Array 1 173277-172354 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000001.1 Phormidium sp. LEGE 05292 NODE_1_length_200965_cov_20.8367, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 173276 37 100.0 38 ..................................... ATGACATCTTTGAAATTACCCCAACAGTGCGTTATATT 173201 37 100.0 36 ..................................... TCGACGACCTCTGCATCAGTAGCTATGAAAATTTCG 173128 37 100.0 37 ..................................... AAGAGTAGGCGGCTCAGTTATGTCGTAAGGCGGTCTC 173054 37 100.0 37 ..................................... GAATCTATTTACTCAGTCAAGGCGGATTCTTGGCTGG 172980 37 100.0 32 ..................................... CTAAACCTATTAGGCAATAGATACAGATCAAT 172911 37 100.0 38 ..................................... CTGCACTAGTTAAAGAAGTTTCTGAAGATATATGGGAG 172836 37 100.0 40 ..................................... TCCGATAATTTCATAATAAAGCCTGGAGCATAAAATTTAA 172759 37 100.0 36 ..................................... AGCAGTTTTGGAGAATCGTTCTGCTATATAGTTTTC 172686 37 100.0 39 ..................................... AGTACAGTAAGGCTCATTTTGGTTTATAGGGGGGCCAAA 172610 37 100.0 36 ..................................... CTTTTCCTTTTCTAGCTTACCTCTGTGCTCCCTGAA 172537 37 100.0 39 ..................................... CCATTAATACCAACACTCAAATTACTAAACAAACCAGTT 172461 37 100.0 36 ..................................... TGCAATTCCTCTCTTTCCTACGCTCTACCCACTCTA 172388 35 89.2 0 ............................--...G..C | ========== ====== ====== ====== ===================================== ======================================== ================== 13 37 99.2 37 GTTTCAACTACCATCCCAACTAGGGGTGGGTTGAAAG # Left flank : TATCAGTCTCGTGTAAGCAAAGCTTGAAATAAAGCTAAATCCTGGCAAATATCTGAACCTTGACAGTAAAATAGTTAATAGCGCCGCAGTTCATGCTTTTTAGCCTCTGAGCTGTGAAAAGTATGGGTTAGTTTGGCTGTCGGAAGACAGTCTTGCTTTCTGACCCTGGTAGCTGCTCACCCTGATGCTGCTGTCTGTCTTTTGACAAACAGGATAGGTGCGCTCCCAGCAAATTGGGTGCAGATATGCTGCTGTAGTGGCTACTGAATCACCCCCGACCAAGGGGGAATCTACCCTCAATTTTCCTTATTTCGTGAACCGAAGCGGGGGTCAAATCCCCAGGAGGTTTACGAAAACCTCGAACCCCTTATGGGTTAAGGATTACAGTCTTTTTGCGGGATGGTTGCTTCTCTGTTTAAGGCAGAGGTAGCACAACAAATTTAGAGGTTCACGAAAATCGCCTCTAAAAGCTAGTTCAGGTAACTGTTTTAGCTGCCGTT # Right flank : TATAACAATCGCAGAGGATAAATATAATAATAAGTAGTTGGTAGATTGAAAGACCGTGGGTTCAAATCCATCCTCATTAACTTGTACGACATTAACGTGCGAATAGATAGGAGGTGTCAATTAGCGACATGAATTTGCGAATTGTGTTAAGAAAGTTAACAAGTCTGCTAATCCCGACACTAATCTGCGAACAGCGACATTTAATCTGCGAACGTACAAAAATCTTTATCCCAATAGCTCTAAAAAACTCAACGGAGAGGGTGGGATTTGAACCCACGGTGACATTGCTGCCACACTTGATTTCAAGTCAAGCGCAATCGACCACTCTGCCACCTCTCCAGGCACATTTGTTTATCTTATCAGGAATAATTACAAATGACTACAGGCAGTTTGAGTTTCCGTTGGCGAAAGTTGATAGAGAATTTGCTCGGAAATCACGCTATAGTCTTTGTCTACCCAGACTAAGGATGCTTGAGTCACAACACCAGCTTGCAATGTCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACTACCATCCCAACTAGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 2091-154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000020.1 Phormidium sp. LEGE 05292 NODE_20_length_75643_cov_15.4653, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 2090 37 100.0 39 ..................................... GCATGAATGTTACGACCAGTCACGCCCCAATAGGTACTC 2014 37 100.0 33 ..................................... TTTTATTATGATTCGTTCTCCGATATAAAAGGA 1944 37 100.0 37 ..................................... GACCCAACTTCTTCCCCGATTGACGATGACGGCTACT 1870 37 100.0 37 ..................................... CTCACGCAAATCACCCTAGTCGATAACTTGTGCAGAA 1796 37 100.0 42 ..................................... TTGGTGGTGTTTACGACGAACTAAATATACCTCTTGATGGTT 1717 37 100.0 35 ..................................... GTACTTGAATCACCCAACTAGCGATGTAATTGATA 1645 37 100.0 36 ..................................... TTTGTGCGACAGAACAAGAAAAGCTATTGCAAAGGG 1572 37 100.0 38 ..................................... AACAGGGATATCTTCTCTGTTTATGTCCCCTAGTCCGT 1497 37 100.0 39 ..................................... ATTAGCCATTACTAAAGATTCCTGCATCGCGATCGACGA 1421 37 100.0 36 ..................................... ATCTACTCGCGATCGTATCCTTTCCTCTCTTTCCTG 1348 37 100.0 37 ..................................... TCTCCGTCAGGTGCTCGTTTTACTGTCCAGACTTCTC 1274 37 100.0 38 ..................................... ATAAATACCGAACCTATAGAACCTGCCATAACATAAAG 1199 37 100.0 35 ..................................... ATTAAAAGATTAATGCAGCTAGAACTGTTTGACTT 1127 37 100.0 36 ..................................... TAAATATTATCACCTCAATTCACTCTGAGGTGTAAA 1054 37 100.0 36 ..................................... TGCCAACTTTGATTGTTGGTGATTTCTTCCCATTTC 981 37 100.0 33 ..................................... AAACTTTTTAATTGACTAACATCTTTCTTAGTT 911 37 100.0 35 ..................................... AGCATAAAGCCATTTGGCGCTGGGGAAATTTTCGG 839 37 100.0 34 ..................................... GACCCATTACTTCATAAAATCAGAGAACTAGAAT 768 37 100.0 33 ..................................... ATCTAATTGCTGTTGTTGTAAGGCTTTCTTTAA 698 37 100.0 35 ..................................... ATTCCTAACACCAACGGCAAAGCTACTTTATTAAA 626 37 100.0 35 ..................................... ATTGAATCCGAGGCTGAGTAAATTTATCGACAACG 554 37 100.0 34 ..................................... ATTTTATAGCTGCAACATTTTTAAAAATCTTCTG 483 37 100.0 33 ..................................... AGAGCTATATTTTCGATGCTGGGGTTTCTGTAG 413 37 100.0 38 ..................................... TTTTTATGGTTGGAACTAACTATAACTAACCTTCAAAG 338 37 100.0 37 ..................................... GTTTACAAAACCAATAATTCCTTGCAACTTCAGTTAG 264 37 100.0 37 ..................................... ATTTGGGGTTAAAGTGTAAACAAGGTTGAGAAGCAAG 190 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 27 37 100.0 36 CTTTCAAATTAATGAATCCTAGTAATGGGATTGAAAC # Left flank : AGCCAAACTCTATTTTATTTGATCGTTTATGACCTACCTAACAATAAAGCAGCAAATAAACGACGGAAACGATTGCACGATCTGCTCTGTGGTTATGGAAATTGGACTCAATATAGTATTTTTGAGTGTTTTTTAACCGGGATGCAGTTTGCTAAACTCAAAGTCAAGATTGAGGAATTAATTAAGCCAACAGAAGACTCCGTGCGTATTTATGTCTTAGATGCAGGTGCAGTGCCCAAAACAATTACTTATGGCGGAAATAAGCCTCGACAGGATCAGGCGATCGTTTTATGATTGGAGGTAGGGTTAATTTGATGGGTCAAAGCGTGGGCGAAAATCCTGGAGAGCCGTCAAAATGCTAAGAACCTTGAAAATTAAAGATTTGAGCATTTTAGGGAAATTCTTAACTTTTGCTCATTACCCTATTTCAGCCTCCTAAATTTGGGAACCGTCAGAATCAGTTCTGGAAATCTCTTATACAGGTTATTTCAGAAGGCAGG # Right flank : CTAAGGAACAGTCAGCATCTATTTTTTAACCCACATTCCGCAGAAATGACTCAGATTTACTAATATTTTTGAAAAACTTACTATAAAAAATTATTTTATCCGCCTTATTTTAGGTGTAAATTCATTTTTGATATTCCTGATTAGGGAAAATTAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAATTAATGAATCCTAGTAATGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.20,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 21504-20600 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000034.1 Phormidium sp. LEGE 05292 NODE_34_length_55661_cov_22.0665, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 21503 37 100.0 36 ..................................... ATCATGCTGAATTTAAGAGGACAGCATGACATGACC 21430 37 100.0 35 ..................................... TATTAATTAATTCAAAATGGGAATAAAAGTAACAA 21358 37 100.0 37 ..................................... AATCGCAAACTGGCTACTATCGTAATCAAAATTTAAA 21284 37 100.0 35 ..................................... GCATTGGCATCAAGAATAAAATTGCGTTTGATACC 21212 37 100.0 35 ..................................... TACAGCTTATCCAGATTCAATCATAAGCCGATAAT 21140 37 100.0 38 ..................................... GCTGTAGTTCCCCCCAAGACTTCACTCCCCAAGTACTA 21065 37 100.0 36 ..................................... TTTTAGAATTATGGATGATAATTTTAATACTCAAAC 20992 37 100.0 33 ..................................... AATTAATAACCAGTTGACGTTGTTGCCAATCTT 20922 37 100.0 35 ..................................... TAAGTAATAAGCATCTCTAGCCTTTGCGTAGTCCA 20850 37 100.0 35 ..................................... CCTGGTAGCCCGCAACAAGCCGCTTTGCAAATCGG 20778 37 100.0 34 ..................................... GCCGAGTAAACAATTTAAAAACCAGGGGGAGAAA 20707 37 100.0 34 ..................................... TACTGGGTAGAAGCCGCGCCGGACATCGTGAATT 20636 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 13 37 100.0 35 GACGGAAAAAACATTAATCCCTATCAGGGATTGAAAC # Left flank : ATTTCAGATGATAATCGACGCACGAAAATTCACAGCATTCTTAAATCTTATGGTCAGTGGATGCAGTTTAGTTTGTTTGAATGCAATTTGACTGATACTCAATATGCTAAACTGCGATCGCGCCTCAAAAAAAAGATTAAGCCTGACCAAGATAGCATTCTGTTCTACTTTCTCTGTGCTTGCTGTCACGGTAAAGTAGAAAGAATTGGCGGGGAAAAAGTACGCGATGAATCGATTTTCTTTGTTTAAATGCGCGGATGGGTGGGTGTTCGTTTTGGTGGTGGGTATGAAATTGGCTCAAATGCTTTTACCGCAAGGTTTTAACCACTCATCTACCCTGTTTCCAATCCGCGAACTCTCCAAAACCTTTGTCTGACTAGGTTTTCTGCTATGTTTACAATTCTTGATTTTTCAAGTTACTGGTTTCGATGTTATAATTTTTTTCATTCGCGGTATAGCACCTTGAAAACTTCATATATTCTACTTTTCGGGTTTCCGCA # Right flank : AAATATTCCAACAGTTTTAACTTTTGATAAACATTTTGTTCAAGCTGGTGGTCAAAAAATGAGCATCCAAACCTACAATTCCACTAATAACATCTTTACCAACGACCAATAACAAGTAACCAATGATTAACAACTTATCTCTGTTTAATTACTACTAATGTAATATCATCAAATACTTTTTGTTCATTGATATAACTCATCAGATCGTCAATCACAGCTTGACGAATTCCATCAGCTGAAAGATGATGATTTTTTTGCAGAATTGCATAAAATTTTTCTAAGCCATACAGTTCATTTTGCGAATTTACAGCTTCAGTAATACCATCAGTATAGAGTACAGCAACTTCTCCCGATCGCAAAGTAATTTCCACCTGTTGAATAAACGGTGTAATATCTGGTTCTAACCCTAAAGGAAAACCTAAGTCAAAAGTATCAATTCGTTCAATTTTTCCATTATTTCGCACCACAATTAACTCTTCATGTTGTCCACTTAAACGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACGGAAAAAACATTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 1 14489-19749 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000049.1 Phormidium sp. LEGE 05292 NODE_49_length_42966_cov_18.5628, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 14489 37 100.0 34 ..................................... CTCTGCCTACACCCTTAGAGCAGTGGAACTTACG 14560 37 100.0 34 ..................................... AAGTGCAGCCGGAGCGATAACCGCCTTTGATAGT 14631 37 100.0 35 ..................................... ACCATCATTGAGCAGGTAGTGATTGGTGTAAACGT 14703 37 100.0 38 ..................................... CAGCAGTGATTATGATATCTTGCGGCGAATCAAATATA 14778 37 100.0 34 ..................................... CTTAAAATCCTACATTCTTTTTTGCAATAATATC 14849 37 100.0 41 ..................................... AGGATTTTTATTGGCGAAATATCGATACAGTGCTTCCTCTA 14927 37 100.0 37 ..................................... AAGATTTATGGGTTTACCTCCTAATTTTTCAGAATGG 15001 37 100.0 37 ..................................... ACGACTTGCCAGTGGACGACCAAGGTAAGGCTAGCGC 15075 37 100.0 38 ..................................... TTGGGGTAGCTGCCCTTTTTAGCGTCTACCAACTATAC 15150 37 100.0 33 ..................................... ATGAATGTATGCCTCGTGTTGTACTGACATCTA 15220 37 100.0 39 ..................................... AGCCACAAAATATTTGTAATATGACTTACATTCCCAAAC 15296 37 100.0 40 ..................................... TAAAGACCAAAGTAAACATCAATCACTTACTTTGGTCTTA 15373 37 100.0 35 ..................................... AATTCCTTCTAAATCTGAAATGGCATTAATAGATA 15445 37 100.0 34 ..................................... GTATTCCTCCGGCGCTGCCCTAAATGTAGTTACG 15516 37 100.0 34 ..................................... TTTTTACCAAACAACAATTCCCAAGAAGACCCAT 15587 37 100.0 40 ..................................... CCGGCTCCTGGGCTTCGCTGGCCTTTGCTTTGGGTCTGGG 15664 37 100.0 41 ..................................... TATTTTTAGAAATATGACTGAGATACCACCGCAATATAAGG 15742 37 100.0 39 ..................................... CATATAAACAGTTTGCGAATTGAACCTTGGTGGATAGGA 15818 37 100.0 38 ..................................... TGTGCGATCGCTTTTAAGGCGGCAATCTTTGCTTTTGG 15893 37 100.0 34 ..................................... GGCAGTATCGGAGTAAAAGATGTTGGGGCAACAG 15964 37 100.0 41 ..................................... ACCGGACGACCGTCGCGGCTGTGACCAACATCGGTGGTATT 16042 37 100.0 42 ..................................... ATTGGCTATACTTCCCATTATTTAGCCGATATGTTCACTAAA 16121 37 100.0 35 ..................................... GTAGTAGCCGAAACGAGGGAAGCTTGTGGAAGACG 16193 37 100.0 36 ..................................... TGAGAACCCGTGCGATTATCCTGGCGCAAGTTTATC 16266 37 100.0 36 ..................................... TGAAGAATTTCCGAATCGACAAGATCTCTAATCTTT 16339 37 100.0 38 ..................................... ATCGAAATATACACAGTAACAACAAAAGAAACGATTTC 16414 37 100.0 33 ..................................... AGAGAGCGAAAGACTTGCTACTTTCCCCTGACG 16484 37 100.0 35 ..................................... TTTTAAAGCTTCATTCAATTTTTCTTCATTGTCCA 16556 37 100.0 34 ..................................... CAAATCAATGTCATTGAAGTATTCTCTTACTCTT 16627 37 100.0 33 ..................................... AAAAATTCATATTTGCGATACAAAGTATTGAGA 16697 37 100.0 39 ..................................... TCAAATCAGATAAAGAAAATCTACTTGAACCAGAATCAA 16773 37 100.0 37 ..................................... AGATTCAAACCAGATAATCAAACAGCGATGTCTTAGC 16847 37 100.0 36 ..................................... GTAGTCGCATCCATTCCCAAGGAAATGGGATGATTC 16920 37 100.0 37 ..................................... CAGACGCTCAACCACCCGAAACTAAGATTGATGCCAA 16994 37 100.0 37 ..................................... AATTACCACAGGGGGACGGGGCGGGGGGAGGTAAAGC 17068 37 100.0 35 ..................................... CTGGTGTTATTTGGGTTTTCGAGTCTGAGTCTAAT 17140 37 100.0 35 ..................................... CTAATAGCATCCGGGCCCCCATAATCAGGGCTAGC 17212 37 100.0 40 ..................................... TGCTATGCTGCGGATGCTCCAACGGGTAGGCCGATCGGTT 17289 37 100.0 42 ..................................... ATTCCACACCGGGATTGAAGAGGCTTGGGCACCGCTACTCGT 17368 37 100.0 36 ..................................... AAAACGATGATTTACTGCCCAATATGCCACAGTAAA 17441 37 100.0 35 ..................................... GAATTCTAGGGAGTCGTTTCATTTGTCCATAAACC 17513 37 100.0 36 ..................................... GCGATCGCACTTCTCACAGGCTTAAGCTGCGATCGC 17586 37 100.0 41 ..................................... AAATATAAGATGCGCTCAGAACTGTACTTTCTGGGTTGCAG 17664 37 100.0 36 ..................................... TGGATTTTTGCAATTTTAGCTTATCCAATTATTTGG 17737 37 100.0 35 ..................................... GATTTCTTTTACAAACTCATCGATAGACAACGGGA 17809 37 100.0 37 ..................................... TTAGCTATTTTTTGTTGAAATGGTTGGGAGCCGCTTT 17883 37 100.0 35 ..................................... CTCTCCAAATCACTCACTGGGGAATTGCGATCGAA 17955 37 100.0 33 ..................................... TTAAGCATTGAATAACTTATCTATAGCCACAAA 18025 37 100.0 37 ..................................... CGTAATAGTTTATGGGTGGCATAAGGTTTTGCAGGGG 18099 37 100.0 33 ..................................... CAACTGTGCATCAGAGCCATCGCATCATCGCTT 18169 37 100.0 35 ..................................... GCCAAACGACAATCTGAAAAACGTTAAGCAAGTCA 18241 37 100.0 34 ..................................... ACCTGATCGAATAACTGCATATTTTTTAGAAGAA 18312 37 100.0 36 ..................................... CCATGCCGAAAATTCCAAAATGATGAGTCAGGGAAG 18385 37 100.0 34 ..................................... TGCAAATTTAAGGATTTATTCTTTGTAGATGCTG 18456 37 100.0 38 ..................................... ATTTTGCTTACTATGACTATTAGAAAAGATGGACGATT 18531 37 100.0 38 ..................................... GACAATTCGGATGAATTAGAAACAGAAACAAGCAACAC 18606 37 100.0 43 ..................................... TCTTTAAATCCAGGATCTTCAGGAAGCCAAATTATGATCGGAA 18686 37 100.0 41 ..................................... AAATCCCTCAGTAACCTAATATTTCCATGCTGATGAATGGC 18764 37 100.0 34 ..................................... GAATATCAGAAGCCTGTTCGCTTCAATCAGCAGA 18835 37 100.0 37 ..................................... GCTTGATTTTCTTCTTCTACTCTGCGTATGCGATCGA 18909 37 100.0 40 ..................................... AAAGTACAGCCAGCGATCGATCTAGATGAAATCAACTTTG 18986 37 100.0 40 ..................................... TCATCGAAAGGCCAGGAACTTGATTTTCCAAACTAAGCTC 19063 37 100.0 35 ..................................... TTAGGGAGAGGAGAGAAGAGAGAAGAGAGAGCGAG 19135 37 100.0 34 ..................................... GGGTGCAATTGCTTTCGCCATAGCTTTTTACCTT 19206 37 100.0 33 ..................................... TTACTCCTTCTTCAAGACAAAGGCTGATGAAAG 19276 37 100.0 34 ..................................... GAGCGTCTGGACGTGCGTATGGAGAGCCAGTGGA 19347 37 97.3 37 ...........A......................... TAAAGCTTTTAAATCCAAAACGTCAGCAGTGCCTTTT 19421 37 97.3 34 ...........A......................... ACCAAAGGCATAACTCTCCCGAACATAAAACACG 19492 37 100.0 36 ..................................... GAAAGATAAATCGCGCCCATCTGCTTAGCCCAATCG 19565 37 100.0 36 ..................................... TCTTGGCTCCAATGGCTAAAAAGATTGGAAGTAGCA 19638 37 100.0 38 ..................................... CCCACGTAGGCCAGGTGCGATTGCTCAATCTCTCGCAA 19713 37 83.8 0 ...........A..........A.......A...GGG | ========== ====== ====== ====== ===================================== =========================================== ================== 72 37 99.7 37 ATCGGAATTTCTACTAATCCCTTTCAGGGATTGAAAC # Left flank : CGCTTGATGCCAGGAATTAAACTAGAATTTAGTTAATGCTCGCATGGGAGATAAAAGAGCAGTAGTCAACCTCTCTTACTTGTGGTGGAAAACAGGAGTGGAAGGGGACTGGGGACTGGGGACTGGGATTTAGAGAGGGAGTAAGGAATTCATTAATTAATCAGCTTTACCGATCGCTATTATGTAAGAGAGAGTCAAAAACTCGACTGAGAAATTTCCCGATCGAGAAAAGGGACTGATTGAAGCTTTGGCGCGGATTGGTAGGTGTTTTTTTTCTTGGTTCATTTTTGGCGGCTGAAGTCTTTACTGGGCAAGTGTTTGAGTTTTGTTGTGGTGGCGATCGGTTCCGCGCAAAGTCTGAAATGCTTTCTATGCTTGGATTTGTGGCTTTTGGCTTGTTTCTCTGCTTGACAAGGTAGTGGCTAAAACCGTATTTTAATTATTGACTCGCGCAATTGCACCTCGAAAAGTAAATATATTAAGGTTTCTAGGGTCTTGCT # Right flank : GACAGGGTAAGGGAAAATTCTTTATTTACCCCTTCCCCGCCAAGAATCATAACAGACAACAGAAAATTTCCTGTAAATTGATTAGTTTATTTTGTCTCAGAAAGTGTGAGTAAGAATGCTAAATTTTCCTCAGTTTTTAAAGCGTGGGGAGCATGAGCAGGCATAAACACAAAAACACCTGGTTCTAAAGTAATATCTTCCCCTTCTAAAGTGAGAATTCCCTTGCCTTCAATCACATTAATTGTAGCGTTGCGAGTGGCAGTATGTTCTGAAATTTCTGTGCCACCCGCCAGACAAAACAGTGTGTACTGACAGTTATTGTCCTTGAGCAAAACTTTACTTAATACTCCTCCATTAGGATATTCAATTTGTTCTTTAAGTTGAGCTACAAAAGATGAGGTTGCTAAATTTGTAGAAGTCATAGTTTTTGCCTGTAGTAATTGATGAGTTGCTAGTTAATTTTTTTGAGCGACTAAAACGATGTAACCTAAATCTTGCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGAATTTCTACTAATCCCTTTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 1416-494 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000317.1 Phormidium sp. LEGE 05292 NODE_602_length_1969_cov_16.3833, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1415 37 100.0 34 ..................................... ATCCTACAAAAGATTTCTGTGATTGAAATTTAAA 1344 37 100.0 36 ..................................... GAATCTATTTACTCAGTCAAGGCGGATTCTTGGCTG 1271 37 100.0 38 ..................................... AAGTATTTTGGATTAGTCATAATTATTCTCTAAATAAG 1196 37 100.0 38 ..................................... GTGCAATTTTGGCGACCATAGCTTTAGCTAAAATTCAA 1121 37 100.0 38 ..................................... TTAATTAACGCACTTAGAACGCAAGTTAAGATATCAAT 1046 37 100.0 34 ..................................... TCTAATTTTCCTTTTGCTAAATATTTCCATTGAT 975 37 100.0 39 ..................................... AGAAAATAGTCAGGTTGGATGCGGATCTACTTTTAAGTT 899 37 100.0 40 ..................................... CTTTTTCCAAGCAAGCTAAGACGGTACTAGCAGCTTGCGA 822 37 100.0 37 ..................................... TTGTACAAGCAATCTAGGTGGAAATTATAATCCCGAA 748 37 100.0 36 ..................................... GTGGTAATTGGGGCGCGGGATAAACCTCTACTTTAG 675 37 100.0 37 ..................................... ACTGTAAATTGCCAATTTCAATTGTTGAATTTGTCGA 601 37 100.0 34 ..................................... ATCGCCCCTCTCGCAAAGTAGGGGCAACCACAAA 530 37 75.7 0 ........A......T.A..T..A...A.G....G.T | ========== ====== ====== ====== ===================================== ======================================== ================== 13 37 98.1 37 GTTTCAACGACCATCCTGACAAGGGGTGGATTGAAAG # Left flank : CAGTTTACCCAAGTGGTGTCTGACTGGATAGATATCCTGACCGTCGATAAAAACTTCTCTATGATAGATAAGTTTGATGAGGAATGAGTAGGAATTTGGCTATTTAATCAAGCTCTGAACTGTGAAAAGTGCGGGTTAGTTTGACTGTCTGCCGATAGTCTTGCTTTCTGACCCTGGTAGCTGCCCACCCCGATGCTGCTATCTCTTGCAGATAGGAATTAGGTGCGCCCCCAGTAATAAGGGTGTGGGTTTACCACAGTGGTGGCTACTGAATCACCTCCGAGCAAGGAGGAATCCACCTTAACTATTTTTTTCGTGAATCCAAGCGGGAGCAAAATTCCCAAGGGATAGACGAATTTGGTGAAATAAATAGCCAGACTAAGTTTGAGCTTTTTCTGGGATGGTCAACCCTCCAGTTGCGACAGTTTTTTCAGCAAAATTTCTGAGGTTCACGAAATTGTTTCTGGAAGCTAGTACACAAAAGGGTTGAAGCGTTAAGA # Right flank : TCTGCTTTCATCGGTCGTTAGGTCTTACAATCATGACTCCTCTCTCTTTAATACAAGGTGGATTGAAAGGCGCACCTCGTTCGGGATTTTCTCGATTTGTCGTTTTAGCGCTTGTTAGCGATAGAGATACAATTAAAGTAACCTCTTAGCCTTCTGTTTGAAGTTTGGAAAAGTATTCAACACCTTTGTTAAATATTGTTAGCACACTTTTTTAAGGACTTTAATGTGGCAAAGCGGTCATTAATTTGTCAATACGGACACGAATTTGTCAACGCGGACAAATAAAGTGGCAATCGATATTTAACTGGATCGGGATGACAGGATTTGAACCTGCGGCCCCCTCGTCCCGAACGAGGTGCGCTACCAAGCTGCGCTACATCCCGGATTTAACAAATCAGCTTTTCAATTATATCATAAATTAGGGGATTGGGGATAGGGGGAAAAGGGAAAATTTATTCGCTCAAAACTCAAAACTCAAAACTTCCCCCCCTGCC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACGACCATCCTGACAAGGGGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 16324-15709 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000062.1 Phormidium sp. LEGE 05292 NODE_62_length_37194_cov_22.6754, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 16323 37 100.0 35 ..................................... CTCCAGCCGCCATCATTTCTTCTGCTTGTTTTTCA 16251 37 100.0 37 ..................................... CACTCCAGCCGCCATCAGTTCTTCTGCTTGTTTTTCG 16177 37 100.0 33 ..................................... CAGACTCGCGAAGAAGTTATGGCAGCGCAATTA 16107 37 100.0 35 ..................................... TGTTCCTCAACAGTTAATCCAGTCTTTTTTAGAAA 16035 37 100.0 35 ..................................... GATTGTATCGTTATTTGTCGGCGGTTGGCAATATT 15963 37 100.0 34 ..................................... TCCAAATTGATTGAGACTCGATTAATGCTCCGGC 15892 37 100.0 37 ..................................... GTCACTTTTTTGTTAAGATTAAGATGTAGCATTTTAT 15818 37 100.0 36 ..................................... TGCGGAACCTACCACGCTCGATGTCATCCCTGGATA 15745 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 9 37 100.0 35 CTTTCAACCCACCCCTAGCCGGGAAGGTTGTTGAAAG # Left flank : TGGCAGGTACTTTGGTCGCGCTCTCAGCAGCAGCCATGTTGGTAGTATATTTCCTCATGAACAGTTACATGGGCTATTTATCAGAAATAGCTCAACGTCCTTGTCTACTGTACTAAAAAATTTGTCGCTCAACCCTTGACAAGGAAACCCAAAATCAGGCATTATAGAAAAGCGTCAAATGGGGCTATAGCTCAGTTGGTAGAGTGCTTCAATGGCATTGAAGATGTCAGCGGTTCGAGTCCGCTTAGCTCCATATAGTTGTGTCGATTAACACATTATTTGTCGTCGTTAACAGATTGATGTCGTCATTAACGAATTAATGTCGTTATTAACAGATTAATGTCGCTCAACTGTTTTCTGTCACTGTTAACAAATTAATGTCGTTCAGCACTTTTTACATGAGACATTACCTAAAATTTAAAGCCATTGAAGCACTCCTTTCAACCCTCCAGTTATTTAATTGCATTTTTATCAATAATCGAAATTACAGTATGAATTAT # Right flank : TCCGCCCGTCTAGAACCTTATTTTGGATAGGCTTCGAGACAGAAATTCGTGAATCTGTTTCAAAGCCTGTTAAATATTGCCTAAAACTAAGGTACTCACTACCCACTTTAGGCATCAAATCCATACTGGCTCAGGATTCGTGAAACCCCTGGAGTTTTCGCCCCCGCTTAGGTTCACGAAAAAAAAGGTTAGGAGGGTTCCCTCCGACGAAGGAGGGTGATTATAGTAGCCACCACTGCGGATAATCCGCACCCTGAATAGGGTTGAGGCTTTGGACTATGTACCTCGTCCTTATACCTTACTCATTATCGCTGGGAGCGCACCTTTCCTGTGTATCATATAAATAGGTATAGGGACACAGTACTTATCCCATCTATAGTGAGAGTACTAACTGTAGATGGCAGCATCATGAGCGGGCAGCTACTAGGGCCAGAAAGCAATCAAACTAACCCAGATTTTTCACAGCACAGAGACTCTAAAGAGCATGAACTGCGGCGCTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAACCCACCCCTAGCCGGGAAGGTTGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.50,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 6106-4135 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000069.1 Phormidium sp. LEGE 05292 NODE_69_length_34675_cov_13.7799, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================================== ================== 6105 23 100.0 51 ....................... ATCGAAGAACAACTGCAATTGCAGCGATTGTTGCGATCTTTCAAACCATCA 6031 23 100.0 52 ....................... AACAATTTGTATGTTGGATGGGGTTCCCAGATTGGCAACTTTCAAACCATCA 5956 23 100.0 51 ....................... TTTGCACGGATTTCAAAAGCAACAGACAAAGGGCAATCTTTCAAACCATCA 5882 23 100.0 54 ....................... TAAGAATAATAAGTCGTTTCAGTTACAGACTGAGTTTTCGCTTTCAAACCATCA 5805 23 100.0 62 ....................... ATGAATGGCATTAACCCAGATTTTATTCTATACTACGAATAAGTAACACTTTCAAACCATCA 5720 23 100.0 56 ....................... ATGAATGGCATTCGGGGAAATACCTATTAATAAAGAGAAATGCTTTCAAACCATCA 5641 23 100.0 53 ....................... AGATGAACGCTAATCTATGGGTGTACGATTTTTATGCCACTTTCAAACCATCA 5565 23 100.0 51 ....................... TTGTCTAGCAGGATTGTTCGGCCCAAAAATGTGAGTACTTTCAAACCATCA 5491 23 100.0 48 ....................... CAATTGAATTATCATTAATTGCTACTGGTTGGATCTTTCAAACCATCA 5420 23 100.0 53 ....................... CTTGATTATACGCAAGAGGGTATAATTCATCTGTTTTTACTTTCAAACCATCA 5344 23 100.0 50 ....................... CTTACGCTCTTTGCGTTTGTCGCTAGAATTTTTGACCTTTCAAACCATCA 5271 23 100.0 52 ....................... CCTTGTAAAGCACAGCATTGAGCGTGACAATAAGGCAACTTTCAAACCATCA 5196 23 100.0 59 ....................... ATACTATTCCTGTACTAGTGCCGCTTTTGCTTTGGGAAGATGAGCCTTTCAAACCATCA 5114 23 100.0 50 ....................... ATACTATTCCTGCTCTAATACCTTTACGCAAGGTTACTTTCAAACCATCA 5041 23 100.0 56 ....................... GAAGCCAGTTTCCCTGTCGTCGTAGTAATAGTAATAGCTCAACTTTCAAACCATCA 4962 23 100.0 50 ....................... GAAAAATTCTTTTATGGCTATAAAGATAAAAGTGATCTTTCAAACCATCA 4889 23 100.0 56 ....................... TCGTCCAATCCTTCGCCAAAGTTTCGGGCAGCAAAAGTTTTCCTTTCAAACCATCA 4810 23 100.0 50 ....................... CAGACTGAGCACCGGGAGCCGTGCCGAGTATGTCTTCTTTCAAACCATCA 4737 23 100.0 48 ....................... TTTATCTCAAGGGCTTTATCGCAAAGCTACAGGCCTTTCAAACCATCA 4666 23 100.0 50 ....................... CTTAATGTTTTGCGGACTTGCTCACCACAACTAGAACTTTCAAACCATCA 4593 23 100.0 52 ....................... CTAATTATAATTTGATTACCATTGTCGTCAATAATAGACTTTCAAACCATCA 4518 23 100.0 49 ....................... TTATTTTTCACTTTTTTTTCATTATTAAGATGTATCTTTCAAACCATCA 4446 23 100.0 50 ....................... TCTATTTCTTTTGCCTTAATTATTGATGTCGTTATTCTTTCAAACCATCA 4373 23 100.0 46 ....................... ATTTTCCCTGGGATTGATTCTTCGGAGCCGAACTTTCAAACCATCA 4304 23 100.0 55 ....................... TTAAAAAATCAACTGAGAAACAATTACAGTCTGAGCAAAAACTTTCAAACCATCA 4226 23 100.0 46 ....................... TCAGCTGCCCTTTGCAACTCGTTGCGGTAATGCTTTCAAACCATCA 4157 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ============================================================== ================== 27 23 100.0 52 AATCCCCGCAAGGGGACTGAAAC # Left flank : GAATGTTTTCTGACTACAATCCAATTTGTGAAGCTGCAACAGAAAATTGAAAAGTTGATTAAGCCAAAAGAAGATTCTGTACGCATTTATGTTTTGGATGCTGGATCTTTGAAACGCACCATTACTTACGGTTCTGAGGAACCAAGGCAGGAAATTGCGATCGTTCTTTAATTAATCTAGAAGTCTAGCAATTTATTCACCTGAAGCCTGGTTTCTCTTTTGAAGCCAGGTTGTATAACATAAACGGAAAATATTGACAAGAGAATGCTGCTGATTTATCATAGTTTTCGTGAACCCAAGTGGGAGCAAAAACCTGGGGGGATTCACGAAAAAGCTTAGAACCTTGACAATTAAATAGTTTCAGTTTCAGTAACCGCTCAGTTATTGCTAATTAGTAGCAATAAGCTCAGCCCAAATGAGGTCAATTTTGCGATTCCCGAAAAGTGGTTTCATAAGCCTCGGTTAGTCAGGGTTTTGGGCGGCTGTCTTTCAAACCATCA # Right flank : TCATCTACTGCTAAGTCGCAGCTAATTTTTCAGGAGAGTTCTCTTCCATGCCCAATTTAAAATTAGACGACGATATATTGCGTGACATATTAATTCAAACTAAAGTCATTGCTGTGGTGGGACATTCCGACAACCCAACTCGCATCAGCTACCAGATTGCTCAATTCTTGCGGCAAGTAGGCTATATCGTCATTCCAGTCAATCCAACGGTGAGCAAAATTGATGGGCAACCTTGCTACGCTTCACTTCGAGATGTCCCCCAGTCAGTAGAATTGATCAATGTGTTCCGGCGCAGCGAGTACCTACCGGAAATTGTTTCTGATGCGATCGCTATCAATGCCAAAACCATCTGGGCCCAGTCAGGTATCTATGACGAAACCTCTGCCAAAAAAGCATTGCAAGCCGGATTAAAAGTGATTATGGATGCGTGCATCAAAGTAGAGTACAACAGGTTAAATATAAGTCGTTAGAAAATGTTATGGCTCTTCCCACGTCTAATT # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.42, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.10,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 32191-29755 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000069.1 Phormidium sp. LEGE 05292 NODE_69_length_34675_cov_13.7799, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ================================================================================================================================================ ================== 32190 23 100.0 51 ....................... CGTTATATTTTCTTAAATCCACTCCCAAATTATAAAACTTTCCATTGACCA 32116 23 100.0 52 ....................... CTTCCACCTTTGATACTGAAGTGGAAAAGATTAATTCACTTTCCATTGACCA 32041 23 100.0 52 ....................... TCGATATTTGTCTGCTATTGGTAACACCCATTGTTTGACTTTCCATTGACCA 31966 23 100.0 51 ....................... TAAAAACTAAAATTACTATCCTCGGAGCTAACACCAGCTTTCCATTGACCA 31892 23 100.0 53 ....................... CTAAACCTATTAGGCAATAGATACAGATCAATCACTCCACTTTCCATTGACCA 31816 23 100.0 50 ....................... AAACCAAGCAAATGACCTACCCAATTCTTAACGCTGCTTTCCATTGACCA 31743 23 100.0 53 ....................... ATTGATACTAGTTGGATTTCTTGTTGCGTCCGCTTCTAACTTTCCATTGACCA 31667 23 100.0 49 ....................... GGATTAACGGACGCGCCGCTCAGATTTTTTCATAACTTTCCATTGACCA 31595 23 100.0 52 ....................... ATTATCCCGTTGTACTCGTCCCTGGAATTGTGCAGAAACTTTCCATTGACCA 31520 23 100.0 53 ....................... GTGTTAAATACTTTGGATTTGACATTTTTATTCCCTAAACTTTCCATTGACCA 31444 23 100.0 52 ....................... GACCAATACATGATACAAAAACCGCACCAAGGAATAACCTTTCCATTGACCA 31369 23 100.0 55 ....................... GTTTTTACTTCAATCTGAAAATTAGAGAAAGGAAAGTATAACTTTCCATTGACCA 31291 23 100.0 54 ....................... TAAAATCGAGTGATTTTCTCCTCGATTTTAATTTCTCCTACTTTCCATTGACCA 31214 23 100.0 51 ....................... ATTGAATCCAATTACTATTGAGCCGTTAATTATTTTTCTTTCCATTGACCA 31140 23 100.0 51 ....................... AACTGTTTACACTTTTCTTTCATCGTGCAGACTCAACCTTTCCATTGACCA 31066 23 100.0 53 ....................... CAGCAGAGCAGGATAGTGAGCAAAATATATTCGGCGCGACTTTCCATTGACCA 30990 23 100.0 48 ....................... TGATTAGCACGTTGAAGGGGACCCGACGAACCAACTTTCCATTGACCA 30919 23 100.0 47 ....................... AAATATCTCGCTGGTCTTGAGTCAGGCCATCATCTTTCCATTGACCA 30849 23 100.0 51 ....................... TTCGCTCAAGAATTAGCGAGAATGAAATTTGGTTTTACTTTCCATTGACCA 30775 23 100.0 48 ....................... TAATTTCCTCCCTTTAAATCTTATGAGGGTGGCGCTTTCCATTGACCA 30704 23 100.0 50 ....................... ACGAAGGGGAATAGAAAATCGAGAAAAAGTAGCAACCTTTCCATTGACCA 30631 23 100.0 57 ....................... TCTAGAATTTGCTTAGGTGATTGAGGTTCGGCAACTGCTAGAGCTTTCCATTGACCA 30551 23 100.0 56 ....................... TTTCAACTCAAAAATGGATCGACCCCTGAAGAACCTCAATGGCTTTCCATTGACCA 30472 23 100.0 55 ....................... ATTTCCATTTCTTTTTCCTTTTCAATTACAATTAACGTGAACTTTCCATTGACCA 30394 23 100.0 56 ....................... TGGCAATTGGAATTGGCGCAGTAGCACTAGCTTTTAATCCAACTTTCCATTGACCA 30315 23 100.0 52 ....................... CAGATTTAATCTGATATTGGTACATCACTTTGTACCAACTTTCCATTGACCA 30240 23 100.0 50 ....................... TTTTTCTTTCCTGTTATTCTTTTTATTTTCTCGCTCCTTTCCATTGACCA 30167 23 100.0 48 ....................... GATTCCGTCCAAATTTTAAGGACAAACCTTTAATCTTTCCATTGACCA 30096 23 100.0 55 ....................... ATCGAAAGTAGAGGAGCGATCAACGCTTTAAAAACCCTAATCTTTCCATTGACCA 30018 23 100.0 51 ....................... TATCAGTTGATGCAGCTGATAGCAGTTTGACCGTAGACTTTCCATTGACCA 29944 23 100.0 144 ....................... CTTGCTTGCTAATGCGATCGCAGCAAGAAAGCTTTTGCAGTTGTTCTTTTTTTCTATGTATTAACGGTTGGGATTGCCGAATAAGTTCGCGTAGCGTACCGTTAGGTGTATCGCACTAATCTTTTCCTAACTTTAGGCTAAAAG 29777 23 78.3 0 ........T....A..TG...T. | ========== ====== ====== ====== ======================= ================================================================================================================================================ ================== 32 23 99.3 55 AATCCCCGCAAGGGGACTGAAAC # Left flank : TTCATGTACAAGACTTCAATAATTGAAAAAGAGTTAACAGTTAAATGTAAAAAAATTAGCTTTAATGAATTGACTATTTAACTATCAGTAAGCTAATACGCATTTAAATTTGGAGTTTTGAAGCCTAAACCTCTTGCTGCAAGGGTTTCAAACAAAAAATTTAAATGCTTAACAGCTTACAACTAATAAAATATTTGAGGGGAAATTTTGCTGGTCAAGCTGTAGCATAGAGCAATATCATAAATACAAAGCATTGACAAGAGACTTATCTTGATTTACGATAAATTTCGTGGATCGAAGCGGGAGCGAAAACCTGGGGGGATTCACGAAAAACGCCAGAACCTAGACAATTAAATACTTTCAACATTCGGAGTTTTCAGATTATTGCAAATTACTTGCAATAATGAGGGCGGAAATGGAGCTAAAAATGAGATTCACGAAAATTGACTTCATAATGCCCTGGCTGTCTTTGTTTCAGGAGGCAGTCTTTCCATTGACCA # Right flank : AAAGTAAAATACAAACAGCAAGAATTCGGCAGTCCTCTGCTCAATCACAATGCCTCAACCTGCCAAAAGTCGCCGCCAACAAAAAGAATCAGAATCACCTGACCTCACTTGGTCAAATGATACAGAACTGCTGGGACTAGTTTTTGAATTACAACCCAAAACAGACGCTTCCTTATATCCGCAATATACGATCGGACTTCATGCCTGGTTACTTGACCAAGTGCGTTCGTTCGATCCAGAATTATCCGCATATCTTCACGATGGACAGTCAGAAAAACCTTTCACCATTTCTGGATTAGAAGGCGCATTAGTTCCCATTGGCAAAGAATTTCAGGTGCAAGCATCGCAAACATATCGTTGGTATGTGACAGCTTTATCGGCAAAAGTCGTGCAGTGGTTGGCACAATGGGTGAAAGTATTACCAGAAGAAGTGGCGCTGCGAAATGTGCCATTAACAATTCAATCATGTAAAATCGCTCTGCCAGCTACTACTTATAAAC # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.40, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.10,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 8351-6019 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000076.1 Phormidium sp. LEGE 05292 NODE_76_length_31835_cov_21.9357, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 8350 37 100.0 37 ..................................... AACCCTTTATGGAATATTTAGTTTTGCTGTTGTAGAA 8276 37 100.0 39 ..................................... TGAGCAATTTAATTCCTTTAAGGATGTTGGCTATCTCCC 8200 37 100.0 35 ..................................... TCACATAAGGGGGTATTTCTGCACAACTAGTCAGT 8128 37 100.0 40 ..................................... TGCGCGGAATCGCTAAGGCATACCAGTTTAACTGGAACAT 8051 37 100.0 36 ..................................... CTTAAACAAGGTAGCCGACCATCAGCGGTAATCTGC 7978 37 100.0 41 ..................................... GATCGCCATTCCTTCGGGTGAAGTGAACAACAGCTGATCGG 7900 37 100.0 33 ..................................... ATTAATGCGGTTCCAGATGATTTATGTGCTATT 7830 37 100.0 37 ..................................... GACGGGACTGGCAAATCAACAGTTTTCACTGTTACAC 7756 37 100.0 36 ..................................... GTAGTTGTTCGGTGTTGCCTGTGTTGCCTTCTTCTG 7683 37 100.0 33 ..................................... GGAGTTTGTACTTCTTCCAATTTGGCAATACTA 7613 37 100.0 41 ..................................... GACAGCTATAACTTGCCGCTTCCTCCCGGCTCCCTTATCTA 7535 37 100.0 35 ..................................... CGGGTGCTTCTTTCTGTGGAAAAGTCTTTTTAACA 7463 37 100.0 34 ..................................... AGCAATAACCCTTGGACTGAAGTGAAAGATTTAA 7392 37 100.0 37 ..................................... TTGATTGATAAGGGTTTCGCCACTTACCAGCTAGCAT 7318 37 100.0 44 ..................................... GCCCCTGACTTTGAACGTAACGTCTAACCGCGCTAGAGACGCTG 7237 37 100.0 42 ..................................... CGATTTGGTGATTTTACATAACTCAATACTGCTTCAAGAATC 7158 37 100.0 34 ..................................... AATTGATGGTTTTGACAGTCGTCAAACTTCTTTG 7087 37 100.0 41 ..................................... ATATACATACAAAAACTCAAGTCCGCGAAACAGTTAACAAA 7009 37 100.0 33 ..................................... CTTTTTTCCAATCTTCTAGCCTTTTTGATGGTT 6939 37 100.0 39 ..................................... TAATACCTCTCTCAATTCTTCATGCGTCATACAACTTCC 6863 37 100.0 35 ..................................... CCTCATAACGCACCTCTAGGTCAAGTGATTTAATG 6791 37 100.0 38 ..................................... CTTCTTCTAATGGCGCTTATTATATGCACTCCGTAAAA 6716 37 100.0 38 ..................................... ATAGGCATTAATCGCTTATCCCACTTACCCTGCTCTCC 6641 37 100.0 33 ..................................... TACATTCACCCAGCGCTTAAGGAATTGCTGCAA 6571 37 100.0 35 ..................................... GCTCAAAATATTCGGAAGATGCGAGAAACTTCTGA 6499 37 100.0 36 ..................................... TTTACAGTAAACAGAGAAGTCATCCGTTGACCCTAG 6426 37 100.0 36 ..................................... TGCTAATGGAAATCCTGTGGTCGAACAGTCTTTTCG 6353 37 100.0 36 ..................................... TTAAAAAGCTTAAGGGAGGGTTTATAACCCTCCCAA 6280 37 100.0 40 ..................................... AGCTAAAAATGCGGGAATTGATGAAGCGATGGGAAATCAA 6203 37 100.0 34 ..................................... TTGTTCAAAAGCGCCATATCGATGGGCAAGTCTT 6132 37 100.0 40 ..................................... GAGTACTTTACGAGAGTCACGAGCCGGAGCCAAGCCTTTG 6055 37 91.9 0 ................................C..CT | ========== ====== ====== ====== ===================================== ============================================ ================== 32 37 99.7 37 GTTTTAAACATCATTAATCCCTATCAGGGATTGAAAC # Left flank : TTTGTCCGTCCGCAGCTGTGAGTACTTCGTAGTCTTGTTCCTGTAACGCCATGACTAGCATTTCACGAATTAAGTCTTCGTCTTCTACTACTAGGATGCGTCTTTTTTGCCCGATTTCGGTTGCTGATGGATTTGGCGTTATCTCAAGGGAAAACATGATTAAGGAATTAGGTTCTCAGTTGTTCCATCCAAACAATAACGCGATCGGTAGTCAACAAGTGTGTGATTAAACAATTTTTTTCGCTTAAATGCGCGGATGGGTGGGTGTTGGTTTTTGTTCTGCTGATACAAGTGGCGCAAATGCTTTTCTACCAAGGCTTTAACTATTCATCTACCTGGTTTCCGACCCGCGCAAGTCTCCAAACCCTTGGCCCGATTGGGTTTTATGCTCTCTTTACAATTCTTGATTTCTTAAGTTAGGGGTTGGAATGATATAATTCTTTTGATTCGCGAAATCGCACCTTGAAAACTTCATATATTCTGCTTTTCGGGTTCCTGCC # Right flank : GTCTACAACTGTTTTATAGTAAGTTGGATTTAAGGATTTTTTTACCACAGATGTCCACAGATAAACACAGATGAACACAGATGTATATGTTATCTTTGGGCTTCGTAGTTATGTTTTTTTAGTACGCAGATGAAAGCAAATAAACGCAGATGAACGCAGATGAAGATGTTATTTTTATCTTCTGTGTTCATCTTTGTTATCATTGATTTAACTGAGTTTTTCTACTAGGTTTGCTACTCTTTCTTTGATTTGATCTCGCACTGTTTGAAAGGTTTCTTTTGATTTTCCTGCTGGATCTTCGAGTTGCCAATCTTCAAAGACTTCTCTTAATATCCACGCTTCTGGTAAGTTGACTCCACAGCCACATAAGGAAATTACTGCGTCGTAATCTTCGGCTTGAAAATCACTTAAGGCTTTGGATGTTTGATCGGTAATATCTATGCCAATTTCTGACATTACTTCTACTGCGTTGGGGTTAACAACGCTTGCTTCTAAGCCGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAACATCATTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 6572-2577 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000094.1 Phormidium sp. LEGE 05292 NODE_94_length_25262_cov_19.7603, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 6571 37 100.0 40 ..................................... CTGCAATTCAAATTGAGAAAAAAGCTTTAGCTTGGTAACG 6494 37 100.0 34 ..................................... AGTTGCGCCATTGTCGATATTTATCCTCAGCCTT 6423 37 100.0 40 ..................................... TTTCTATTTTTTGAGGAAGATATCGAACCAGTGCCGAGCG 6346 37 100.0 33 ..................................... GCAAAGCTTGTCGCTGTCGTTGCTGCAATTGGA 6276 37 100.0 36 ..................................... GGAACCGTTGCCAATTGAAGATGACCGGGACAAGGA 6203 37 100.0 42 ..................................... GACATATTTAACAAATAATAAAACACTCACTGTGCCAGACGG 6124 37 100.0 35 ..................................... AAACAAAATCCGCTACTGGAAACACCTCTGGCAAC 6052 37 100.0 38 ..................................... ACCAAAGTGGGAAGTAAAACTACCTCCCCCTGACTTAA 5977 37 100.0 42 ..................................... GCTGACTGGACGCAGGAGAAGGAAGCGCCGCAGGGAAACCTT 5898 37 100.0 41 ..................................... CAACTTGCGCCCTTTTACAAACTACTTCACCTACATTAATT 5820 37 100.0 38 ..................................... CATAAATTCTCTGTGCCCTTGGCGAGTCCGACCAACCA 5745 37 100.0 39 ..................................... GAGCATTTAATAATTGCAGAACAAGAGGAAAAGTTTAAA 5669 37 100.0 36 ..................................... GTGAAGACATTAAAAAATTACTGGCTAGAAATGAAA 5596 37 100.0 41 ..................................... ATTGTTTTTTTGGATGAATTCTTCGACGAAATAGAGCATTA 5518 37 100.0 36 ..................................... GATACTTATAATTTTTATAATAACTTGACCACTCAC 5445 37 100.0 35 ..................................... ATTTACCAACCTCCCATTGGATTCAATGCAGAAGT 5373 37 100.0 35 ..................................... ATTATTACTTGTGTGCGGATGATGTTTTTCGAGTT 5301 37 100.0 40 ..................................... GTAACAACCACACCAAAAGTGCAACGAGTTTTTGCACTTC 5224 37 100.0 40 ..................................... ATAGTTTACCGCCGTCGATAATCGTGGTTCGGAAAATGTA 5147 37 100.0 42 ..................................... TAAAATGGCAGCAGCCGCCGCCAATCCCTTTGCAAATATCTC 5068 37 100.0 40 ..................................... GAATGCTGATTAATTCTTTAATTCCCCAAAGAACTACGGG 4991 37 100.0 36 ..................................... GCCATACATTTTCCTCCAGCTTTGAGCCTCTATAAA 4918 37 100.0 35 ..................................... GTTATCAAGTGGTTTAGCAAGATTGATTTTGTTTG 4846 37 100.0 35 ..................................... GGAAGGACGCTGATTATTTGTAACCCAAAATTTTG 4774 37 100.0 43 ..................................... GAGAATTTCACCGAGAATTTAGTAGAAGCGGTACTAGAAGCTG 4694 37 100.0 43 ..................................... TAGACAATATGACTAGACCGCTTGACAAAAGACAAGCTAACTA 4614 37 100.0 42 ..................................... AGGCTGGATATGAAAAAACAACCCCGATATCCCAGGCAAAGT 4535 37 100.0 43 ..................................... GCGTATACCTCGATATAACTGCCAGTGGGTTTTAGTTCCTCTC 4455 37 100.0 33 ..................................... ACCAATGGCATATAATCCAGGATATGTGCCAAA 4385 37 100.0 40 ..................................... TCACTCAAGGAAATGTTTAGGGCAGTCGGTATTGATGTTT 4308 37 100.0 42 ..................................... TTGCTACTGCTACAGAAGAGGCAATAGAAAACATTAAAAACG 4229 37 100.0 37 ..................................... AACTACTCCAGCTTCAACCAACAAGGAAACACAACAA 4155 37 100.0 42 ..................................... TAACCCAAAGTATCTAACACTGCAAGAAATAGAACAAATATA 4076 37 100.0 37 ..................................... AAATCCTTCGTGGCCTGAGTAACTGTATTTTCTAAAA 4002 37 100.0 35 ..................................... TATCAATTGGTACTGACTCATAAAAAGACTTTGCT 3930 37 100.0 38 ..................................... TTGTCTCCCATCCTTAAAATATGGTGGTGTCTCACTCC 3855 37 100.0 37 ..................................... TTCTGGAAACCAAGGGCCTCTATCAAAAATCACCCCG 3781 37 100.0 34 ..................................... GGGAGCAGTACGCACAGTCTATCAAGATTGTATC 3710 37 100.0 35 ..................................... TGGCTTTGCCCGTCCCTTCACAGGCAATAATTCCA 3638 37 100.0 33 ..................................... AATATTGTTAGGATTTCTCAATGGTTGCATAAG 3568 37 100.0 42 ..................................... AATTTTATTCCCATTTTTAATTAACAGAATAAACTTTAACGG 3489 37 100.0 39 ..................................... TGCACAATGTCTTCACTCAACATTAGTGCATTATGAACA 3413 37 100.0 33 ..................................... TATTTCAACCAATGGTTTGAGGTACTGGATTAA 3343 37 100.0 34 ..................................... TGATTATCTGGTTTGAATCTAACCCAAACTTCGA 3272 37 100.0 34 ..................................... ACCAAGAGCATTAATAATCAAAGGTAATTGGGTA 3201 37 100.0 40 ..................................... ATAAGCGATCGTGCCATCGTGCCGACTAGAGAAGTTTTTC 3124 37 100.0 34 ..................................... AAACTTTTTAGTAATCAATTCTTTTGAATCAAAC 3053 37 100.0 39 ..................................... GGAAACTGGTTGCGATTATTTTTATGAAAGCATCCAAAT 2977 37 100.0 35 ..................................... CTGGCTGGGCGCGAGGAGCAATTGATCGATCGCAC 2905 37 100.0 32 ..................................... CGACAAACGGATTGTCGCGGTTGTTTCCAGAA 2836 37 100.0 38 ..................................... CCCCACCATTTCTCAAACATACAGGTGGGCTTCTCGTT 2761 37 100.0 40 ..................................... AGTGAAATTCAATCGGGGATGCCCAACTGGACGGGCGCAA 2684 37 100.0 34 ..................................... ATCTGTTTGCCCGTAGGCTATATCTCCGGCTGGG 2613 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 54 37 100.0 38 GTTTAAACTTCAATTAATCCCTATCAGGGATTGAAAC # Left flank : TGCTACTGGTCGGTAAGCGTCAAATATCAAAATTCGCCAGTTAGGATGGGTTAGCTGTAGTTGGTTTTGGGCTTGGATGAGGTTTTCCAGGACGGTTTCCCGGAGATAATAGGGTGAAAGTTTGCCGTAGGGGGCGCGGAGTTTTTCGTAAGCGTGGGGTGTTTGGGCAGCGAACTGTTCTAGGGGAATGGGTGCGAGGGGTTCGCCACATTCTAAAATGCGGATTTTTTGGTAGGGTTTGATTGTCATGTTGCGCGAATGGGTGGGTGTTTTTGGCGAGTGTTGTTTGTTTGTGCCTCAAATGCTTAATGTACAAGAGTTTGGGGTTTTTATGGGGCAAATGTTATCCGCGCAAAGTTTGTAATGCTTGTGGTGTAAGGGTTTTGAGTAAAATGCGTTGAACAGGGATTTACAGGCTGTAGGCTGAAATGATAAATTTATTCTTGTCCGCGCAAATGTACCTTGAAAATTAAATATCATCAGGGTTTGGGAGTGCCGCA # Right flank : GACTAGCTTTTACCTGTTGTTGATATTCAAAGATACTTATAGATTGACTAGAGGTTAAGCTATAGCATATCCAGTATATTGTCGTACATTAGGCGCATGAAAAGCCAAAACAATTTTATCTTTTGGAATACCAGCGGCAACAAGTTCATCAGTAATGCCGTCTTCAATTCCATCTCTTTGAATCCAAATTTTATCGTTAATGATTTCGACGTGAACAACACAACCATGAACTCTACGTTTGCCGTCCCAACCCACTACTACGATCATAAAGTTATTACGATCGCGATCGATAATTAATTTACTTTCAATTTCTCCATGACTGTAAGGAATGCGATGATGGGCTTCTAGAATACGTTCAATAATATGGCGATATTCTTCTACTCTATCCATTGGACAATCTCCTCTGTTTCTGGATCGAAAATAACTAACTTAAGGTAGTTATTTTCTACTACCATTTTGGCAATTTCCTCTTGAAAGAAATCGAGATAAACTGATTCTGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTTCAATTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 1 11245-10988 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWG010000168.1 Phormidium sp. LEGE 05292 NODE_168_length_12664_cov_19.5959, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 11244 37 97.3 37 .............T....................... ATAAGAATTGGCTGATTCGTACTAAAAATAATAGAAT 11170 37 100.0 34 ..................................... CGTTACAGCACGGGAGTAGATTTTGAGATGTCTG 11099 37 100.0 38 ..................................... AAAATTCCATAAAAATCTACTTGTAGCCCAAAAAGTAC 11024 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 99.3 37 ATTGCAATTTCAACTAATCCCTATCAGGGATTGAAAC # Left flank : GTGTGTAGCGCCGTTCCGTTCCGCCCCAATTGCAATTTCCCCATACTTGGGGACTGATTTGAAATTCCAAAGATTATTACTTCATCTTTTCCACGCTACTAATTGCAATTTCCCCATACTTGGGGACTGATTTGAAATCGGTTATCAGGCGGATATCTTTGCAGATGGCATGAATTGCAATTTCCCCATACTTGGGGACTGATTTGAAACTTCCGGCTCGATCGATTGACGGTAGCGCTCCGGTCAAATTGCAATTTCCCCATACTTGGGGACTGATTTGAAACCTCTGTTGCCGGACATTGATTTGTCCGTTTCACAATTGCAATTTCCCCATAGTTGGGGACTGATTTGAAAATTGAATCCGCTGTTCGCAGCCTCATTCTCTCGCTAATTGCAATTTCCCCATAGTTGGGGGCTGATTTGAAAAGTTTGCTGACTACTGTCAGCGACATCGGATGACGATGAAATTGCAATTTCCCCATAGTTGGGGATTAATTGAA # Right flank : TAGTTAAAGTGCTGACTAATCTGGTCATAGATTGTCGGTTAGATCCCCCCTAACCCCCCTTAAAAAGGGGGGAACCGGATTCAAAGTCCCCCTTTGTAAGGGGGATTTAGGGGGATCTAAAACGTCTGGGCTTATAACTAGCAACTTACGTTATGTAGCTTTAGGCTATTCTTAAGGAAGTGAGCAGGGGAAGCGTATTTTGGGAACCGCATTTTTCACGAAGTCAGGGTTTTTTCAATGCGGCGATCGGGAATCAGCCACATAATTGCAACTAAAACATATAATGTGAAAGCCAACCATGAATTAACAAAGGAAAGTGCAATTCCCAAGGCATAAATTACCACTGATATCTTGCCTTTAAAGTCTCGCCCAATTGCTATTGCTAAAGTAGAATCTTTGCCATGATGAGCAATTAGAGTCCGACTCAAAATGTAATAAGCGATCGCAGCACACAAAAGTACAATGCCATAAAAGGCAACTGGGAAAGCGGCAAAATTGTT # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCAACTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : NA //