Array 1 89363-93680 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMXB01000011.1 Thauera sp. 27 Cont11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 89363 32 100.0 34 ................................ TGGCGCTTCCATGCCGCCTTCTACGGTGTGCTGC 89429 32 100.0 34 ................................ ATCAAGACGGCGTGATGGCAGTGTTATCCGGCAG 89495 32 100.0 35 ................................ TCGGGCGCAACTCTGCCCACACGCGAAGCATGGCA 89562 32 100.0 35 ................................ AGAACTCCCTGAATGACGCTTTTGTTGTCATCGGC 89629 32 100.0 35 ................................ GCCCCGTTGATCGCTCAGTCGTACAGCCCGTAGCT 89696 32 100.0 36 ................................ GACGATCGGGTGTCCTTCGTGCTCACCCAGCGCATG 89764 32 100.0 35 ................................ GACTCGCTCTCGTTCACCGACGTGGGCAACGTATG 89831 32 100.0 35 ................................ GCTGACGCCGCTGTTTGTGCTGGCATCGGCAAACT 89898 32 100.0 33 ................................ GGTGGCGACCAGGTTGCCGCCGGCCGTCGGGGT 89963 32 100.0 35 ................................ CTCTGAGAACTGCGGCTTCACGAGGATGCCGTCGA 90030 32 100.0 35 ................................ CCTTCGGCTTTGGCGCGCTCGAGCGCGGTAGAGAC 90097 32 100.0 34 ................................ CAGCCGTTTGAGAGCAAGTGGCCCGAGGTCTCTG 90163 32 100.0 36 ................................ GGGCATAGCTTTAGCTCCAGTGTTGATGCCCAGGGC 90231 32 100.0 34 ................................ AACGTCTGGCGCGGGCCCAGACATGAGCGATGGG 90297 32 100.0 35 ................................ AAGTTCGACCTCAAATCTGCGGTCGTCATCGCCGT 90364 32 100.0 33 ................................ ATCGCCATCCGAGAAAGCACCGCAACGATGAGC 90429 32 100.0 35 ................................ TTCCTCGACTCGCTGCTCAAGTGCGGCATCGGTGA 90496 32 100.0 35 ................................ TGGTCGATCGGCTGGTGCTGGTGCGCCCGCTGACC 90563 32 100.0 34 ................................ TGCTTCATGCTTTCTGTATCTCCTTGAGCCTTGC 90629 32 100.0 36 ................................ CAGCTCCAGCAGGCGCAACCGCAGATCCGCGACCCC 90697 32 100.0 34 ................................ TCTACGCTATCGATGGCATCCTGCGCGGCTGGGC 90763 32 100.0 35 ................................ TTGTCCCACACGTAGGACACGCGCTGCCTGCGATT 90830 32 100.0 35 ................................ GAGGTTCGCGCAACTGGCGATGACGGCAGCGTCGA 90897 32 100.0 36 ................................ CGCGAGATCCCGGCTATCGAGCTGCGCCGCCAGCAT 90965 32 100.0 36 ................................ GCTGACAAGAAAGACCTCTTTGACGTTGACACGGCC 91033 32 100.0 34 ................................ ATGATGAGTTGCTCGCCCGCGTCGGTGCCAAGGT 91099 32 100.0 35 ................................ GGCGTGGGCGCCATCGACTACCGCGGCGCAGTCAC 91166 32 100.0 34 ................................ ATGGCCCGCACGCTCGAGGGGCGCCGCGCCCAGG 91232 32 100.0 35 ................................ AATGGGCATGTGCGCATCCGCAAGCCTAACACCCG 91299 32 100.0 34 ................................ CGGGGCCGGCACTGAGAAACTGATGGTGACGCGC 91365 32 100.0 37 ................................ CGCAAAAGTATCTGCGATGAGCAAACACCCCAACCGC 91434 32 100.0 35 ................................ ATCGCGCCGTCCTCACTGCCGCGGCCAGGGCCAGC 91501 32 100.0 34 ................................ TTCGTGCGGAACCCCAGGCGCCGCAGGATGGCCG 91567 32 100.0 35 ................................ GTCTCGTCGCGGCCATCGCCGACGCCAGCGCAACG 91634 32 100.0 35 ................................ ACCGCGCGCAATGCCGCTGCGGATCTCAAGCGCGA 91701 32 100.0 35 ................................ CAGATCCGCTGCCCGCACTGCGACGAGCCGCACGA 91768 32 100.0 34 ................................ GTTGTATAACTGGATTTAGGTTCCAGCGCCGCAA 91834 32 100.0 36 ................................ CACACCTGGCGCCCGATATAGATCGGGTTGCCGAGC 91902 32 100.0 34 ................................ CTCCCCCAGCTCCAGAGAGCGGATTGATTCCAAC 91968 32 100.0 36 ................................ TTGATGGCGCGGAAGGCTGCGCGGCGGCGGTCGAAT 92036 32 100.0 34 ................................ GCCGGCTCAAGTACGCGGGCGTGCGGGTGATCGG 92102 32 100.0 36 ................................ CGGCATCTGAATACGCTGAGTGGGTGGATGTGCCGC 92170 32 100.0 35 ................................ ATGCCAATCACGGCAACAGCGGAAGATGCACCCGA 92237 32 100.0 35 ................................ ACAGTACGCGAAGGGTTGGAACGACTGCCGAGCTG 92304 32 100.0 36 ................................ AGCGCGACGGTGGGCTAGAGATGGCGACGGGACTGC 92372 32 100.0 35 ................................ TTTGCGGTTCGCGCCTATCGCTTACCGTTGAATAT 92439 32 100.0 35 ................................ AGCCCGGCCGCTTCGCGCTTGGCGGATTCAAACTC 92506 32 100.0 35 ................................ AAGTGCAGATCCTGCCGGCGGATGCGCTCGACGTG 92573 32 100.0 35 ................................ TCCTCGATCTGGCGGCGCTTGGCTGGCGACTGGGG 92640 32 96.9 37 .G.............................. GAGAAGGGCAACTTCTCGCGCGTGACCAATGGCGACC 92709 32 100.0 34 ................................ TTCCGAGGAGCCGTACCTGCGGCAGTCCTGGTGG 92775 32 100.0 36 ................................ CGTGTCGAGTTGTTCGCGGGCGGCGCCCAGGTCGGC 92843 32 100.0 35 ................................ CACTCGCGCGTCCTGAGCTGGATCCCGGCTCAGCG 92910 32 100.0 35 ................................ GCGCCTGTCGCGCGACCACATCGAGAGCGCGCAGG 92977 32 100.0 35 ................................ TGGACCGAACTCGAAGACAAGGTGCAGCCCGCCGT 93044 32 100.0 36 ................................ TTCCGCAAATGCGCCAGGCGCGGCGTTGCCCGATGA 93112 32 100.0 35 ................................ CACGCGGAAAGCCGACAGATCATCACGCAACGACT 93179 32 100.0 34 ................................ AGCCGCTCGGCGGCCTGAATCTCCGCTTGTGACG 93245 32 100.0 34 ................................ GGCGCCGTGCCGTCCGCCGCCCCGGCCGCGGCCC 93311 32 100.0 35 ................................ TTGCGCCTCGCGGTACCGGCGCATCTGCTCCTCGG 93378 32 100.0 36 ................................ CGGGCGTCAGCCGCCGCGGGTGGCGGCCTGCAGCGC 93446 32 96.9 36 .....................C.......... CCGGCACCGGCGACCCGAAGAAAACGACGCGGTCAG 93514 32 100.0 35 ................................ GCGAAGCGGTAGCAGCCGCGGCGCACCTTCACGCG 93581 32 100.0 36 ................................ TGATCGGCAGCGGGGGTCGTATCGGTCAGATCCTGC 93649 32 96.9 0 ...................G............ | ========== ====== ====== ====== ================================ ===================================== ================== 65 32 99.9 35 GTCGCGCCCCGCGTGGGCGCGTGGATTGAAAC # Left flank : TCTCTGGAAGTAGGGCGCCATCATGATGGTTCTCGTCAGCTACGATGTCAGCACCACCAGCGCCAGCGGCCAGAAACGCCTGCGCCGGCTCGCCAAGGCGTGTCGCGACTACGGCCAGCGGGTGCAGTATTCCGTGTTCGAGATCGAGGTGGATTTCGCCCAGTGGACCTTTCTCAAGAGCAAACTGTGCGACCTGATCGACCCGGAGCAGGACAGCTTGCGCTTCTACTACCTTGGCAAGAACTGGCAGACCAAGGTCGAACACGTCGGCGCCAAAGCGGTGCTCGACCTGAACGGCCCGCTCATCCTCTGAGCTTCTGCGCGCGAACCTGTAGTGGCCGGCCAAACGTGGGCAGGTTCGCAAACCCCTGAAAGTCGATGGTTCTCTTGGAATTCGAATGCCGCGTGGAGCCATCTTTGCGTGTTCGAACTGCAATACCCCCAGGGTTCGCTGAGATCCGGTATTTTTCGTATTGTCTTCATGCCGTTGTGAGGACACA # Right flank : CGTGCGCGAGTGATAGGCACACCTTGGTCAGTGGGCGCCATCGATCGATGGAGGCGTATGGGTCGGATCAGGCCGCCTGAAGCTTCGATCTACTTGATTTCTCGAGCCTGTGGCCTCACTTACTGGAGTTGATAAAAATACGAATACCGCCAAGGAGTGGCTTGCACGTGCATGCGACCCCGATATCGACAACCGCATTCAAGGACGAGACATGAACGAGTCACTACACATCGTTTGCCCTCGCTGTAACAGCATCAATCGTGTCCCTGGCAGTCGGCTGCACGAGGCTCCCAGTTGCGGTCGTTGTCATCAGGCGCTGTTCGACGGTACACCGATCGCGCTAACGGAACAGTGCTTTGAGCGCCATATCGAGCGCACTGATCTGCCGGTATTGGTGGACTTCTGGGCGCCATGGTGTGGCCCATGCAAGGTGATGGCGCCTCAGTTCCAGCAGGCGGCGAGCGTACTCGAGCCAAAGGTGCGTCTGGTAAAGGTGAACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGCGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.30,-8.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //