Array 1 15628-16644 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QQPO01000037.1 Staphylococcus pseudintermedius strain ST64-6 NODE_37_length_19570_cov_23.6509, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     15628	    36	 100.0	    30	....................................	GCAGAAAAACCCTTTGTCAGTTATGGGAGC	
     15694	    36	 100.0	    29	....................................	GACAATTGCATCATCGTTGTCATCTGAAG 	
     15759	    36	 100.0	    29	....................................	CTTTCTAAAAAACGTTGATACGCTTCTTT 	
     15824	    36	 100.0	    29	....................................	CATTACCTTTGTTTGCGTTGTTTGATTCT 	
     15889	    36	  97.2	    30	............................A.......	ACATCTGAACCTACCGCGCTATCGCTTACT	
     15955	    36	 100.0	    29	....................................	GACAATTGCATCATCGTTGTCATCTGAAG 	
     16020	    36	 100.0	    29	....................................	CTTTCTAAAAAACGTTGATACGCTTCTTT 	
     16085	    36	 100.0	    29	....................................	CATTACCTTTGTTTGCGTTGTTTGATTCT 	
     16150	    36	  97.2	    30	............................A.......	ACATCTGAACCTACCGCGCTATCGCTTACT	
     16216	    36	 100.0	    29	....................................	GACAATTGCATCATCGTTGTCATCTGAAG 	
     16281	    36	  97.2	    29	............................A.......	GTTAACTGAACTCGAGTGTTGGCGCTTGA 	
     16346	    36	  97.2	    30	............................A.......	ACAGGCTTAAAGAATCATTACAGTTTGCTA	
     16412	    36	  97.2	    29	............................A.......	AGTAATGATTTAGAAAAGCGTGAGCATAA 	
     16477	    36	  97.2	    29	............................A.......	AGTTTTTTGGCGAGAACTAATGGGATTTC 	
     16542	    36	  97.2	    30	............................A.......	GTTATGATGTTTGGCGATATGGGTCGTCGT	
     16608	    35	  88.9	     0	..........................-.CA.C....	|                             	TC [16641]
==========	======	======	======	====================================	==============================	==================
        16	    36	  98.1	    29	GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC	                              	       

# Left flank :   TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTCACTAATCATCCTACTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGTGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCTAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG
# Right flank :  CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAAATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCACATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG

# Questionable array : NO	 Score: 5.99
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC
# Alternate repeat :   GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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