Array 1 195920-193194 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTKY01000005.1 Pseudoalteromonas sp. 31A1 Scaffold5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 195919 28 100.0 32 ............................ ATTATTTTATTGTATAAACCCGTGAAATACTC 195859 28 100.0 32 ............................ ACCCCGTTAAATAGCATTCGCCCTGCCCTTCG 195799 28 100.0 32 ............................ ATCAACATCAATACCAACATCACCCACGCTTA 195739 28 100.0 32 ............................ TGCTCACACATAATTAATCTATCTGTATTGCC 195679 28 100.0 32 ............................ AGCCCTTATGATGATTCAATAATGAGCGAAAT 195619 28 100.0 32 ............................ ATTCACACACAAGTCATCATTAATAACCGTGA 195559 28 100.0 32 ............................ ATTGCAGAAATTACCGCAGGATATTCCGAATC 195499 28 100.0 32 ............................ ACGGCGGGGCGTGGGGCGAGGAAGGGCGTACC 195439 28 100.0 32 ............................ AATTAGGGCTCGCCTGCGGTAATGATAAAGAT 195379 28 100.0 32 ............................ GTTGAAGATATGGCAAATAAAGCCAAGTTAAA 195319 28 100.0 32 ............................ AGTAGCACAGCTAAAGAATGCGCGCTTTGAAG 195259 28 100.0 32 ............................ TATTCAACATCAATAATTTAAATAGTGTTTAC 195199 28 100.0 32 ............................ TGTTACAGCAGCCGCCACCCGCCGCCAAGCGA 195139 28 100.0 32 ............................ ATCTAGTGACGGATTCCAAGAACGTACCGTAA 195079 28 100.0 32 ............................ AATAACCGCCGCTTGTAACCATGCGGGCTTAC 195019 28 100.0 32 ............................ GCTAATCACATTTTAAAACAAAGGTGGCGCAG 194959 28 100.0 32 ............................ ATTCAACCGCTGTAATCGGTATCGTGGCTTTC 194899 28 100.0 32 ............................ GCTACAAGTGGCCCTGCTTAACATGATGACAA 194839 28 100.0 32 ............................ ATCAAGTTTCCGATACTATGGCTCATTGATTG 194779 28 100.0 32 ............................ GCGCCCATAACCTTGTATTGACCTTTCATAGT 194719 28 100.0 32 ............................ ATTGCAGCATAAGCTTTACCACCGTTTTTAAG 194659 28 100.0 32 ............................ TAAAACATGGTCTGCTGGTTGGACTGACATGG 194599 28 100.0 32 ............................ AATCTGAATTGCTCCAGGTAAAATACTGTGGC 194539 28 100.0 32 ............................ GACCTAACGACTACGAAAGCGTTGATTCCTCA 194479 28 100.0 32 ............................ GCTACATGCAATCAAAGGCTATGTATGAAATG 194419 28 100.0 32 ............................ TTACCACTGTGTAGGTTCTGATGTTAAGGTAG 194359 28 100.0 32 ............................ AAGGCATCGGCAGCAGCAGAGCAGATGGGCAA 194299 28 100.0 32 ............................ TTGATAACGATGCAATTATAAGTTTAATTAAG 194239 28 100.0 32 ............................ TCGCCCGATATTATGAATGCGTTGCTAATATC 194179 28 100.0 30 ............................ ATATAGCAGCCGCCACCCGCCGCCAAGCGA 194121 28 100.0 32 ............................ ATCTAGTGACGGATTCCAAGAACGTACCGTAA 194061 28 100.0 32 ............................ AATCGGTAACTTTTTAGCACAAGTACAGTTCG 194001 28 100.0 32 ............................ ATTCAATCATATCAGCGATGCTGTATTCAACC 193941 28 100.0 32 ............................ TAAAGGTAACTTTGCATTATCTCAAGGTGATT 193881 28 100.0 32 ............................ CGCCGCCAAGTTACCCGACATAGCCAATGCAT 193821 28 100.0 32 ............................ TAGAACAACAACAAATCTAGCATGTACTTGGT 193761 28 100.0 32 ............................ AAGAGGAAAACGAAATTATGTGTCAATTAGTT 193701 28 100.0 32 ............................ ATTCGAGCGCGACAATTAGCTTGAGCAGGGCA 193641 28 100.0 32 ............................ ATTCAACCGCTGTAATCGGTATCGTGGCTTTC 193581 28 96.4 32 A........................... TATTCATGCCTCATTCGGTAATTTTTTAATAA 193521 28 100.0 32 ............................ AAACGCAGGCTTTTTCCTAAACTCTGAAAAGC 193461 28 100.0 32 ............................ GGTCAAATAGCAAAAACACCAACCGCTAAAAA 193401 28 100.0 32 ............................ TGTCTAGCATGACGCAGACACGCGACCTTCAC 193341 28 100.0 32 ............................ ATTCACGGCACGCACCGTAGAAATATCATTTA 193281 28 100.0 30 ............................ ATTGAGTTCACTTAGGGTCCTCAACAACAA 193223 28 75.0 0 .C....A..T...T.T..........GG | G,T [193198,193217] ========== ====== ====== ====== ============================ ================================ ================== 46 28 99.4 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAAAATCAATAAAACCCGTACCAGACAAGGTGGCACACGCGAGTTTTGTTAGGGTGCAAGTCAAAGGTGAAGCGCGTATAGAAAAAGATATGCTTAGCAAAGCGCAGCGTTGGTCTGAAAAATCTGGACAACCGCTTGATATTTGCTTAGCCGAGCTTGAAAAAAGTAAACCTAAAGCGAATAGCAACGCACCTTTTATTTGGTTAGAAAGCCAAGAAACGAAACAACGTGATTTAGCTAGCAGTAGAAAATTTCCACTGTTTATCAAAAAGGTAGACGTTGCCGAGCAACAATTTGGAAAGTTTAATTGTTATGGTTTGAGTGTAAATCATAGCCATAAAGAAAAACTGGCAAGTATTCCCCAGTTTTAACCTTTATTTTTGCTCTTTAAAAATAAGAAACTAAAACAACAAGTTACAACAAGCGATAAAAATAAGGTAAAAATTCATATTTTACCTTAATCCACTGTTGTAACTTGTTTTTTGCGTGATATTCTATT # Right flank : TCAATTAACTTGCTCTCTAACTTACTCAATAAACATAGTTACTAATCGAAATATAATGGCAAGCACACCCGGCAATTACAAACAAATGCCAAATTGCATGGCTAAACTGGGTGCTTTTAGCACTGTAAAAAAAAGTGCCTAAACTATAAAAAATACCGCCGGCAAGTAGCCAGTAAAGTGCTTTTACATCAACACTTGAATAAAGCGGATATACAATAGCCAGTGCAAACCAACCCATGAGTAAGTAGGTGGCGAGTGATATTTTTTTATTACCGTTTTTTACAAATACTTTGTACGCAACGCCCGCCAGTGCCACAGTCCATATAAATGTAAGTGTTGCCCATGACCAAGCACCGGTTAATGAGATTAATAAAAAGGGAGTGTAGGTGCCGGCAATTAATAAGTATATGGCGCAGTGATCGCACTTTTTATAAAAGGCTCTTAAGCGCGGTTGAATACTGGCATGGTACAAAGTGGATGACAAAAACAGTACAAATAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //