTAAATGGCGACTCGCCATGCTCGCTTGGCTGCCCGGCAACTTCATGACGTTGCGAACCCTCCGGCGGATGACGACCCCACTCGGGCGGTGCGGGGTGGCCGAGGTTTCCGG # Right flank : CCCGACAGCAAAGTAGCAGGTCAGCGCGCTGTCACGGCGGCACCCTCAACTCGATTGTGCAGCGAGCCGTCGGTAGTGCATCTGCACTGGTCACAGCGTTGTCGGCGGTTGCCGTTCCGTACCGTGCACCATGACCGGTGGTCAGCTTACGGGGTGAAGCAGGGCGCGTTCGACCCCGTGGCGCACCCTGCTGACTCTTTCCCGTGAGGTGGCCCGATTGAGCAACTGGCCACCTGCACGAGTAGATCCGATGGCGGGCCGAGGACGGCGCGGTCGTCCGCGACGCGACGAAGCGCCCCCGCTGCTGCGAGCTCGCCCCAGGAGGAAGTGACCTGACCACACCACGGTGTGTCTCCCCGAGGTCGGCATGAACAACCGCTCCGCCCCGCCAAGCAGACTTGGCGCGGTGTTCTGATCCAGCCGCCGGCGTCCGTGAGATGTCGGCCGGTGCGCTTTCTCGTAGGCGCGCTCCGAGGCGAGCGCGAGGGCGAGGACGAACG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGAACCCTCCGAGGGTGGATGACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 13 6089003-6089289 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021121.1 Streptomyces sp. SCSIO 3032 strain SCSIO 03032 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ========================================= ================== 6089003 26 100.0 40 .......................... CGCGTCCGCTCCGGCTGATCGCCGCGGCGGAGAAGGTGCC 6089069 26 100.0 41 .......................... ACCAGCACCGTGGCGGGGTCGGTCACGCCGTAGGGGCGGCC 6089136 26 100.0 38 .......................... GTTGACCTGTGGTTCGGCATCTTCCTGGCCTACGTGCC 6089200 26 96.2 38 ..................A....... TCCAAGATCTGCATGTCCTGCTCGGTGCGCTCGGGGCC 6089264 26 96.2 0 ...........G.............. | ========== ====== ====== ====== ========================== ========================================= ================== 5 26 98.5 40 GTCATCCACCCTGGAGGGTTCGCAAC # Left flank : CAGTGGTGATGGGTCTTCCCGGCGTCGATACCGGCCCAGATCGCTGCCACGTGCTTCTCCGCAGGTCGTGTTCGTACAGTTACCACGGACGACCTCGCTGTCGAGTCCCTACTGAGCGATCAGTGCCGCGATTCCTCATGAGCAGCCGAGTCGTCGTGGGGCGCCGGGCGGCGAATCGTTGGAAGCCACAACTACGGCAGACGCCTGAAAGCCACACCCGGCACCCCTGGTTGAGCCAACCCTACGAATGGCTCGCTCAGCCCGATCAACAAGGTAGGGACGCCTGTCTGCCGCCATGGACGGTCGATCATCCTCAGAGCCCCGACCGGATCGTGCGGGAGGACTGCGCGAAGCCCGCTGGAGGTGGTGCCCTGGGGACGTCCCTGAGACATACTTGTCCAACGCTCTGACTTGCGACGATGCACTACCGACGGACTGCTGCACATGCCCTCACGTAAGAGCTGCTGGAAGGCTACGGTGACCAGCGTCTTTACTCTCGG # Right flank : CCGGTGGATGTGTACGCATAGATGTGCTGCCACAAGGGGGCGTCATCCATTCGATGTTCGGCCGCGTTGGCGTAGTCGAGGCCTGCCAGGCGGTAGGCAGCGGTGAGGTGTTCGGTCAGGTCCGCATCCGACGCGGCTGGCAGCCGGTCTGCGGTTGTCGGCTCCGCCCTGCCCGGCCGGTCACCTCACCTCGTTGCTGAACCGCCGCTATCCCCGTCAGGGCGCGGTCGGAGGCCTGCACGAACGCCTACAGCGCTACAGCCGCGAGCACCGCTTGCGGGGCCCCGCCCGCCACCCCGTCCGGAGCGTGAAGGAAGACGACGATGACCACCGAGCCCTCCGCCCAGCACGCACTCAACATCCGCAAGCCCTACTTCGACCTGATCGCCAGCGGATCCAAGACCATCGAGATCCGAGTCGGTTATCCCAAGATCCGCAAAATGGGCACCGGCGACAGCCTGCGGTTCACCTCTCGCGACCACACCCTGACCACCCGCATC # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCCACCCTGGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //