Array 1 9794-9428 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBRW010000046.1 Acidaminococcus intestini strain MSK.17.8 DEKHBOKF_46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 9793 36 100.0 30 .................................... CGCTGTCGCTGACTCCGTTCTGGCGTCTGA 9727 36 100.0 30 .................................... ACTTGCCACGCAAGTTCCAGACTTCAACAT 9661 36 100.0 30 .................................... AAACATCGGACACAGAGCGCTTGGCCGCGT 9595 36 100.0 30 .................................... CGACGTTGACGTCAGCGATTTGCCTGACTG 9529 36 100.0 30 .................................... AATGAAAGTCAAAGGGCTCCCCAGGGCCCT 9463 36 91.7 0 ..............................CT..G. | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 98.6 30 GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC # Left flank : CCACGGTTTTGCCCTCC # Right flank : GTAAAATGTTTTTCGGTAGGGAAAAATAGTCCTTGCAGAATAAAAGGGAGGCCCCTATTGTTAAGATAGTGTTAACGGCACGAATATCAAAACAAAGGAAGGTCTCCCATGGAAAAGATTGTATCAGATGTCATCAAAATAATAAAAGGGTCTAAGAACGAAATTGAGATGGAAAAGGTCCTCTGGACCTTTCTCCTAAACACCGTTATCGCCATGATTGCCCTTGCCTTTGAGCGAATTAATGATGAGCTCTTTGCATCCCTCAAGGCAGAAGGATATAAGGTACAGCGCAAGGATGCACGCACCATTCAAGGTATCTTTGGTCCTTTGACCTACGAACGGAGGTTGGTGAAGAAGGAGGGAGAAAAGGCCTTCTATCCCCTTGATAGGCATCTGGGGTTTGAGCGCTACCGCAGGTACACGCCCTACCTTGAGTTCTGTGTGGTCAAGCTGGCTGCAAGGTCCGTCTACCGCGTTGTGGAAGAGTCCATCAAGATCCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 2-2996 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBRW010000047.1 Acidaminococcus intestini strain MSK.17.8 DEKHBOKF_47, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2 36 100.0 29 .................................... GGGAGGGCAAAACCGTGGATGACGCCGAC 67 36 100.0 30 .................................... TCGAACGTGAAGGTCAACGGCATAGCGTTC 133 36 100.0 29 .................................... TATTCAACAACAGCACCCTGAGTATGACA 198 36 100.0 29 .................................... GGCAAAAACTACACCGGAGATTATTATCA 263 36 100.0 29 .................................... GAGCATTATCAAAACTTACACAGCAGGAA 328 36 100.0 30 .................................... ACCGTCGGCGGCTTGTTCGTGGCCAGATTG 394 36 100.0 29 .................................... ACCTCCTAAAGGTCATTTTTGTGGTTAAG 459 36 100.0 30 .................................... TTTGTTGGCCCGACGGATCACGGGCAAGAT 525 36 100.0 30 .................................... GGATTCCATTAAACGCAACCTAGATTTTGA 591 36 100.0 30 .................................... CTCCACGTTCAGCAGTCGATGCGGAGCATG 657 36 100.0 30 .................................... ACCTCCACCCTTGCCGCCATTGCCTTTTTT 723 36 100.0 30 .................................... TAACCATTGCTCGTGGCTGACGGAAATCCT 789 36 100.0 30 .................................... CTACGTCCATTAATACCAGAGATGAAAATG 855 36 100.0 31 .................................... TCGTCATAAGGAACGATATATTCGGGGATAT 922 36 100.0 30 .................................... TTCATATTTCAAGGCTTTGAACATCGTTGA 988 36 100.0 30 .................................... TGAAGCTTCTGGAAGAATTCGCCAAACTGT 1054 36 100.0 29 .................................... AAATGTAGTAAAATTGGGAGAAGGTGAAG 1119 36 100.0 29 .................................... TCGACCGGCTCCTCGGGGGCGAGATTAAG 1184 36 100.0 30 .................................... ACATCGTCTGCTATGACGATATGATATTCC 1250 36 100.0 29 .................................... ACCCAGAAAAGCTTTCCGAAGGGCTTAAT 1315 36 100.0 30 .................................... GTCTCTGGGGCGAAACCGTCCAGTCCGACC 1381 36 100.0 30 .................................... GATGAGCTTTCGGATACGCTAATGAAAAAG 1447 36 100.0 30 .................................... TGTGATAGGCAGTAACACAGTGCTATACCC 1513 36 100.0 30 .................................... CTAATCTTGATTTTCGTCCCGGGCTGGATG 1579 36 100.0 30 .................................... GGGAGGGCAAAACCGTGGATGACGCCGACG 1645 36 100.0 30 .................................... TAATGTTGACCTCTTTGGCGAGGGTTTTGA 1711 36 100.0 30 .................................... CGGCCAACTTACCGGAGCTTCAGGAGCTTG 1777 36 100.0 30 .................................... ACTTAACGGCTTTTGAAGAGTATATGATCA 1843 36 100.0 29 .................................... ATGACGCCAAAGGGTTTGAAGTGGCCGGG 1908 36 100.0 30 .................................... AACGGGGCCTTACGAATCAGCAAATAGCCG 1974 36 100.0 30 .................................... GGAAACCAGCAAGCAGCAGCATCTCTCATC 2040 36 100.0 30 .................................... GCATTCAAGGCTCATCGAATGCCCTCCTAT 2106 36 100.0 29 .................................... TGCAAGGAGCATTAGTAACAAGCAGAGAA 2171 36 100.0 30 .................................... TAGCCAATCAGCGCCTTCGTCAGATAGTCC 2237 36 100.0 30 .................................... ACATCAGCCTGTATGAACAGGAGCTCAACT 2303 36 100.0 30 .................................... GCCATCAAGGGTGAGATCAGACCGACCAGC 2369 36 100.0 30 .................................... GACAGTATAAGGCAATCAAACAGTTTGTAA 2435 36 100.0 29 .................................... ACATGTCGTGATGCTAGCCAAGAATCCAG 2500 36 100.0 30 .................................... AAGTGGTAAAAGCAATGGGTATGAATGAAC 2566 36 100.0 30 .................................... AGTGTTATTATATTCTTTTCAGCTGCATTT 2632 36 100.0 30 .................................... ATTGCCGCCGGCAAGGCCATTACCATCGGC 2698 36 100.0 29 .................................... CCCATTTCCGCGATAGATTCTTTGACCCG 2763 36 100.0 30 .................................... CGCCAGCCATCCGACAAGGATTGCACAGCT 2829 36 100.0 30 .................................... GTATCGGTGTCAATGTCAATGCCGTATTCA 2895 36 97.2 30 ..............C..................... AAAGCTTGCTCCGCGACAGACGCTTGCGCA 2961 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 46 36 99.9 30 GTTTGATTATCCTTTGAATTTACATATCTCTCAAAC # Left flank : GG # Right flank : CCTCAAATTTGATCAACGGATTATCATTCCGTGTAGATAAATTCAAAAGGTGCTAATTTATAATACACATAAATCGTTATCTATAAGAACCCTCTTTTCCTGATGAAACAAGGGATATCGGCGGTTATCTATAAGCAAAAATTTAAGGTCATGAGCCAAGGCCGTATCCACAAAAAGCTGTATTTCTTCACTAGAAAGATAGCTTCGAAGATTGACTAGAATAAAGATTTTATCTCCTTCAAAGCGTGAAATAAGATCCATAAGAACAAAGATTTTTTCACCAAGTCCATTATAATCCAAATTAATAGTGATTCCCAAGGCTTTTAAGAGATTTCCAACCGTTAATTTTTCGCAATCTATTTCAAGATCTAGACTCATGGCGATTTCTTCCGCTAGGTGTTCCATTTGTGCTAACAGAATCTGTGTGTTTTCAAATAAAGGCCCATTTGTAGCTTGAAATTCCATTCTTTTTTGGATCTTCGTAAGAAGCATTTTGGGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATTATCCTTTGAATTTACATATCTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //