Array 1 105528-106352 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOL01000005.1 Deinococcus aerolatus strain JCM 15442 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 105528 35 100.0 35 ................................... GGGTCCGAACCGCTGAACGTGGTCAGGTTGATGGT 105598 35 100.0 38 ................................... TTGTCAGGGCGGTGCCCGGTGGCCGACTCGGTGTACGT 105671 35 100.0 36 ................................... TATCAGGAATTAACTCATATAAACTATAGGTATCTA 105742 35 100.0 34 ................................... AGCTTGTTCAGCACGTAACGCAGGCCGTTCTCTT 105811 35 100.0 35 ................................... ACGATGAGCCTTGCCCGTAGCAACTCGGATGCGGT 105881 35 100.0 39 ................................... ATGTCTTTCAGCAACTTCTCTCGGAAGATGTTCATGGTT 105955 35 100.0 46 ................................... ACGGTGCCGAAGTAGCCGATGTTGGCCGTGGCCACCACCGACAGGT 106036 35 100.0 37 ................................... ACTTCGGTCGCCGCGCCATTGGCGAGGGTGTACTCAG 106108 35 100.0 35 ................................... GGGCAGCGGCGTACAGTTGCGTCACGTCTGCGATG 106178 35 100.0 35 ................................... TCGGTGTCCATGTCCACCTCCCAGACATCACCGGG 106248 35 94.3 35 .T..................C.............. AGCTTGAGCAACTTTTCCCGCTCATTCTTGAGCGT 106318 35 94.3 0 .T..................C.............. | ========== ====== ====== ====== =================================== ============================================== ================== 12 35 99.0 37 GCCTCAGCAGCATTTCCCTGTTAAGGGATTGAAAC # Left flank : CCGCGAGGTCGAGGCGCTGCTGACCACGCTGGCCGCCCAGGTCCGCGCCCGCGCCGCCTGACCTCCACCCCCACAAGGAGCCCCATGAACGATCTGTACTTTAACGACACCTGCCCGGACTGCGCCGGCACCGGCTACGACGATGGCCAGTGCCACACCTGCGGGGGCACCGGCACCCCCCTTGATTTCAGCACGCGCCCTGACCGCGACGAATGGGCATGGCTGGACGAGCTGGATGAACCCCAGGAACCCTGAGCGTTCTGAGAGGGCAAGAACGGAACGAAAATGAAGGTTATGCAGATGAGAGAACCAGATGTGCGGCAGGACAGCGAAAATCACTATACATGGTCCTCGTTTTCTCATTTTTGTTCCGTCGTCGATCAGCACGGCGTTCAGGAGCGATCTGGACTCTCATCTTCGTCAGATGAATGTATACTCATGATCTACTTACAGTTCACATGCTAAAAAGAACGTGCTGCACGGCCTTGCCTGACGGTAGA # Right flank : CGAACCCGCCTGCACTGCCCGGGTTCGTTTTCGCGCGCTGTCCAGGCAGAACGCCGCCGAATGGCTGAACTGCACGCCGACGGCGCTCTCCGGAAGCAGTCTTTCCGGATGTTCGCGCGGCGCGTCATACGGTGGATATGGCAACCCTGATTCCCGGCTGGCGTGAACTGAATACCCTGTCCACGCCGCTGACCGCGGGCGAGGCGCACCTGCTGGCGTTCCTGGAAAGGGACCTGGGGCCAGAGTGGGAGGTGTTCGCGCAGCCGTACCTGAACGGCACCCGTCCGGACGTGGTCGCGCTGCACCCCACGCGCGGGGCGTTGATTCTGGAGGTCAAGGACTGGGCGCTGGAGTGCTACTCGTGGGGCCAGGGGCGCCGGGAGTGGCGGGTGCGCGGTTCGCACGGTGAGGGCGCGGTGCAAAACCCCTTCGGGAAGGTGGAATTCTACCGGGAGAACATCCTGCGCTTCCTGGTGCCGGAGGTGGGGGCGCTGGTGCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAGCAGCATTTCCCTGTTAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 2 115560-117585 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOL01000005.1 Deinococcus aerolatus strain JCM 15442 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 115560 35 100.0 34 ................................... CTTTTCAGGTGCCGTGTTTCAACCTGTCTCAGTG 115629 35 100.0 40 ................................... CTGGAGCTGGTGGCGGAAGTACCAGCCCAGCAGGCGACGG 115704 35 100.0 35 ................................... TCCCTGATCCGGCTTGGGTTTGGCCCAGTCCAGTC 115774 35 100.0 36 ................................... GCGGCATCCACGGCCCTGCGCAGCACAGCCCACGGG 115845 35 100.0 36 ................................... ACCAGCAGCAGTGCTTATGACTGTGCTGGTTATGTG 115916 35 100.0 37 ................................... CCTGGCACTTTTCGTCAACAACGCTGCTCTGGCCCAG 115988 35 100.0 38 ................................... ACCAGATCAGCGTTGAGGGTGTGAACCCGGATACGGGC 116061 35 100.0 33 ................................... CTCCTGCTGTGCGGCCTCGATCTCGACCACCTT 116129 35 100.0 37 ................................... CAGCGTCCACCCCAGCCCTCAGGAGCAAAGGCCTCTG 116201 35 100.0 38 ................................... TCTGCGACGTGCACGTTCAGGTCGCGTGCGATAATCAG 116274 35 100.0 36 ................................... AAGAAGTCCGCGTTGAACTCGGTTGCGTCAGCGATC 116345 35 100.0 40 ................................... GCTATCATCCAGCGGCTCGGAAGAGAACTCCGGGTTGAGG 116420 35 100.0 37 ................................... AACTGGGTGCGTTTGCCGGTGTAGTCGTGCAGGTCCA 116492 35 100.0 37 ................................... AGAATCTCCGACTCCCGCTTGGCCCGTTGTCTTGCGT 116564 35 100.0 36 ................................... CCTCTCCCCTGTGCGCTGAGCCTGCCTTACGCGGCT 116635 35 100.0 32 ................................... TTCCGCGCCCTTGAGGACAGTGTAATCGTACC 116702 35 94.3 35 .....G..........T.................. TGTTGTTTATGGCAATCATCAGGGCAGCGTTGATC 116772 35 100.0 37 ................................... GTTCCGACCGGGATGTACGTGAAATCAAATTCATCAA 116844 35 100.0 34 ................................... CCTCGAAGCCCACGCGCATCGCCTCGTCCACGGG 116913 35 100.0 37 ................................... ACTGATACATCACCGCGTTGCACTCACGCTGTACCGC 116985 35 100.0 37 ................................... ACGGTCCAGCTTGATCGTAACCTCCGTTGCGGGAGAT 117057 35 100.0 41 ................................... TGCGCCTTGCTACGCTTGACCATCTTGCTAACGGTGATGAA 117133 35 100.0 33 ................................... CTGGCCTCCTTGATCATCATCTCGATGCGCATC 117201 35 100.0 36 ................................... CTCGAACGGGTTGCTGGCCTTGATGCGGGGCGTCTG 117272 35 100.0 36 ................................... AGCCCCAGCGCCCGCCACCCGTTCATGATGCGGATG 117343 35 97.1 33 ................T.................. ACCGTGAACGATGCGCCCGTCAGGCGGTGGGCC 117411 35 97.1 35 .................................G. CCTTCTCCCATTTCCTCTAGCTCGCTCGTCAGGTA 117481 35 91.4 35 .........G....................A.C.. CCGCCTACACTGTCCTTTACCAGATATGCCCGCTC 117551 35 80.0 0 .....C..............TC........CTCC. | ========== ====== ====== ====== =================================== ========================================= ================== 29 35 98.6 36 GTCTCAGCACCATTTCCCTGATAAGGGATTGAAAC # Left flank : GTCCACCTCGGCCAGCGGATACCGCGAGGACGCCACGCGGTACGCCCCGGGCTTCCCTCCCCCCTCGCCAAGATGCTGGAAGACCACGTCCAGCCCCCGGGCCTGACCGCTCCGCAAATGCCGGAGCAGCGCCTGCAATTCCTGTTCCATTGGCCACCTTTTGTATTAGCGAAGTATTAGAGCCCACGATAGATTACGTGAAACGGGTAAGGCCCGCTTCCACATTTGCGTATGGCCCCCACCGGGGGAAAGCGGAAAGGCCCACACGCCCATGACGGAACGAAAATGAAGATTATGCAGATGAGAGAGAAAAATCCGCCGCAGGACAGCAGGAACAGCTATACACGACTCCATTTCTCTCATTTTCGTTCCGCCGTCTACTGGCACGATGTTCGGAGGGGATACGGGCTCTCATCTTCAGCGGGTGAATGCATACTCATCATCTGCTTACAGTTCACATGCTAGAAAGAACGTGCTGTACGGCTCCGCTGAAGGGCAGA # Right flank : CGTTCCCCTGTTTCCGCTTTGTGTCACACCCGGCCACACGGGGGCATGACATCTGTTCTGGTTCAGACGCCGGGGGCGGCCATCAGTGCGCGGGGCGGGCAGTTGATCGTCGAGACAGGAGCAGGCCAGCACGCGGTGCCACTGGGCCACGTGACCGAGCTGATCGTGATCGGGAACGCGCGGATCAGCACGGCAGTCATTGCGGATCTGGCGGGCCGGGGCGTACCGGTGCATCTTCAGGCGCGGGCCGGGACCGTGCCCTTCAGCGTGCTGGGGAACGTGGAAGGACAGGTGGAAGCCCTGCGCGTTCAGGTGCTGGCCTCACCCCAGGCGCGTCTGGTGGCGGCGCGGGCGCTGGTGCGGGCGAAGGTGACCAACGCGGGCTGGGTGTTGCGCCGCCTGCGGGTCAGCGGGGTCCTGGACGCGCCAGCCGTGGAGGAGGCCGCGGACGAGAACGCATTGCGCGGCATGGAGGGCGCGGCGGCGCGGCAGTACTTTGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGCACCATTTCCCTGATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //