Array 1 1927-2917 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBEF01000001.1 Serratia microhaemolytica strain ZS-11 Scaffold1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1927 28 100.0 32 ............................ TGCAGTTCACCACATGAGCATCTGATATTCCA 1987 28 100.0 32 ............................ TTCATACTCAACCGCTTCAGCCGAGGCATGAG 2047 28 100.0 32 ............................ AGGCTGGCATCAAGCGTTGCACCGTCGGCAAG 2107 28 100.0 33 ............................ TCATGCATCTCTACCGCTCTTGCGAAGAACGGA 2168 28 100.0 32 ............................ GATAAGTTACTAAAGCTGGCCGCCAAGCGTGG 2228 28 100.0 32 ............................ TTTAGCGGCATACGCGCAGTAGGTCACGAAGT 2288 28 100.0 32 ............................ TATCGGTTTGATGTGACGCCGCCAGAATACCC 2348 28 100.0 32 ............................ TATCAGGTCAATAGCCAAATCCTCATTGCTAT 2408 28 100.0 32 ............................ TCTAAGTTGATGGTCTTTAGTGAGAACAGGCC 2468 28 100.0 32 ............................ TGTGGTGCGGTGACTGGGCGGGCTACTCACAA 2528 28 100.0 32 ............................ TTTAACTAATTGATTTTGTCATTAAACGGTTT 2588 28 100.0 32 ............................ TTACCCAGCTCTGGATAATCGCGCATTAGCGT 2648 28 100.0 32 ............................ AGCTAAGATGGCTTGCACCATCTCAGAGTTGA 2708 28 100.0 32 ............................ GCTGTTATTCTCTTCATGTATTGTTGATAATG 2768 28 100.0 32 ............................ GGCAGTCACATAGCTAACCGACGGTGCCAATG 2828 28 100.0 32 ............................ AATAGATAGCGGTCATAACGGATCACCTCTGG 2888 28 82.1 0 ................TTC...A.C... | T,C [2902,2915] ========== ====== ====== ====== ============================ ================================= ================== 17 28 98.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TATAACCGGGATAACACTGTGCGGTGGCAATGCTGGCCGCACGGTGGTTTTAAGGAGGCCGAGATAACCGCAAAGACGTGGCTGCGGGTGATCCTTATGGCACCAGCAGCACCGCCGCCATGTTATTTATGGAAAATGGTGACAATGCAATCACTCTAGCAGTGGCGGTAGTTAACTGGTTTAAACTCCAGGGCAACATCACGAACATTTTTCACACCACCGATGAAAGCCTATCTCGATTTACTGAGCAGTTCGACGGGGCAAAGGTAGCGTAACTTGTTTGTTTTTGGCCAAATGCAGCAGGCAGCGGTGAGTGAAACGTTTGATGCGTCTGGTTTGAGTCACACGGCGACGGTTGCTTGGTTTTGACCCTTTATTTTTGCGCTTTAAAAATATTGATTAAATACAAATGGTTGCAATAGGTGATTTTTAATAGGGTAAAAAGACGATTTTTATCCTAGCTACCTGTTGTAACTTATTTTTATTGGTTTATTCTATCG # Right flank : AGGAGTGGATATGAAATACAATGCTTTGTTTTATAAAATTTAATTCAAATCGATTAGCAACCGTAAGAACCATTGGTTAAAATGGTGGCACCTTGCAGCGCTGTGCAATAAAATTGCTTTTTTTAATGAGATAAATAACAAAAAGGAATTAATATGTTAAACAACAACGTGATAGTTAAAGGCGATATCACTTCTCACGGTGGTGAAGTATTGGAAGGATGTGACGATATCCAGGTGGAAGGAATACCGGTGGCATTGATCGGGCATCGTGTTTCTTGCCCGCGCTGTGAAGGCACTTTCCTGATTGAAGCCGGCGGCGCCACGCTACAAGTCAATGGTCGGCCTGTCGCGCTGGAAGGAATGCACACTAGCTGCGGTGCTCAGTTGCTCGCTAGAAAAAAAAGCCTGAATGCACGCAGCTAATCAGGGTTGATAGCCATTATTTGTGGTTTGATTCGTCAAGCTAACTCGAACTACAGCGTTCATCGTAGCAATCCCCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 765-1633 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBEF01000005.1 Serratia microhaemolytica strain ZS-11 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 765 28 100.0 32 ............................ GGGATATATATAATGCGGCCACGTCTTTATCC 825 28 100.0 32 ............................ CGCGTGAGCGCGGCACTTCGCTTCTCCCTTGT 885 28 100.0 32 ............................ TCATCTTCGCATCCATCGAAGCCCATTTTAAC 945 28 100.0 32 ............................ AACTGGTTGCCAGCGGCAAAAGCCAAACCATG 1005 28 100.0 32 ............................ CAGTAACATGATTCGGCTGCCTTCTCCGAATC 1065 28 100.0 32 ............................ GTAATCCATACGGGACTCTGTAGGCTTGTGCC 1125 28 100.0 32 ............................ ACAAATTAATGTGATTACGTGCTTGAGTTAAT 1185 28 100.0 32 ............................ TTTATAGTGCGCGTCAATTGATGCTTGCAGCC 1245 28 100.0 33 ............................ GCTGCAGCGGTGAATTCAGAAAGTTCTTTTGGA 1306 28 100.0 32 ............................ GCGTGAAGCGCTTTCTTGATTTCTGATAATAT 1366 28 100.0 32 ............................ TTTTTGGCAATGCGGTTGTCATGGGCGTTGAT 1426 28 100.0 32 ............................ TGAAAATGAAGCCAAAACTCATCAGCGGCAAT 1486 28 100.0 32 ............................ GCAAGGTATCAACCTCGCATGTGATGTGAGCT 1546 28 100.0 32 ............................ GCACTGTCCTGCTCGACGTTGATACCCGTGAT 1606 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 15 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGCTGCTAAGCTCCTCTGTTTAAAAGCATTTGATTATTTTGCAATAACCCCCTCCCAACCGCACCCGTCGCAGCGGGCGGAACTGGACAATGCTGTTGTTTTGATGAGGTGAAGCAGGTAAACGCGCGAACAGGTCAAATACTGTTGTTGGTTGAAAAATGTTGGTGATCTTGCCCTGAGCTGAACAGCGATACACAGCTAAGATACGCAGCCAGCGTGTTGACATCCGTTATCGCGATTGACTGAGCAGCTCGACAGGGCAAAGGTAGCGTAACTTCTTTCTTTTTGGCCAAATGCAACAAACAGCGGTGAGTGAAACGTTTGCTGGGTATGGCTTGAATCACACAGCGACGGTTGCTTGGGTTTGACCCTTTATTTTTGCGCTTTAAAAACGTTGTTTAAATACAAAAGGTTACAACAGGTGGTTTTTAATAGGGTAAAAAGACGATTTTTATCCTAGCTAGCTGTTGTAACTTATTTTTATTGGTTTATTCTATCG # Right flank : ACGTCGGCAAGCAAAATGCTGCGCGGTGGGTATGCTCTTGTCCCTCACCACCGCACAGGCACGCTAACCATTTGCCGTTAACTGAGCCAGTAGGCGAGCGGTTTGTTCTGGTACGTTGCCGGTGATTGCTGCGGAGATCACCGCGATGCCGTTCACACCTTGTGCCATCACTTGTGCTAGGTTTTCATGGTTAATGCCGCCAATCGCGACGGATGGTAATTGGGTTGCATTGGCTAACAGGTTAAGCGTTGTCAGTCCGATAACCTCGATATCCTGTTTTGAAGCGGTAGCGAATACCGCGCCAAAACCGAGGTAATCAGCACCGGCTTCGGCGGCTTGTTGTGCTTCGTCAACACTCCCGGCGGAGGCACCAATAATAAACGGGCGCTTTGCCAGGTTTCGCGCTTGATTGATCGGTAAGTCACTCTGCCCTAAGTGAACGCCATCCGCGCCACAGGCCAAGGCAATATCAAGCCGGTCGTTAACCAAAAAAAGTGCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 119121-120063 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBEF01000004.1 Serratia microhaemolytica strain ZS-11 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 119121 28 100.0 33 ............................ TAAAGGGCGGGGAGGTGCAGGGGATCGGGCGCT 119182 28 100.0 33 ............................ TAATGCAAGAATTGCAGTAACTGGTCATTTACA 119243 28 100.0 33 ............................ TTTACAGCCCGCAAGCGACAAAGAGATTGATTT 119304 28 100.0 33 ............................ TATGTTGATTATACGGACTTGTCCAGCGATCTA 119365 28 100.0 33 ............................ CCCATAGTGTCATCAGCATCTGATGACACGGTT 119426 28 100.0 33 ............................ CTAAAAAGAAGGAGCCAAATTATATACACCTTT 119487 28 100.0 33 ............................ TGCCCCAGCCGTGACATACATCCACGGTTTCGG 119548 28 100.0 33 ............................ CTCATAGCCCACTTTATACTTTGAGCCGAATGG 119609 28 100.0 33 ............................ CCAGACACGACGACCGATCACATAGATAAACCC 119670 28 100.0 33 ............................ TTAGGGACAACAACAGCACAGCTTGCACGCATG 119731 28 100.0 33 ............................ CCGGTAAAGGAGTACTGGAAACGGCAGAAGCGG 119792 28 100.0 33 ............................ CCGCTAATCGGCGCACTTACTTACGAGTTGGCC 119853 28 100.0 33 ............................ TGAGTTCAGTTTTTTGGGTGCGGGTGTGGTAAC 119914 28 100.0 33 ............................ CACACCGATTTGTATTTGAGCACGTTGTAAAAT 119975 28 100.0 33 ............................ TCAAGAAATTTACGGTTTGCCGGGTTATCTCTC 120036 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 16 28 100.0 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : GAAGCACTTTGTATCGATTTGGCTTTCTCATTAACCAAAGAGATGGCCGGGCGTTATAACAAAGAGTTGCTTTCGACACGTTTCAGACAACGCGTAATCAGCTTGGATTTGCTGGCGCGGATTGGCAGGGATATTCCGCAACTATTGGGAGAAAAAAATGCTGATTGTGTTGGCGAATGATCTACCGCCGGCAGTGCGTGGCAGGATGAAATTATGGTTTATCGAACCAAAGCCAAATGTCTTTGTTTCTGGTCTGAAAGATTCAGTAGCAAACACGGTGGTAGATTATCTTTACCAGCACTGTACACCGGCGGCTGGGATAATGATTTTCAAAAGTATTAAACAGCCACCTGGCTATGAAATACGCACGATTGGTACACCGGATAAAGGTTTGATTGAGCTGACAGGCTTACAGTTGATTGTCGAGAAAAACATAGCAGACTAACAGGCCTCACCACCCTATATAGGTTGTTGGGGGTGCTCTTTTACAATATATTGGT # Right flank : CCACCCATCAGGATTTTTCCGATGCTTAGAAAAGGGCTTCCCCACACCCACCCACCAAGCATAACCAAATCTAAATCAGTTCATCGTACCCGCTATTTTTACTTGTTGTTACTTTTTGAAAAATAATCTATTTTCTTTTTTTTGTGATCTCGATCACATGGAATAGTAAAATAAAATTGTACAATCTCGCGGTCAAATAAACACCATGGATCAGGTTGCGGTGAGTCTATGGTGCGCACACCGCGCAGACTGATTACAAGGAATTACGCATGGAAGATCTTCATCCATCAGATTTGAAAACTATTCTTCATTCTAACAGAGCCAATCTTTATTACCTTGAATACTGCCGTCTATTGGTCAATGGCGGTCGGGTTGAGTACGTGACCGACGAAGGTAAAGAATCGCTTTATTGGAACATTCCCATCGCAAATACCACCTGTCTATTATTAGGTACTGGCACCTCAATAACCCAAGCAGCAATGCGTGAACTCGCCAAAGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 128570-129019 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBEF01000004.1 Serratia microhaemolytica strain ZS-11 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 128570 28 100.0 32 ............................ ACATTACCAGCGGCTCCAGATGCAGCACCTGC 128630 28 100.0 32 ............................ TTGCTGACCACCACTCTACATAGCGCTCAGCA 128690 28 100.0 32 ............................ ACTTCTAAACTGATAGTTTTTAATGAAAATTC 128750 28 100.0 33 ............................ GCAGATTTACACGCCGAGCGGGGAGCCAGAAAA 128811 28 100.0 32 ............................ TTGACGCATTCTTCGCAATCCCCTCGGCACAT 128871 28 100.0 32 ............................ GGGGAGTGATACCACTGAAGCCGCCGATCCCA 128931 28 100.0 32 ............................ TCTAGCGATAATCCGAATGATTGATTTTTCCA 128991 28 92.9 0 ....................T.C..... | T [129015] ========== ====== ====== ====== ============================ ================================= ================== 8 28 99.1 32 CCTCGCTGCCGCACAGGCAGCTTAGAAA # Left flank : AGCGTGATTTACAGCCACTGATGGCGGGTGAGTGGTTACAAGGAATGCGTGACTATATCCGCATCAGCCCAGTCACCCCGATACCGGACAAAGTACGCTACCGCACCGTGCGGCGCGTACAGTCGAAAAGTGCCCACAACAAGCGCCGTCGTTCGGTAGCTAAAGGCTGGTTAACCGAGGAGCAAGCGCTAATCCGTATTCCGGATACACAGCAGCAAGAGATCAAACTGCCATACAGTGAAATGTATAGCCTCTCCACCGGCAACCGGATGCGACTCTACATTCAGCACGGTGCCTTAGTGGATACAGCAGTCACTGGAGAGTTTAATGCTTACGGGCTAAGTCACTCAGCAACGATCCCGTGGTTTTAACCCTTTTTTTTCGCCCTTTTATAATGCATTGATTTTAAATGTTTATATTGGGGCGAGAGAAATAAGGGTTAGCAGCAGGTTTGGCAACAAGTTCTTTAATAATCTGGATAGTAGTGATAGGATGCAACG # Right flank : ACACATGAAACAATCTTATTGATTGTGTTATCCTGCGTTTGTTTTTTAATCCATCGATATATTGAGTTTCTCCATCAACCCCGTTCAGGAACGACGGTATAAGGCTGCCTAAAGGAGATGAATTCTCACCTTTGGTTTTTAATCCAGCAAAATGGAATCATGCAATGCGAAGACAAAATACAGCGATTGATCTGCAAAGTTTGCAAGAAAAACTTAATGGTTCAAATAGTGAGGCGAGCGGCAAATGGGAACGCTATTCATGTGAATTGGTCACCCCAATGTATGGCGGTGGCGTCATCGCTGGCCAAGTTGATCCACAGATGCCGATCCGCGCCAGTGCCATCCGTGGGCAGTTACGTTTTTGGTGGCGGATTGCTAATGGTCCGTTTGCTGATTCTGAAGAGATGCGCAGATCTGGAGAGATGTGCAGATCTGAAGGGAAGTGCAGATCTGAAGAGAAGTGCAGATCTGAAGAGAAGTGCAGATCTGAAGATATGCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 137191-137878 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBEF01000004.1 Serratia microhaemolytica strain ZS-11 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 137191 28 100.0 32 ............................ GGTATTGAAACGAATTACTCTTGTAATCCGCC 137251 28 100.0 32 ............................ TTTAAGCTGATGGCGTATTTCTCATCAACGAA 137311 28 100.0 32 ............................ CGTAGCGATGCCAACAATGTACGAATCCGACT 137371 28 100.0 32 ............................ TCGAGACCGTTTGACTCGAGGACCGATGACAA 137431 28 100.0 32 ............................ AGCAAGGTAACCCTCTGCCGCATCCAGTGCGG 137491 28 100.0 32 ............................ GATCCCTGGCTGCCCGGAGTTCATCAAGCTCC 137551 28 100.0 32 ............................ CAAAGGAAGAAGCGCACAGGATAGTGTGTTAT 137611 28 100.0 32 ............................ ACGAGATACGGAACGAGTCTGGAACGAGTCAG 137671 28 100.0 32 ............................ TGACTCGCAACGACTCTCCCCTGACTCGCAAC 137731 28 100.0 32 ............................ GCCAAACGGCACGCGCGTACTAAGTTGTCCGT 137791 28 100.0 32 ............................ TTGCCGCTACCTTGCCAGGTTTCCAACAGTTA 137851 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGTTGTGACATGTACCAATGAAGAGATTAAGCAGTTTATTGTTGAAGAGCAGAAAGCTGAGTCATAAAGGATTAACTATGGATTCATACATCGACATACGCTTGCTGCCAGATGCAGCAATAAATGAAGCCGAATTAAGCAGCAGAGTGCTTACCCAGCTTCGCAGATTAGTAAGTTTGTCTTGTGTCACAACGAAGGCGCTAGCCAGTTCCCTCCCCTTGATAAGGGGAGGGGTAGGGTGGGGTTTTAAAGCATTTGATTATTTTGCAATAACCCCATCCCAACCGCCACCGTCGCAGTGGGCGGAGCTAGTGTGAAACGTTTGCTGGGTATGGCTTGAATCACACAGCGACGGTTGCTTGGTTTTGACCCTTTATTTTTGCGATTTAAAAACGTTGTTTAAATACAAAAGGTTACAATAGGTGGTTTTTAATAGGGTAAAAAGACGATTTTTATCCTAGCTACCTGTTGTAACTTATTTTTATTGGTTTATTCTAACG # Right flank : AAAGGTGCCGTGCCTGCTTTCAGTTGTTCAATCGTTCACTGCCGTACAGCCACCACTGCACGTGGCAGAGGCATCACATTAGCCACAGTGATACTTCTGTCACGGCTTGCCACAATAGCATCATTGGCATTAATGTTAATGATTTGCCTTTTTAACAGTAAATTAATTATATAGTTAAATAAAAATCAGTAAGTTCATTCTTTAAGTTATGCCAGTAACTGGCGGCTTTCGCCTGGCTACCAGGTTAATAAAGGCTGATAAAACAATCAGTCATAAATAACGCTAAACAGCATGTCGTGAAAAGAGTATGCATAAACACAAAAAGATACATTTCTTCTTATAAACAATAAGTAACAATTGACATTGTGACGAGAAAATAACAGCATAGCGAGCAATAAATAACACCCTGGAACGGGTGACTTTTTTAGCTATTGATTGTGACTGCACATCACCAACGGAAACACGCTGCCAGGCAGGCGGCCGACAGGGAGACAAGGGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //