Array 1 7503-7232 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANA010000019.1 Vibrio metschnikovii strain M14Y Scaffold19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7502 28 89.3 32 ..G.G.G..................... GTAGCGATAATCCGGCGCTCGTTGAACCTAAC TC,A [7490,7495] 7439 28 100.0 32 ............................ GAGAACGTGGGGGATTATCTCTAGCGTGACGC 7379 28 100.0 32 ............................ TTTTCGCGCTCGCCCTCTTCCGCTTTGCGCCT 7319 28 100.0 32 ............................ ACAACATGCAACGGTCATTTTGAAAAGCTTTT 7259 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 96.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTTATCAAGTTAGTCGAGATGAAAGGCACTTTGAAAAGACGGCAGTTAAAATGCGCATTGAACACGGAGTTCCGTGAGCGAGTTTTATTTGGTAATTAACATTTTGTTAACT # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGCACTTTCTTGAGTTTTGTATAATAAATAGATAGGAAAAAATATGTCAGTTTTAGGTATTAGCTTAGAGAGAAATGGATTGAGGTATGCAGTGCTTGATGGAACGAAAGCGGTTCCAAGCCTTATTGGTTTTGAGAACGTACAAACCAATAATTTTACTAGCATACAACAACTAATGAATTGGTATGAAACTACTTTTCAAAACCTGCTTTCTCGCTACTCACCCACATCTATTGGTATTAAAGTTTCATTAAATGCGAAAAAAGATCAGATATCCCCTTGGTACTATCCTCTTGGACTCCTTCATAATATGGCATACCAAAATAATATTGGTACATTTGAGTTTGT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1334-766 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANA010000064.1 Vibrio metschnikovii strain M14Y Scaffold64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1333 28 100.0 32 ............................ AGAAGCCACAGCAGCTTCAATAGCTTCAGAAT 1273 28 100.0 32 ............................ ACAATGACCGAGCGATACAAAGATTCGGCAGG 1213 28 100.0 32 ............................ AGCAATCAAAAACACCGCCACAAATGCAATTA 1153 28 100.0 32 ............................ ACTTAGCTTCCTGCCGTGCTGGTCGTGGACTA 1093 28 100.0 32 ............................ CTTCTCAAATCTCACAAACTCAATAATAGAAC 1033 28 100.0 32 ............................ AAATTATGTTACGGGCTTCGCTAGCAAAGCGA 973 28 100.0 32 ............................ TAGATTGTGTAGGCGTGCCAAGTGGGTTTTAC 913 28 100.0 32 ............................ TTAGCTTTCGATTTAGCGTGGTATGCGTAGCT 853 28 100.0 32 ............................ CCGAAATTAAAAAGCATTTCGAAGCGTCTTTT 793 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.3 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TAAAGCATAACAAACACTTCAAGAGGGACTTCCAACGCGTAGCATTTTCATTATGCGTTGATTTCGGTGGTTTCAGTGTTGTGCGGAAACTTGGTAGTAGCGTTGTCAGCCCCTTAAGTGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCAT # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGGTGTTTTCATGTTTAGATCCTTAAGTTGATGAAACAGATGATAAGATTTATTTTGAATTACTTTTTTGGCCTATTTATACCGACTCGTAGACAATTAAACGTAATTGCAAGTGTGTCTGAGTCTTTGGAAAATGAAAGTTCAAAATTAGTTGTTCGGCAGAAAAAGGAACTCGACTTTATAGAGCGGCATGATCTATTAAAGTTGAAAGTCGATCTGAAGTATGCAAGAGAACGTGCTGTAGATTTTGGTATTAGCCAAAAGGATTTGGAAATAGAATTATCTAAGATTAAGAGAGAGTATTTTTTATCTCATAATAAGCATCTTGAAAAATATTTAAAAAAACAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //