Array 1 1581799-1579794 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSIY01000001.1 Ruminococcus bromii strain AM32-13AC AM32-13AC.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1581798 36 100.0 29 .................................... AAGATTTGACGCTTGCCGACTCATTGCAA 1581733 36 100.0 29 .................................... TCAATGTGCCGTGCCGCAGCGTTGAGCGG 1581668 36 100.0 29 .................................... TATACCCACGGGTTAACCGTGCAGTCTTG 1581603 36 100.0 31 .................................... TGTATTAGGTGTGCTATCCTTTAACCATAGG 1581536 36 100.0 30 .................................... ATAAAGCGTTGAGGGATAATGGTGTAGATG 1581470 36 100.0 30 .................................... AGAATTAACGAAAGCTTATAACGAGGGAAA 1581404 36 100.0 30 .................................... CCTTAATATCTGGTAATAAAGATGGACTCG 1581338 36 100.0 29 .................................... ACAGGCAAGTCGGGAGCAGTCAAGGGCAA 1581273 36 100.0 29 .................................... TAATCAAAAATAAAAATGATTTGACAAAT 1581208 36 100.0 30 .................................... CCTGTTATTGAGGCAAAAAGACCTGAGGGT 1581142 36 100.0 30 .................................... TTAACATATCAGATTGCATGCAAAGTATGT 1581076 36 100.0 30 .................................... ATTGGTCTCGTTCGTTGTCTGCTTAATCAA 1581010 36 100.0 30 .................................... TGTTGACATTCTGAATGCAATCAGAAATTC 1580944 36 100.0 30 .................................... CTCGCCCTCGGTCATTAAATTAGCGATTGA 1580878 36 100.0 30 .................................... TGAGGTTATAAACAACATGGGCGGAGTTAT 1580812 36 100.0 29 .................................... AGTAATCACAAAATTGAGAAGTCCGAGCC 1580747 36 100.0 29 .................................... TTAAGAATCTTATTGACTCCGACTCGTTT 1580682 36 100.0 30 .................................... GATAATCCTGATAATAAGCAAGCCGTATGC 1580616 36 100.0 30 .................................... CAGGGGAAAAACAGAACTTTGACGATCTGG 1580550 36 100.0 28 .................................... CCCTGTGGAGCGGTGCGTTACAATGTCA 1580486 36 100.0 30 .................................... GCGAAAAGCACCATATCCGCCCATTCTTTT 1580420 36 100.0 30 .................................... TGTTTTTTATAATCCGCCCGAGGTTAAACA 1580354 36 100.0 30 .................................... ACTCTCAGCGTTCCGCCGACACAATAAGCC 1580288 36 100.0 29 .................................... AACTTGCGGAGCTGTGCGTGTGCGGTAAG 1580223 36 100.0 30 .................................... CACTCACAATCGAGCAATATCATGTCAGCG 1580157 36 100.0 30 .................................... GTAGTTAATCCGCAGGTCGATTCCGCAGTT 1580091 36 100.0 30 .................................... GTACATGTGTGTTGTGTGTGTGTGTAGGTG 1580025 36 100.0 29 .................................... TATAGTTACTTGTTAAACTATACATATAC 1579960 36 100.0 30 .................................... ACATTTCCGACCTTAATATGAATGGTGATG 1579894 36 100.0 29 .................................... CGTTAAAATTACAGGATCTTATATACTTA 1579829 34 88.9 0 .......................T...--......T | C,A [1579797,1579808] ========== ====== ====== ====== ==================================== =============================== ================== 31 36 99.6 30 GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Left flank : TTTTTTTGAAAATTTGTGTAATACAAAATATTTTCCGCAAATTTCAGAAATTAAAGCTTTATGTGTGAGCCTGTGCTGCGAGCTTTCTAAGGAAAATGATTATGATTTTCAGTTCTGCGAAAGTATCGAAACAATGGCATTAGTAAAATTGTTTTCATTTGCGCCTGCAGATGCCTCGGATGATAATGTCGGTCATCTTTTAAGATATTTCAAACTTATGAAAGAGTATCTTGGAATAAAGTGTTTTATTGTTCAAAATCTGCATATTTATCTTGATGACAGTGAATGTGAAAATCTTTTGGAATCCGCCGTTATGCACGGTATATATTTGCTTAACATTGAAAACTCAGTGCCGAAAGAAGTTTCTGAATACGAAAAACTTGTTGTGATTGATAATGATTTGTGCGAATTTTATTGACAATCATTATACAAATGTTATAAAATATCCTTATAGATTTGCCGTGTACAGTATAGTGGGTGCATTTTATTTTCAATTTGAG # Right flank : TTTACTCGTGGACTGTGAAAAAACAGCATTGCAAAAAACAATAAGGCACATAACCGTTATCACTTTCGGTTATGTGCCTTTTGTAATAAAATAAGTTTGTTAAGAATACCACGATTGATTACAGTCCAAAACAAGGAAGATTTCAGTGCGTTAATTTCCAAAGTAAGTTCCACCATGAAAGTTACTTTGGGGATTAACTATTTACTTTTTTGTTTAAGTTTGCGGTAAATATGAATTGTATAATCCGTTTTATTGTGTTATTATGTAGTAAAATAGTGTGCAACATTGGTGTTTTGAAAAAAATTATGTTGCTGAAATTAAACTTGAAATAACTGACGGGTGGCATATGGTTCGCAAAGTTGACAAAACAAAGCTTCTGACTGTTGTCGGGATAATTATATTCCTGTTTGGAGGTGCGGTGAGAATTTTTTCTCATCTTACTTCCTCGGCGGACAATTATATTGAAAATTTTGATGTTATTATCTTTTCGGGGCTTATTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //