Array 1 103194-106405 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEMM010000010.1 Acinetobacter baumannii strain MRSN2023 MRSN02023_contig00010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 103194 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 103254 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 103314 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 103374 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 103434 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 103494 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 103554 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 103614 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 103674 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 103734 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 103794 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 103854 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 103914 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 103974 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 104034 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 104094 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 104154 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 104214 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 104274 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 104334 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 104394 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 104454 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 104514 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 104574 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 104634 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 104694 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 104754 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 104814 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 104874 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 104934 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 104994 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 105054 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 105114 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 105174 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 105234 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 105294 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 105354 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 105415 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 105475 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 105535 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 105595 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 105655 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 105715 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 105775 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 105835 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 105896 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 105956 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 106016 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 106076 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 106136 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 106196 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 106256 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 106316 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 106376 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //