Array 1 53287-52231 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCIM010000017.1 Bacteroides thetaiotaomicron strain DFI.2.24 LAGPDKCA_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 53286 29 100.0 35 ............................. AAAACAGGACTAAATGTAACACTGAAAAACACGGA 53222 29 100.0 35 ............................. AAGATGGTTGCAAATACAAAAGGATCGACAACAGA 53158 29 100.0 34 ............................. ACAGAAACTAATGCAACAAGCATGGGAGTATGAA 53095 29 100.0 37 ............................. ATACAAGAAGAATACACCTACATGGACTATTTTACGC 53029 29 100.0 35 ............................. AAAAAACAGTCAAGAAGAAAAACTGGGCGGACTGT 52965 29 100.0 37 ............................. ATTGGATAGACGGAGCCGGAGGCATCGCAGAGATAAC 52899 29 100.0 35 ............................. ATTTTCGTATAATAGTTTTGTCAATTGCCATTTTG 52835 29 100.0 34 ............................. AAAACCAATCCGGTGGAGGTAGCGCTACAACAAC 52772 29 100.0 36 ............................. GGTAAAAGAAGCGATATCTTCAATGATCAGTTTATT 52707 29 100.0 34 ............................. GTACTTTCTGGCTTTATAATAATAGCATTTCCGG 52644 29 100.0 36 ............................. GTTGTTGGCGAAATTTCGAATTGTCTCCCATTGCTT 52579 29 100.0 35 ............................. AATATACAGAAAAGTCTCTGTATTGCAATGGATGA 52515 29 100.0 36 ............................. AATTTTGCTAATTCGATTTGAAGTTCAGCAGCTTGA 52450 29 100.0 36 ............................. GAGGAACCGGCAAGTATCATCATTAAAGAAGAAATT 52385 29 100.0 34 ............................. AAAAGTCGTATACCGGCTTAGCAAATTCATAGAA 52322 29 100.0 34 ............................. TTGCTTCTGCCGTAGATCTGGCTACTGCACCGGT 52259 29 89.7 0 ...........G.....T......A.... | ========== ====== ====== ====== ============================= ===================================== ================== 17 29 99.4 35 GTATTAATTGGACCTTGCGGAATTGAAAC # Left flank : CTTTTAAGATGTATTGGTAGAGTATGTATGTCATTTTAGTATATGATTGTGGAGAGAGAAGAGTAGCTAAAATGTTGAAACTGTGTCGTAAATATTTAAACTGGATACAGAATTCTGTTTTTGAAGGTGAAATATCTGAAGTACGCTTAAAAGAACTCTTATCTTCAGCTAAAAAGTTTATAGATGAATCTGAAGATAGTATCATTGTTTTCAAAGGACCTAATCATAGCTCTTTGGAAAAAGAAATAGTAGGGAAAGAACGGTGTAGTATAGATAATTTTCTGTAACTTAGTTGTCGATGATTCTAATACTAGCTTCCTTCCCAGGGAAGATACTTTTTAAGAGCTCTTTGACTTGTTGATTTACAGCAATATAAGTGTAGTGTCGATCTCCAGTACTTTTTATACTTTTAGGGATCGACACTCTTTTGTTCTTTTAAAAAACTTTTTTAGAATTGTAACTTACTCATTTATAATGGTGATTGTTGGATTGATGAGAGA # Right flank : TTGTGATTTCGTTTTTTTGATTGATTGCTATTCTGATACTAATGAAAAAGACTTTAACTGGCTAGAGTGCTTTATTTTCGATATTATTTTATACATGAAGGTGACTTCAATTATATACTGATTCTTGAAATGTAGTTTTATAGAATAATAAGGTCAATCTTTGCTTTTAGTTTATTTGTTGTAGTTTGAATAATAATAAAAAAGATTTTTACCATTCATAAGAAATACAGATCTGAGGCACCCATTCCCATCTTTTTTGTATGGTGTTATATTGATATTGTACACTGGTTTTCAATTTCCAGCCTTTGCCTATTTTTAAAACAATGTCGCTGCCTAGTGTGGTTGGTATTGCTTCAGAGGAAAGTCTGCGGTATCTTCGGGTGTCCAGATTTTGTTCACCATATATGCTGAGAAGCCATTTTTTAGAGAGCTTATAATCCATTTGAGTTTGGATATGAAAGTGGTTTGAGCTTTCACTAAAGTTACTTTTACTATGCAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGGACCTTGCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //