Array 1 119096-119757 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNEQ010000007.1 Parabacteroides distasonis strain D40t1_170626_B3 NODE_7_length_186042_cov_29.4218, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 119096 47 68.1 29 AAG..T.AG.AT...T...A...........C....CAA.......T CTTGGGGCGAATGGTGACGGTTGGCTTGC A [119107] 119173 47 95.7 30 ...........T...T............................... TCTCCTACCAAGGTGATACCCCTGATCAGC 119250 47 100.0 30 ............................................... TAAGAAATTCAATCATTTCAGTGATAGCAT 119327 47 100.0 29 ............................................... TTTACGAGCTTGACCTAATGCTGATGATT 119403 47 100.0 30 ............................................... AGTCGAACCTACGCAGTGCAAGAGCGCCAC 119480 47 100.0 30 ............................................... ACGCATCTATGTAGGCACTTATGCCAAGTA 119557 47 100.0 30 ............................................... TAATGTTTTTGGGTTTGTATCCTCCACCTC 119634 47 100.0 30 ............................................... CGACAATGGCTGGCAAACCGGCGCGTTGCA 119711 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 9 47 96.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC # Left flank : ACTCGTGGGGGATTCGTCTGGGGTTGTCGTACAAGCAAGTTCAAGAGAATGCGTCGCTTTCCGGAGTGCTCACAGTTAAGCACCTCATTTATCAGCTCATCCTGTTTATCATATAGCCATTCGTTTTCCTTGGTCGAGAAATGGCTACAGACCCATAACGCTTGATAACTAACGGCATCATCCGGATCGAATATCAGATCGTATAGCTCTGCTTTCCGTTCTTGGTTCCCTTGTACATAAAATAATATCTCATGGATATCCTCTATATGACAGCGGCTTGATAGTCTCTCTTTTAGGTCCATTCTCAATCTTTGTTGTTGTCTCTTTATCTTTTCTGCCGTAAAGTTATAGTCTTTTTAGCAAAGTTTCCTTAGTTCGCTTACTTTTGTGCCCCATTGATAAAAGAATGGATAGATATGCGATATATGAATTTATTAAATGATTTAACAATTGATTGTAAAAATAACGGAGGGTGTTACCGAGTAAAGGATCAGTTGAAG # Right flank : CTTAATCTGTATTATATGCTGTATATCAACTAGATGATAGAATGGTTAGAAAATAAAAAAGAAAAGTTTCCAATGTAATAAATCCCGTTTTATGACGGGATTTATTATTTCTAGAAAAGCTCTAATTGTTGGCCGGGTGTATTAGGAGGTTGTACTTTTTTCCCATAGAACAACTCAATATTCCCAAATTGTTTGTCTGTAATGCACATTATTCCTATTTGCCCGTGTTCTGGTAAAAATGATTTTACTCGTTTTATGTGTACTTCTGCATTTTCTTGGCTGGCGCAATGTCGCACATAAATAGAGAACTGAAACATGGTAAAGCCATCACGCTGCAGATTCTTACGGAAATCACTATAAGCTTTCTTTTCTTTTTTTGTTTCCGTAGGCAAGTCAAATAATACCAACACCCACATAATACGATATTCGCTAAATCGATCCATGATTATTACCGTTCTGGATACACGATTCTTCGTTGCTCTCCACTGAAACATTTGTAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.10,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //