Array 1 2824715-2822051 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073339.1 Prevotella denticola strain F0105 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 2824714 47 100.0 30 ............................................... TCTGCCAGAACCCGTTATTACCGTCAACCT 2824637 47 100.0 30 ............................................... ATGTACTGGCGGTCGTTCATCGCATCCCAA 2824560 47 100.0 30 ............................................... ACGAATGAGGTTGGAAATATGGGATAGATG 2824483 47 100.0 30 ............................................... CCCCTCGCACGATTATGACGAATCGTTGAA 2824406 47 100.0 30 ............................................... AAAGTCGGTAAAGCCTGACTTCTGCTTTAT 2824329 47 100.0 30 ............................................... TCAAGGCATCTTCTATCCCGAAGTACCTTG 2824252 47 100.0 30 ............................................... GCCACCGGTTTAGACTTTCCCCGGTTCTGA 2824175 47 100.0 30 ............................................... AAAAGTACGCTGCATCCGTCTCGAGAAAGG 2824098 47 100.0 30 ............................................... ACACCTAAATTAAATCTTAACATAAAACTA 2824021 47 100.0 31 ............................................... CAAGCGGCCGAGGTCGGCCACCACCGTCTTC 2823943 47 100.0 30 ............................................... TGCCACCGTGAAAGCTCAGAAGCTTGCTAA 2823866 47 100.0 30 ............................................... TGTCAATGCTGTTTCTAAGATTGAGAAAGA 2823789 47 100.0 30 ............................................... TGGACCGAGCGGTAAAGGAATTTCTTCACT 2823712 47 100.0 30 ............................................... GTCGATGAACCCACGTCTGTCGGGGTCATA 2823635 47 100.0 31 ............................................... TGTGCTCGTGGTAGTAAAACACATAATGGTA 2823557 47 100.0 29 ............................................... CGACAACAAGTTCCGTGAACTGGAGCGTT 2823481 47 100.0 30 ............................................... CGGGCTGTGCGTCCAGGGCATCACGCAGGA 2823404 47 100.0 30 ............................................... CCTACACCAGCGTTATCCACGCCGTCATAG 2823327 47 100.0 29 ............................................... TTCAATTGTCGATGGTTCTCTTTTCGATA 2823251 47 100.0 30 ............................................... TCGTGTTTTGTACGACATGCATTTCAAAAA 2823174 47 100.0 30 ............................................... AGGTGCGTCCGTTCCTCTTTAGCCGCCTTA 2823097 47 100.0 30 ............................................... GGCAATCGCATTGGTTCTATTGTTCCTTTA 2823020 47 100.0 30 ............................................... AAACATTAAGTTATATCTTTGAATACGTGT 2822943 47 100.0 30 ............................................... AGGCAACGCCCACCTTTCCGTGTGCGAGGA 2822866 47 100.0 30 ............................................... TATTCGATCCTCCGCACCTGTTACATCTCG 2822789 47 100.0 30 ............................................... TTTGAATGTTGATGTCATCAAGTATTTCAG 2822712 47 100.0 30 ............................................... TGACAGGCTTCAGTATCACAGAAAGAAGAC 2822635 47 100.0 30 ............................................... AAGTTCTCCCTTCTGCCCTCAACAATCGCT 2822558 47 100.0 29 ............................................... GAAATTCCTTGGTGTTCGTTTGAATTCTC 2822482 47 97.9 30 ...........................................T... AAAACTATCAGTCTGCTCAAAAATCAACCT 2822405 47 100.0 30 ............................................... TCGTGCTGGTGTAGGTAGCGGTTTTTCTGA 2822328 47 100.0 30 ............................................... CGGTTTTTCTGATGATTCTTTCAGTTTCAA 2822251 47 100.0 30 ............................................... TTGTTCCGCCATATAGACCAGCAAAATTAA 2822174 47 100.0 30 ............................................... TAGGACGAAGCGTCCGCACTATCATTTGCT 2822097 47 95.7 0 ...........T..................................G | ========== ====== ====== ====== =============================================== =============================== ================== 35 47 99.8 30 ATTGTGCTTGCCACTGCAAAGATACACATTTTGAAGCAATTCACAAC # Left flank : CAAGTCTTGCGAAGTGCTATAATGGGGAAGTTCGTGAAATCTCTTATCCTTCTTTTCTTTGATGCAACGACTTAGCGAATATAGGGTTATGTGGGTGATGGTCTTTTTCGATCTTCCAACTAATACAAACAAGGAAAAGCGTGCTTATACTATTTTCCGGAAAGATTTGATGAAAGATGGATTTACTATGTTTCAATTATCAATCTATGTTCGTCATTGTGCAAGCAGAGAGAATGCAGATGTACATGTGAAGCGAGTAAAGTCTTTTATGCCTAATTCTGGCAATGTTTGCATTATGGTTATTACAGACAAACAGTTTGGTGAGATAGAGCTTTTTTGTGGGACACAGGCACAAACACCCAACGCTCCTGGGCAGCAACTTGAATTATTCTAAAAGAAAAAGAGTCCTATCATTACCAATAGGACTCTTTTAGATTGCAGTTTTTATTTTGCACAAAAACAATATTACTAACTGAAAATCAGAGCGATACTTATTTCTG # Right flank : CACCAAACGGACGACTTTGTAAACTTAAACTCGTGTTTTGACTTTTGGTCAGTCTTGCCTGCATCCTTACAGATTTATTCCTGGCTTTCAGTTGAATGCGTAGTTGGCTGCTGCGTAGAGCGTATAGGCTTGCTGCGAAGGGATGATCGTTTGCCGAATCCATAAATCATCTCCGTTTCCTGCACTTATATGTTTATTGGAGGCTGTCCGATAAAACTCAAACAGCATGATCCCCCTGTGCAATCTCTTTTGAACAGACCATTCTGCATTGTCTTCGGAAAAGTAATCCCCTGATGAAATAAGTTCTGCCGGCACAGCTCTTCGCTAGCTGCAAGTTGGCTCCCCTCCCGGCAATATATGGCATGGTGCGGGCCATCAACACGCCCGGTGTCTGTCGGCAACTCCATAAGTGCCTGGCATCAGCATATCTGCAGGAAAGGCCGGTTTAATCCAGTCATTATTCTATACAGCAAGACGCTGATGGCTGACTTACACGGCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTGCTTGCCACTGCAAAGATACACATTTTGAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.70%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //