Array 1 1506470-1508759 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXRK010000001.1 Citrobacter sp. RHBSTW-00104 RHBSTW-00104_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1506470 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 1506531 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 1506592 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 1506653 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 1506714 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 1506775 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 1506836 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 1506897 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 1506958 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 1507019 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 1507080 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 1507141 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 1507202 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 1507263 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 1507325 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 1507386 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 1507447 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 1507508 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 1507569 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 1507630 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 1507691 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 1507752 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 1507813 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 1507874 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 1507935 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 1507996 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 1508057 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 1508118 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 1508180 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 1508241 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 1508302 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 1508363 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 1508424 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 1508485 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 1508548 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 1508609 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 1508670 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 1508731 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //