Array 1 2152322-2150701 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017716.1 Lacticaseibacillus paracasei strain TK1501 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2152321 36 100.0 30 .................................... CTAATTGTGAGGAGAGTATACTTCCCCCAG 2152255 36 100.0 30 .................................... CCATGATTAACCCTCAACCTTTGCTTCAGG 2152189 36 100.0 30 .................................... CTTAAGTTTTGTCATCAGCACTGACCAGCC 2152123 36 100.0 30 .................................... CGAGTCGGCACGGATTCAACATGCGGCACA 2152057 36 100.0 30 .................................... ATACAAAAAAAATCATACAGCCTGCATCAC 2151991 36 100.0 30 .................................... CACTTGATGCTCACGCCATCCCAAGCATTT 2151925 36 100.0 30 .................................... CGGCATTGCCTCGGCGCATGGCTGGGGTGC 2151859 36 100.0 30 .................................... AAAAACAAAAGTTCAAAAGCGTGGTTCAGC 2151793 36 100.0 30 .................................... AAAAACAAAAGTTCAAAAGCGTGGTTCAGC 2151727 36 100.0 30 .................................... CTAAACGTTCGCGAACCTCATTCAAGCTAA 2151661 36 100.0 30 .................................... ATGGATGATGCATTTGATCGACAGTGGCCC 2151595 36 100.0 30 .................................... GTGTTAGACTTAGATGTGGATGTTGCCCCG 2151529 36 100.0 30 .................................... ATACCAAGGCGGTGGCATGGCGTATACTGA 2151463 36 100.0 30 .................................... GCTATCTGGCTTGAATTCCTTAATCGATTT 2151397 36 100.0 30 .................................... AAGCCGATGATATAAAGAAAGACGCCCCTT 2151331 36 100.0 30 .................................... GAGGCTTACCCCGTCTTTACCAGTTGGTCC 2151265 36 97.2 30 ..............C..................... TTGTTCATAGCAGCGTTGGCACGGGTATTG 2151199 36 100.0 30 .................................... ATGAAAGCCAGCGAAGGCACATTTTTTACT 2151133 36 100.0 30 .................................... CGTGTTATTGTAATTAGTCGCCAAGTCTTG 2151067 36 100.0 30 .................................... GCTGTCAAGTATCTCATGTCCTTCTAGAAA 2151001 36 100.0 30 .................................... AACGTTGACCGCTCTGTCTCACGAAACTGG 2150935 36 100.0 30 .................................... GAACTTTGTATCGTTTCTCTTTGCGCACGG 2150869 36 100.0 30 .................................... ACGTTAAACGTACACCATGCCGCACAGTCC 2150803 36 100.0 30 .................................... GACGATCTCGCACATGCTCAGTGATATGCG 2150737 36 91.7 0 ..........................T..A....C. | T [2150705] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.6 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGCTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGGATTTAATTCAAGATCCATTCTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTCGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGACTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAATGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTTGTTCTCATTGAGTTCTCAAAAGTGAACCGAAGGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACCA # Right flank : CATAATTCCGAGAAAATGAATTGGCGGATTTTAGAGTCAATCTCATGCTAGAAATAACCAATTCCGCAACTTTAACGTCTTCGGTCTGGTTAGCGTTCGCAATATTGATGGCTCTAGCAACTCAGGTAATTGCCGGTGCGGTTTTCGTGGACCGCTAACATCTTTATTATGCCGTCAGCCATGCTTCAAAGTTAGGGATGTCTTTAACGTACCTGCTGGTGTTGACTATGACATCTGCTACTCAATTAATATTGCCGATTTGCTGACTACACAACTGCCTCTGTAGTGGGAATATAGGCAGTGACGCCTGTAACAATATGATTTAACATTCAAGTTTCTTCAAGGGAAAACATATGCGAGTGCTCATGTCCTTCAAAATGTTTGATGACTGCGAACATCATCGATTATTGTGAAACAGCAGGCATACCTGTCTAAACTTTTTTCGATCAGTGCTTAATTAACGAAGTTCTTCTGTGTCAGTCGCAACCTGAGTTGAGAGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //