Array 1 13340-18150 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGIA01000171.1 Sunxiuqinia dokdonensis strain DH1 contig00171, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 13340 30 100.0 38 .............................. ATTCAAATATTGTTTTGGATTATAACACTTCGCAATTT 13408 30 100.0 34 .............................. GTGCTTTGCCCTTATTGGCTCCGGCTGTAATTCG 13472 30 100.0 36 .............................. TTCTGTCTTAATTCTTCGATGCTTTTCGGCTCTGCT 13538 30 100.0 34 .............................. GTGAACTGAAGCAGGAAGATTTTCAACAGTTAAA 13602 30 100.0 36 .............................. AAATAAAAACCAGCTTTTTCATATTCTGTTTGATCT 13668 30 100.0 37 .............................. ATTGGAGGCAGGAAAGAAGCTTGCACGGGTTATCTCC 13735 30 100.0 37 .............................. GGATGACTCGTTTATTGATGAAATGCGGGAACGCCTG 13802 30 100.0 35 .............................. TTTTTATCCGGCGTGTAGCCTGTTGCGGGGTCTTT 13867 30 100.0 34 .............................. ATGTTCCTGAACTTGTCACGGGAGAACCTGACAC 13931 30 100.0 35 .............................. ACAGCTTTCTCTAACTTTTCACGGATCGCGTCAAT 13996 30 100.0 37 .............................. GATGCAAATGTGAACGCGCCCTGATTGCGATTTCCTT 14063 30 100.0 35 .............................. TTTGTATGGCCTGAAAAATTAAAAAAACAATGGTT 14128 30 100.0 36 .............................. GTAGATACCCTGATCGACGGCGTAGGTCACAACTTT 14194 30 100.0 37 .............................. CGAGTGGAGGCGGTGGGGGTCGAACCCACGTCCAAAC 14261 30 100.0 34 .............................. TCAACAGGCCAGACAGGTGGCAACTCGCGAACCT 14325 30 100.0 36 .............................. CTAGACGGCCGGTTTTCGATTCAGCTTGTTAGCGCT 14391 30 100.0 34 .............................. TTGGTTTTTTATTTACCAATAAAGCATCTTTCTT 14455 30 100.0 35 .............................. CGAAAACAAGCTTACAGACGAAGAAATTTACGCTC 14520 30 100.0 36 .............................. GCGGCATTGCTTCGACTGAAAAAGAGGCAACAGCTA 14586 30 100.0 35 .............................. TTATTACCCTGCTATGTTTGCAAGTGAGGATGCTG 14651 30 100.0 35 .............................. AGTGCTGCAAGTGGTCGGGAGCTTCATGCAACAAA 14716 30 100.0 36 .............................. TTTGAACCATTTCGGATAAACCCCAACCACAAAATC 14782 30 100.0 34 .............................. TACGTTTGCATTGATCAAGCTTTCGTAGTCATTT 14846 30 100.0 35 .............................. TTGAAGCGATCCGTTCAATTTCTTCCGGTTTCAGG 14911 30 100.0 38 .............................. GTAATCCCGGCAGTTGGCGAACCATGCGAATTCAACAA 14979 30 100.0 36 .............................. AAGCAAGGGTTTGATCTGGACATTGGTCTGATCAAT 15045 30 100.0 36 .............................. ATCTTGCCAGCGGAAATTATTTTGCAGCCGCCGCAA 15111 30 100.0 37 .............................. AAATCAAAGCCACCATCAAAGTAAACCCATACTAAAT 15178 30 100.0 36 .............................. TTGTCATTGACGGCGCCTATGCCAACACCGCCGTCG 15244 30 100.0 35 .............................. GAGTTATACAGGTCTGAAACCTCGCTTGATGTAAG 15309 30 100.0 36 .............................. TTGTACAATCAAATGGGATTGACCGTTCTTCCCGGA 15375 30 100.0 34 .............................. TACTTGAATCCTATGTCAAAAGATGAACTGAATT 15439 30 100.0 35 .............................. TTGAAAACAACAATATGCTGCGGGTGATGCGAACA 15504 30 100.0 37 .............................. GTCGTAGCATAATTGTGGGTTATGTTTGAGAATACAC 15571 30 100.0 34 .............................. CACGGATCTGGTCGGTGTTGCCATTGCGGGCCTG 15635 30 100.0 36 .............................. GCAGATGAAATGAATTTAAAAATACAAATTTGTTTA 15701 30 100.0 37 .............................. AGCTATTCAGCGTGGGGAAAAGAAGTTTGAACTTAGA 15768 30 100.0 35 .............................. TGTTGAGGCGGAACAGATATGATCAGCTTCTTAAT 15833 30 100.0 34 .............................. CTACGGAGATTCGCTACCGGGATACGCTGGTTTA 15897 30 100.0 34 .............................. CGCGTAAGTTTCTGGGAAAGATCTTTGATAATTG 15961 30 100.0 36 .............................. TCTGAACCTGATGCTCCTGCTGTTAAACCTCCGCAA 16027 30 100.0 35 .............................. ATGATCAGATCATTAACAAACTTCACGGCCTGACC 16092 30 100.0 37 .............................. TGGATTTCTTAAACTGGAGTGATTCACCTATTCCCAG 16159 30 100.0 36 .............................. GGTTTTCAAAATAGGAAATAAGGTCTAAGAATTTCG 16225 30 100.0 35 .............................. AAATTCCCTTGCGGGTGTATTTTGACCTCGACACC 16290 30 100.0 35 .............................. CGAACGAAAAATGAGTATGAATATGGGCGATCTCG 16355 30 100.0 35 .............................. ATTTTGCGACCGCCTACCTGATGGAAGAAAGCGGG 16420 30 100.0 35 .............................. GAGTAAACACGAAAACCCGAAACCCGAAACTCAAA 16485 30 100.0 36 .............................. AAAAGACATGTCAGACTTATTTTCAATCTCAATCAG 16551 30 100.0 38 .............................. TGAAAATCCGACCGTAAAAATCGGACAGGGTGCGGTAT 16619 30 100.0 35 .............................. TGCTTTACCTTTGCTCAACAATATTCTGAAGTTGT 16684 30 100.0 35 .............................. TTGTGATCCGGTTGCTTTTGAAATGTGGTTGTTTC 16749 30 100.0 37 .............................. AACCTGGAACGAAGAAACCGCCAAAACGGAAGGCATG 16816 30 100.0 35 .............................. GTGCTGTACCTGCATATAATTTTTTAACTCTAAAT 16881 30 100.0 37 .............................. ATGTGAACAGGAACTTCAAAGCGAAAAGTACAGTAGG 16948 30 100.0 35 .............................. GACGTATTTGGATGAGTACAGATGCAGGTGAAAGT 17013 30 100.0 34 .............................. ATACCAGTGAAGAAACTGAAAATTTCACGTTCAA 17077 30 100.0 35 .............................. TTGCTGCACACCAACATGTTTGATGAGCTGCAGGA 17142 30 100.0 34 .............................. TTATTAAAGGATAGAAGGATCATAATGCATGTTG 17206 30 100.0 36 .............................. GTGGATCAATACCAGACTTCATTTGTCCTCTCTTGG 17272 30 100.0 35 .............................. TGGTTAGCGGTTTTTAGCGTTAAGTAGTTTTTGAG 17337 30 100.0 36 .............................. TCGACGAAAAGGCAAAACTTCTGGAGTTTAGGCGCC 17403 30 100.0 36 .............................. TTCGAATGTCGCTGTCCGGATCATCAAAATGGAACA 17469 30 100.0 37 .............................. TACCGAGCAGTACGCCATAGGCAGCGCTGATGTCTTC 17536 30 100.0 34 .............................. CGAAGACCTGACCCATGCCATTTATGGCCGTTGG 17600 30 100.0 36 .............................. AAATAATTAACGCAAAAGAATTTCGTTCCCTGTACA 17666 30 100.0 36 .............................. ACTGATATTACCCGGATTAATTAATGAAGGTTGAAT 17732 30 100.0 35 .............................. TGTTAATTCCCGTTTCGTTTTGAGATTTCCTTTTC 17797 30 100.0 34 .............................. TGTATTTCAGCGGGAAGTTAAACCAGGTGGTTTG 17861 30 100.0 34 .............................. ACGAAACAACGGGCCGCAAAGCGGTGAACCGTGA 17925 30 100.0 35 .............................. GTGCTGGTGTACAGCAGCAACCTAAGCGCCGCCGA 17990 30 100.0 35 .............................. AAGGCATGATGGTTTACATTGAGGGTAAAATCAAA 18055 30 100.0 35 .............................. ACATGATATTCAAGGTTGAAGGATTTAAGGGCTTT 18120 30 93.3 0 ..C.....................G..... | T [18122] ========== ====== ====== ====== ============================== ====================================== ================== 74 30 99.9 35 CCACCAATCGCACCATACTGGAATTGAAAT # Left flank : TGTGGTGGTAATGTACGTCATAGCTGTATACGATGTTAATAAACGCCGGGTGGCCAAAATGCTGAAGCTTTGCCGCCGCTACTTGAACTGGATCCAGAATTCGGTTTTTGAAGGAGAGATTTCGGAAGCAAAACTACTGGAATTCAAGCATGAAGCCATGCTGCTGATGGATGAGGAAACCGATAGTTTAATTATCTTTAAAACCCGCCAGGAGAAATGGCTGGATAAAGAAGTTGTTGGCCATGAGCGCCAAAACCTGGACACTTTTCTGTAGAAAAAGTTGTCGATGGCTTTCCTGAGTAGGCTTTTTCCCATAGAACAGGAAAAAAATGAAGAAAGCCACGTTCTTTGACATACTGAAAATAAGCGATTTATATATACTTGTCGATCCCCCGGGAAAAATACCTTCTGGGGGATCGACAATCTTTTCATTAAAAAATCCGATATTTGAAAAAGTTAATCTATTGAATATGAATTTATTTTTTTGAGTCGTCGAACGG # Right flank : TGCGACAAGTAGGGTTGCCAGTGGTATCCACACGACAGTTTTTGTTTTATCCATTTCTGTAATTTTTGATGATGGAAAAGTGAATATCTTTTCAACCTTAACACCGCATCTTTCAGCGGTGGCAAAATGTTTTGAGGCAATTACAGCTGGTGCGGATTAATGACAACGAGTGATTGAAAAACAGGGCACAAGAAAGCCCGGTACTGCAGTGCAACACCGGGCGGTTGAGTAGAAGTCGGAAATTCGACTTTATCTTGCTCCAAAGTTTTTAAGAATCTGGTTGATATGCTTTGAGTCGATGGATGATACTTCGCTTTTGTCGTAGATGGCAACCAAGTAGATTACGTTATTTTCCGAAGCCAGGATGATTTCCTGATAAGATACTATTCTCATGCCCCCGCTTTTCCCCTTTCCTTTCGACCGTACAGCCAAACGCGCTTTAAAAAGTCCGCCTCCAAGCGCTACCCCTTGAGCTCCTTTGCTTTCAGTTTCAGAAATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCACCAATCGCACCATACTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //