Array 1 35002-33245 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFKO01000012.1 Legionella pneumophila strain C3_2 NODE_12_length_88627_cov_19.5074, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 35001 37 100.0 34 ..................................... TAGATATAAAAAGATTAAATCTTCTAGCGCACAT 34930 37 100.0 34 ..................................... TCACTACTCCTGAAGGTTATAATTTTTGCTATAA 34859 37 100.0 36 ..................................... TTCGAATACAATCCTAGTGTCTCTGTGTGAATTAAG 34786 37 100.0 34 ..................................... CAGGCACTGGTTCACTAGACACTGTAACATCTAT 34715 37 100.0 35 ..................................... CAATAACAAGCGAGCCTTTTGTACTAGAAGGTTTA 34643 37 100.0 34 ..................................... CTACCAGTTAATCGTAACTCAATCTCTTTTTCAA 34572 37 100.0 34 ..................................... ATAGAATACATAAGTGCAAATTATTAAATGTTAC 34501 37 100.0 34 ..................................... TGAATGTAGAAACCAGATGCCACGAATTATTAGA 34430 37 100.0 35 ..................................... TTTGTATAAACGTTCTGATATGACTTAGGTAATCT 34358 37 100.0 34 ..................................... CTAACCTGATTGCTCAACAAATAATGCTATTGGC 34287 37 100.0 34 ..................................... TCACTTTAGGCCAACGCCGATCCTCCGCTTCGAA 34216 37 100.0 35 ..................................... CTCACATCTTACCCTCAGGGCGGATATTGTGAATC 34144 37 100.0 33 ..................................... ATTAATAATATTTTAGAAGATTGGCACATAATA 34074 37 100.0 34 ..................................... TGACGCAAAGGATTTATTAAAAACGCCTTGTAAT 34003 37 100.0 31 ..................................... ATTTTACCTTTTAACACATATTGATAGGCGT 33935 37 100.0 36 ..................................... TCCATAACTGAAACGTCCTTATGCCTCAACATAATG 33862 37 100.0 34 ..................................... GAATTTGTCGGCCGCATAGACCGCTTTTATCAAA 33791 37 100.0 36 ..................................... CTATTGCAAGCTAGTTTGATCGTGTTATTATAAGAA 33718 37 100.0 35 ..................................... CCTGAAAACCCGCCACAACCCGCGCCAGACTTGAA 33646 37 100.0 34 ..................................... ACCAAGTCGAAACAACATACCGAGACCGTGTTGA 33575 37 100.0 35 ..................................... TACATTGTTACGTTCATTTCACTCAGTTTTTCATA 33503 37 100.0 37 ..................................... TTATAACATCGGGATGGCGGTTTATTGGTTAAGTAAC 33429 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 33356 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 33281 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 25 37 99.5 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //