Array 1 97975-106991 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGVY010000005.1 Cryomorpha ignava strain QSSC 1-22 Cignava_QSSC1_22_contig005_length, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 97975 37 100.0 35 ..................................... TTTCTTCACGATAAAAAGACATGACGGCTTTCATT 98047 37 100.0 35 ..................................... ATAAGCTAAACAACATGATCACAAAAATTTACAAT 98119 37 100.0 37 ..................................... ACGCGCAAGGAACGCCAACGGGTGAAACGGCGGATAT 98193 37 100.0 36 ..................................... GTTTTCCTTTGTTTGGCATGTCAATTGGCCTTGTTC 98266 37 100.0 36 ..................................... TATCAGACAGACAAAGCGGCGGTTGATTCACAAGTT 98339 37 100.0 36 ..................................... GAGAGTAATCCACTTGCAAGGCTGGCTATAAGGCTG 98412 37 100.0 35 ..................................... AAATCGTCTATAAAAAGGCCACCTTTCAAGAAACC 98484 37 100.0 36 ..................................... ACAACATCCGGTTTCGCATGACGAATACCGGTAGTG 98557 37 100.0 36 ..................................... AAAAGAATGGTCAGGAGATTAACGATAAGACGGCTT 98630 37 100.0 36 ..................................... TTGAGTCATGTGATGAGGCGATTATGGATCAGCTTA 98703 37 100.0 36 ..................................... TGGTGACTAACGGATACGCTATTCAGCAGCAGGAAA 98776 37 100.0 36 ..................................... AAGTCTAAAATAAATCAGTAATGAAAAAAGCTAGAG 98849 37 100.0 35 ..................................... TGAATCCTTCCTGATCTGCTATGAAGGCATTGTTT 98921 37 100.0 36 ..................................... CAGCAGAAGATGAGATGCTTATAAAACGAGACTACT 98994 37 100.0 37 ..................................... ATTTCTACGGGCGACAAAGAAGTCTCGCAACCGTGTT 99068 37 100.0 37 ..................................... TGATGGTTTGATTAATTTGTGTCACCACATTAGTGTA 99142 37 100.0 36 ..................................... CGTTGCTTCCAAGGCCGCCTGTTGTGTCACGGATGC 99215 37 100.0 36 ..................................... AACCAGCAGCCTCCGGCGTTGTTGACGGAGCCGAAA 99288 37 100.0 35 ..................................... TTATATCCTTTGATTGATTCACGTGTTGGGTATTT 99360 37 100.0 36 ..................................... TTTATTCTTTTGTTTTTTGGTGCTTTCATTTGATTT 99433 37 100.0 36 ..................................... CAACAACAAGGTTATGTTTCAAAGGAAATTTTTGAA 99506 37 100.0 37 ..................................... CAAGTCATAACCAACCAGCAACGGTGCATAGTCATTT 99580 37 100.0 38 ..................................... TTGATTCCATTGATGCAAGATCCGTTGGTTGTTGATCC 99655 37 100.0 37 ..................................... CGGAAGCCATCGCTCCAAAAGGGGCGGAGCTGTTTAG 99729 37 100.0 36 ..................................... AACTAAAAAAATGATGTACAAAGGATTCTACGATGT 99802 37 100.0 35 ..................................... CCGGCTTCAATTAGTGCGTCCTGTCTTTCCTTAGC 99874 37 100.0 37 ..................................... CCGTTCCTGTGGCGTTTGCTGCATTGTAACACTCTCT 99948 37 100.0 36 ..................................... ATTTCTACGGGCGACAAAGAAGTCTCGCAACCGTGT 100021 37 100.0 35 ..................................... ATCTAAGCTCCGCAATTTTGCTTTCAGCTCTCGCT 100093 37 100.0 36 ..................................... TTATAACGGGTTAAGAGGGACTGCGTTTTCATACTA 100166 37 100.0 37 ..................................... TTTCCTCCTGTCTCATAGTCATCTTTTTCCCAACAAG 100240 37 100.0 36 ..................................... CATATCCAGAATCGGCTTCGCTATTACCAGATTTTG 100313 37 100.0 36 ..................................... CTCCAGCCTCTCCAGACTTAAACGCTTCTGGATTCG 100386 37 100.0 36 ..................................... CACCATCGTAAAGAATGGCTGTGAAGTCTATTTGGA 100459 37 100.0 38 ..................................... GTGCTTGTATTTCTTTTAGTTGCATTAATTCCAGTACT 100534 37 100.0 34 ..................................... TACCACTATTGCCGATTGGAATGCTTACTACACT 100605 37 100.0 35 ..................................... CGATTAAAGTCCAGTTTGAAAGCTCCGGATCGTAT 100677 37 100.0 37 ..................................... CTACCGTAGAGGTATTCGGTATCTGGGGCCAATAGAG 100751 37 100.0 38 ..................................... TAATTAAAAAAAATGGAATAAACGTACAGGAATATACG 100826 37 100.0 38 ..................................... TTCACGGTACTACTATTAATGTGGGACAGCTGCGCCGG 100901 37 100.0 36 ..................................... ACGCCGAGCTTCAGTTTTTTGTACCTGGCTTAAATG 100974 37 100.0 36 ..................................... GCTCCATTAGTGGGCTTTCTTCTTCGTAGGTAAGCG 101047 37 100.0 36 ..................................... GTCCAAAGAGCGATTAGTCCCTCGTTAGAGTATCCT 101120 37 100.0 36 ..................................... CTTCTTGGATGGTCATATTATTAAGCTCCATAATAT 101193 37 100.0 35 ..................................... AAGCCACGTCACCGAGTAAAGGTGACTCTAAACTA 101265 37 100.0 36 ..................................... CAAGATAATGCGGGTCGATTGACTCCTGTAATAACA 101338 37 100.0 35 ..................................... CTAATGCTGCTCACCCTTATCGCGATAATGCTATT 101410 37 100.0 35 ..................................... ATCTTACTGTTTGTTCATACATAACGCTATGTTTT 101482 37 100.0 36 ..................................... AAGCTGAATATACGCGACTTTTTTACGCTGACAATG 101555 37 100.0 36 ..................................... CTGATGATGCAGCTTTGCCGTATAACCCGAGAGGGT 101628 37 100.0 36 ..................................... TCAATACATTTGGCAATTTTAAGCTGTGTAGCATTT 101701 37 100.0 36 ..................................... TTATTATCTGATTGTGCGCTATGGCGTTGAAGTCGG 101774 37 100.0 36 ..................................... ATATCCGTTAAATCTATATTACACTTTCTGAAGTGC 101847 37 100.0 37 ..................................... TGGTTCGAGATCTTGGGCTTTATGGCGATACCACGAA 101921 37 100.0 36 ..................................... TTTCGGCGATTTGATAGAATGATCCTGCATAGAATA 101994 37 100.0 36 ..................................... TATATGTGGGGCGCACAGAAATCTTCCCTATTACCA 102067 37 100.0 36 ..................................... ATGTTAGATATTTCGCTATCGTTGCTGATTGAATAT 102140 37 100.0 36 ..................................... CGGTGATAGGTCTGCCAATATGGTCGCGAATAACTT 102213 37 100.0 36 ..................................... TCCCGATGAACTTGAAAACAGCTGGTTGATGTTCTT 102286 37 100.0 35 ..................................... TTATCTGTGTTCATAATTCAAAGTTTTTGTGTTAT 102358 37 100.0 37 ..................................... AAAAACGCGCATATAAAGCAGCGCATACCAATGAAAA 102432 37 100.0 36 ..................................... TATTCAGCATCATCAAACCCAAATTTATTAAGCCAG 102505 37 100.0 36 ..................................... CAGAATTACGCAAATGAAGGTGATAAAATATTAGAT 102578 37 100.0 36 ..................................... CCTACATAGCACAGCGCAGCCACCTGCCAGAGCGAT 102651 37 100.0 36 ..................................... ATGTTATGGGTTAATCTTTTAATCATGTGGGAATTT 102724 37 100.0 36 ..................................... GGGCAATCGCTAATTACATAAGACCGCACACAGCCA 102797 37 100.0 36 ..................................... TAGATAAAAATGGAGCTAAAGCACAGGCCGTATTGG 102870 37 100.0 36 ..................................... CACTCAATCACGACTAATGAATGAGTATTTACAAGT 102943 37 100.0 36 ..................................... AAGAAGAAAAAATATGAGCAATCGTGTCCACGCTCC 103016 37 100.0 35 ..................................... GCTATTCAAACTCATTGCCGGTAATTCCGTTTAAA 103088 37 100.0 36 ..................................... TTAAAAACGATCTGCTCCATTATACACCGGTTAAAA 103161 37 100.0 35 ..................................... ATTACTCTATACAAACGATAATAGAATAGAAAAAT 103233 37 100.0 37 ..................................... TGCTTCTATACTTGAAGAATGTTAGAGATAGTAAACA 103307 37 100.0 39 ..................................... AAGCATTTGTTTTTGTTGCCAACTCTTGTGCTTCAACAA 103383 37 100.0 35 ..................................... GTGCAATCAAGTCGGGTGGCAGCTTCTCATCATCT 103455 37 100.0 37 ..................................... TTCTGATGTGTTTATACACCCTTCCTTCGTTGTCTGT 103529 37 100.0 35 ..................................... ACCTCTTTTAAAAAGGCTTTCATATCTTCCTCGCT 103601 37 100.0 36 ..................................... GAATAGATTATTGTAAAGGCTTTGGCCAATAGCATT 103674 37 100.0 38 ..................................... TTAAACATGCTACTGAGTAAAGACGATATTCCGAAAAG 103749 37 100.0 36 ..................................... TGGGATTTGTCATCCGCTCAATACTTGGACGAATTA 103822 37 100.0 36 ..................................... AGAGCACACCTACTCTTTTGGAGATTAAAGAAAATT 103895 37 100.0 36 ..................................... GTGTTTGGTGTTTGGAAAGCGCTTATCTAATAACCA 103968 37 100.0 36 ..................................... TTTCGGGGGTTTTTAGTTTAATGGGTACGATAAGCG 104041 37 100.0 37 ..................................... TTATGCTGTAGCCACCATTATCAATGAGGGCTCGTGA 104115 37 100.0 36 ..................................... ACCTTTTAATTCATTCACTTAATATTGAAAAAAATG 104188 37 100.0 37 ..................................... AATTAATTGGTGTAAACAAAAAAGAATACGGGGTGGT 104262 37 100.0 36 ..................................... TAGGTGTAAATGCCCTTTCGGCGAATGGTGATTTTT 104335 37 100.0 36 ..................................... CCAAAGAAGACATTCGTTCTGGTTGCACAAACAGAA 104408 37 100.0 35 ..................................... AAATAAGACTCACCTTAGAAGCCTACAAAGTAGAA 104480 37 100.0 35 ..................................... TCACATCAAAGTAGCCTTCTACCAGGTACACTTCT 104552 37 100.0 36 ..................................... GAGCTATTACGCGCATACTTCAAAGAATATCGCCCG 104625 37 100.0 37 ..................................... TCTGCTATCGGATTACAACGGATGGGGCAACGATCTT 104699 37 100.0 35 ..................................... TCATATAGTTCATTGCCTGGACCGTTGATGTACTT 104771 37 100.0 35 ..................................... GTAATAAATTCGTGGCTATTATAGAACAAAACACC 104843 37 100.0 36 ..................................... AAGCCTGCACATCCTTGCGTAAGTTGTAGTTTTGTA 104916 37 100.0 36 ..................................... TGTCCATAAAAAGTTTCAGTATAAGCAAGTTCAATG 104989 37 100.0 36 ..................................... AACGCTACTACTACTGCTAAAGATTTGGCTGTAGCC 105062 37 100.0 36 ..................................... GTCAGCGAAGATCCTATTTTGATTTCCGCTTTTTGG 105135 37 100.0 36 ..................................... AAGCCTGCACATCCTTGCGTAAGTTGTAGTTTTGTA 105208 37 100.0 35 ..................................... TTATTCGGCGATCTGCTGCGGATAGTTCGGGCATG 105280 37 100.0 36 ..................................... AACCAGTTGGCAGCAAAGGGAGCACATACTGGCTCT 105353 37 100.0 36 ..................................... GCCATTATTTTTCAGGTATTTGATTGTCGCGCATGC 105426 37 100.0 34 ..................................... TTGATAGGTGGAAGTCCTTGTCAGGGATTTTCTT 105497 37 100.0 35 ..................................... ATGAAATCAACTATCTGCCCAACAAATAATTTTGC 105569 37 100.0 35 ..................................... TTGAATACCCGCTGGGCAGTTTTCCTACCGGTGTA 105641 37 100.0 36 ..................................... TAGACGAGCTGCATCAGGCTGATAAAACCATCGAGT 105714 37 100.0 36 ..................................... AAATAAGACTCACCTTAGAAGCCTACAAAGTAGAAG 105787 37 100.0 36 ..................................... ACACAGGAAGTTGTAGCGTTTTAAATATGAGAGTTT 105860 37 100.0 36 ..................................... ATGAACAGAATTAAGCACTTGTAGGTAACGTGTTGC 105933 37 100.0 35 ..................................... AAAACAACACAGTTGTAAGCACGGAAATAAAGGGC 106005 37 100.0 36 ..................................... ATTCCGCCTTAAAGTTTATCCAGTCAGCATATGAAT 106078 37 100.0 35 ..................................... TCATCCGGCATTTGACTGTTCAAAGAAACGGTTTG 106150 37 100.0 38 ..................................... AATGCGAAAAACGCGGAATTGATGGATATGAAAAAACG 106225 37 100.0 36 ..................................... AGCCTGAATGAATAGTGAGTTTTTGACATGAAAAGA 106298 37 100.0 36 ..................................... AAATATACGCTCGACGCAAAAGCAAGTGCAACAGTG 106371 37 100.0 35 ..................................... TACTCGGAAACAACATAGCCCCAAATGCCCGAAAA 106443 37 100.0 36 ..................................... AAAAACAGAGTGATACACGTGCCTGCAGAAGCTTCA 106516 37 100.0 36 ..................................... CTGAATTTTCAAACACGGTAAAGAAAGCAATTACCA 106589 37 100.0 37 ..................................... TAAATCCTTCCTGATCTGCTATGAAGGCATTGTTTGC 106663 37 100.0 36 ..................................... GCTGAAAGAATTGGCGGGTAAGGTCGTCGGCTTGCT 106736 37 100.0 36 ..................................... AAACAAGAGCACTTACTGCCGGAGGTTTGCAATACG 106809 37 97.3 36 ..T.................................. GACGCCTTCCAATCACCAATCACTAAAAACTAACCA 106882 37 94.6 36 ....G...............................A GACGCCTTCCAATCACCAATCACTAAAAACTAACCA 106955 37 97.3 0 ....G................................ | ========== ====== ====== ====== ===================================== ======================================= ================== 124 37 99.9 36 CTCAAAGACCAAATCCAGTAAGAACAAGGATTGAAAC # Left flank : TTATAAGTTTGCGGAGTACAAAGACAAGCTTTACGACACGTATAAGCAGCAGTTGTTTTGCTATGCTGTGCTGATAGAGGATAATTGGGGAGCAAAGGTCAATCGCGGATTTATTGTTTACATCCGCAGCAAGAATAAATTATTGGAAGTTGAGATAAAACAGTCTGACAAGGAATTGATTCGTGAGAGCATTTCGGGATTTTTGGAGATTGTGGAGAAAAATCATTTCCCAAAAGCCACGAAATATAAGCGAAGATGTGTAAATTGCACCTATCGGAATATTTGCACGAAGTAATGAAAAAGGTTGTGGGAATCCGGTAGTAGATTTATAAAAGGAGAAATTAATTTTGGAGTCAACTAATTATATTACAACACCTTGCTGTCGCAAAAACGAACGGAAAGCGGGTGTAAAAACGTTCTTTGACGTATTAGAAACAATGAATAAGGGAAATGACTCAATATGTAACGGTCTGTTATTTAGCTGTTTGAGAGCTGATCGG # Right flank : CTAATTCGGAAATCCTTACTTCCAGTAAATATTCCCTCTCCAATCTCAACACCCTTCCTCAATTCTCCTTCCTTGGAGCCTTTTTCCAAACTCCCGGATGGGTTTCATATTTATTGGGATCATAATTCACATCATCAGATTGTATATACTCTCCTCTGTCGTTTATCCAGTAAGTCTGCGAACCTGATTCTACTGTATATTCCTTGCCATCAAATGGACTCACTACACGATATTGATCTGAAAAATAATCACCGGTTCGTTCCTGTACAGCATCTTGATCGTTCCACCTGCTATCGCGTGTAGCTGCATTGCTTTCGCGAATATATTCGGTAGTAGCTGCCGTATTTGCCATACGCTCTTGTGCTCCCTTCGAATTTATATTTCGCATTGCTGCAGCATGATTCTCACTCTCTTGTATCTGACCAGCCAATTGACTTTTATAGGCATTGATTTCATTTTGATTGTACTGTATATTTGCCAAACCGTTGATATAGTAGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAAAGACCAAATCCAGTAAGAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //