Array 1 7-219 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SPMX01000001.1 Candidatus Accumulibacter phosphatis strain SBR_L PAO6_binned_c1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
         7	    29	 100.0	    32	.............................	GAAACATAAATGCCGTGATCGACACGGTGATT	
        68	    29	 100.0	    32	.............................	GGAGTGCTCTCGGTATCGTTCTTCAACATCTC	
       129	    29	 100.0	    32	.............................	CATCAGCACTCCCAGCCACCATCACCATCAAC	
       190	    29	  89.7	     0	.........AT...............T..	|                               	G [207]
==========	======	======	======	=============================	================================	==================
         4	    29	  97.4	    32	GTGTTCCCCGCAGGCGCGGGGATGAACCG	                                	       

# Left flank :   GGCAGGG
# Right flank :  GGTTTCGGGCCTAGATGATTCCTGTGGAAGCAGGATCGATATTTCACTGCTAATCGTTGTTTTCAGGTTTAATCATGGTCCCGGAAAGTGAAGCCTGGCCCTTGCCACCAGTCGAGTCCGCAGGCGCCGGTGTCATCCGTTTGTCCTCTACGGCCAATGACGTGTAAATCAGCATTTGCTCGACCAAATTTTTTCGACCACAAAGGAGTGTTACATGGCAATCAGTCTGCAGAAAGGCGGTAACGTCAATCTTAGCAAGGAAGCCCCGTCCCTCAAGAGGATGATCATCGGCCTCGGGTGGAATGCCCGGGCGACCGATGGCGCGGCCTTCGACCTGGACAGCAGCGCATTCATCCTCAAGAGCGACGGCAAGGTTCGCAACGACGCCGATTTCATTTTCTACAACAACCTCAAGTCATCCTGCGGTTCGGTCGTTCACAACGGCGACAACCTGACCGGCATTGGCGAGGGGGATGACGAAACGCTGACGATCGAACTCG

# Questionable array : NO	 Score: 5.73
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCAGGCGCGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [1.7-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//


Array 1 55001-55158 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SPMX01000041.1 Candidatus Accumulibacter phosphatis strain SBR_L PAO6_binned_c41, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	=====================================	==================================	==================
     55001	    37	 100.0	    34	.....................................	CGTAACTGGAGAACGAAAGCCCAGCGACAGCCGG	
     55072	    37	 100.0	    33	.....................................	TACAAATAGAAGCTAAGAGTTCTTAGCTTCTTA 	
     55142	    17	  45.9	     0	.................--------------------	|                                 	
==========	======	======	======	=====================================	==================================	==================
         3	    37	  82.0	    34	GTCTCAATCCCTTTGATTTCAGGGCTGGTTACTGACG	                                  	       

# Left flank :   AATCTTTGGTGATTCGCACGGAGTAAACGGGGAGACTCGAATGGACCCTCTTGAAATTCAAACTTGGATACCACGGATCGTCACGAAATAATGTATAGGCTTCCTTGGCTTTAGCTTGAATGTCTCGTGGCAACACTCGAAAGCATTTCAAAAACTTTGGAGTGGCTCTTGATATCACAGCTTGTTCGGATCTAGTTCTGTTGTCTTGCCTTGATCTTCTTCCCGCAAAGCTTCGGCGGCCAACTGAGCCAAGATGTCTTCCGACTCAGAAAAAAAGCTCATCCCACCTCTTTTCCGATTTGATCTCGTCAAGAATCATCCGGGCAAGAATGTTTTGCTCCAAAGTCGGGAGCTTTGAGGCAATCTCAAAGGCTTTCTCAAGCAAGCTAGTCATGGTACTTTTCGTCTCCTATTTCACATCTATATGTTGAAAGAAGAAGAAAAGGGATCTGACCCTCATGGCGCTCGTTGGCGACAACGAACTGGAGTTCTGGTGCGAA
# Right flank :  |

# Questionable array : NO	 Score: 4.46
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.10, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAATCCCTTTGATTTCAGGGCTGGTTACTGACG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:51.35%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-3.80,-6.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [45.0-0.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.68,0.37   Confidence: LOW] 

# Array family : NA
//