Array 1 67032-66600 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHET010000010.1 Enterococcus durans strain MEZED165 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 67031 36 100.0 30 .................................... TCATATGATTAATCTCCTTTATGATATTGT 66965 36 100.0 30 .................................... ATTTAGAAAAAAAATAATTAATCGAGATCA 66899 36 100.0 30 .................................... AAATGGTTAGTGAAATCATTGAACTAACAA 66833 36 100.0 30 .................................... AGCAAGCATTAGATATTAGTAAGCAAGCTA 66767 36 100.0 30 .................................... GAGTCGATTAGGATTAAAACGGCAACGGAT 66701 36 100.0 30 .................................... TCTTTCGCATGATTGATTCTGCCTCCTCTT 66635 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : GTTGAAGTAAAATCCATGATCGACAAATTGACCACTACGATCAGCGAATTGATCGACTACGAGCTATTGGATCATGAATTGGATTTGGAAAGTGATGAAATCACGGTATTAGAGCTGTTTAAAGCACTTGGTGTAAAAATTGAAACGCACAGTGATACCATCTTTGAGAAAATATTGGAGATATTGCAAGTATACAAATATCTATCTAAAAAGAAATTACTAGTTTTCGTCAATACATGCGCTTATTTTACGTTAAAGGAGCTATTGGAGATACAAAATTACATCTCTTTGTACAACATGGATGTTTTATTTCTTGAACCACGTAAAATTGAGGGAGTCCCTCAAAAGGTTTTAGATAAAGACTATTTTTTGACATAAAAACTATGCTAAAATGAACTTAAGAACGAATGACTTGAAGCAGTCATTCAGCATTCAAGACGAAAGTTTTGCTATGGACGAGTAGTTCGGTGATAAATCACGTAGAAAAAATTTTCTGCGAG # Right flank : AGAGCTAGGATTGATTGCTACAGTGGGTGTGTTTTAGAGCTATGTTATTTGAATGTCTAGAGGATGAAGAATAGATGACCGAGGGGTTGTTTATTCTTTTTTTCATATAATTGGACGGCGATGCTTTCTGTTAGTAACATAAAGGAGAAGGGTGGTTGGGGATATGTTTGATTCAACGTTGATGGTTTGCTTAGATTGGCTGATGACGATTTTAAATCTTGCTTCGATCATTATTTTAGTGGTCGGTGTTTTTTTAGTATTAAAAACGTTGTTTGATTGGCGGACTTTGAAGAAAGATTATGGACAGCGAAATAGTCGCAATGCAGAGATTCGCAAATTGTTGGCTAGTTATATTTTATTAAGTTTAGAAGTTTTAGTGGTGGCAGATATCATTGAATCTGTCATCAAACCAACTTGGACAGATATTTTAAAACTTGCTTTGATTATTTTGATCCGTACGATCATTTCGTATTTCTTGAATTTAGAGATTAAAGAACAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 104720-105217 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHET010000003.1 Enterococcus durans strain MEZED165 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 104720 36 100.0 30 .................................... TAAGTACCTTATGCCTGCATGTGGACTAAG 104786 36 100.0 30 .................................... TGTTGTTGATAAGAATTATTTTGATCCATT 104852 36 100.0 30 .................................... CTGTTTGTGATTATTTATTAAATTATAGTA 104918 36 100.0 30 .................................... TTTGTGGTACTGAATATGTCAGTTTGCTAA 104984 36 100.0 30 .................................... AATTTATGACGCTGATATGGAATTGCAAGC 105050 36 100.0 30 .................................... CCACATTCAAAATTAAGAGAAGTAAAACGT 105116 36 97.2 30 .............T...................... TATTGTCATGGCTGGCGCGAATGGCGGTTT 105182 36 91.7 0 ..........................T......GT. | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 98.6 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : GAAGTAAAGCGAAAGATCATGGTAAAGGAAACCAAATCGAAGGACGTATTTTTGAAGGGCAAAAAATGGTCGTAATCGAAGATCTGATTTCCACTGGCGGAAGTGTACTAGAAGCAGCAGAAGCTGCTAAACGTGAAGGGGCGAATGTTTTAGGTGTGGCTGCTATCTTCACGTATGAATTACCAAAAGGAAAAGCAAACTTTGCTAATGCGGAAATGCCATTATTGACCCTTACGAATTATTCCGTGCTGATTGAAGCAGCACTTGAAGAAAAATACATTGATGAAACAGAATTAAACCTATTGAAGGAATGGAAACAAGATCCTGAAAACTGGAAGAAAAACTGATTGCTTAATATCTGTAAAAAATATTTTAGCCTCAGAAATAAAATGGTATACTAGTGTTGAATAAACAACAAATAAAGAAGTATTCAAGACGAAAGTTTTGCTATGGACGAGTAGCTCGGTGATAAATCACGTAGAAAAAATTTTTTCTACGAG # Right flank : AGCAACT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //