Array 1 188066-188628 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MLDM01000006.1 Campylobacter jejuni subsp. jejuni strain CJ070CC21 contig006, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    188066	    36	  97.2	    30	T...................................	GTAACTATTGTAAATGGAGTTGAAAGAGTT	
    188132	    36	 100.0	    30	....................................	ACTTAAATCAATTTCAAATTTATCACAATT	
    188198	    36	 100.0	    30	....................................	AGCTAAATTTTCATTAACTCTATTAATATA	
    188264	    36	 100.0	    29	....................................	CCATTCTCATAAAATATTTAGCCATTATT 	
    188329	    36	 100.0	    30	....................................	CTACAAGAATGAGGATGATGATATTTTACA	
    188395	    36	 100.0	    30	....................................	AGATGCTTTAACAGTATGTTCTTTAGCAGG	
    188461	    36	 100.0	    30	....................................	TCCTTGTTTTTTAATTTATTTTTGTTATAT	
    188527	    36	 100.0	    30	....................................	CTACAAGAATGAGGATGATGATATTTTACA	
    188593	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	  99.7	    30	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   GACATAAAACCAGGTAGACATATCAAAATAGCCAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACACAAGAGAGATTTTAAACTCTTGGTTACTTCAGCCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGCTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGTAATGTGGAATTTAAAAATGGATGCATTTTAGCCAATCTTGAAGGCAAGAAAGAAGGCTCTAGTGCGATTATAAATAATCTTAACAATAAAGCTGCCCTTATGGTGGTACCAAAAGAATGTGAAATGTTAGAAAATGAAAGTTTAGTGGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTTGCAACCTCCTTTTAGTGAAGTAATTAGCCCTAGCAGAGTTTCAATCCACTAGGG
# Right flank :  TAGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTATTTGAATTTCTTCATTATTTGAATTTTTATATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTGGTTTCGTTATTAACTTTTTCGTTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAATTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACACTAAATTGCAGCATAAAATAACCTAATTTTATAAGATTATTTCTAAATTTACTT

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:77.78%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.68   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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