Array 1 838334-836911 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALWR01000001.1 Streptococcus parauberis KRS-02109 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 838333 36 100.0 30 .................................... AAGGCGCACTAGCTGGAGTCGCTAGGTCTG 838267 36 100.0 30 .................................... TGGTGGCGCAACATATGATTATGCAGCAGC 838201 36 100.0 30 .................................... GTTAATACCACCACGAATTGACCGCATTAA 838135 36 100.0 30 .................................... TCAACTATCGTACACTAAGCAAGGACAACA 838069 36 100.0 30 .................................... AACGAATTATCAGAGATTACCTAAAAGGGA 838003 36 100.0 31 .................................... CGCCAGATTCAAACGATGTGACTTTCTCTTT 837936 36 100.0 30 .................................... AAAAGTTAAAGAAAACATCATTGCATTGGT 837870 36 100.0 30 .................................... AGTTCTCAAAATATCAACCCACTTTGGCTC 837804 36 100.0 30 .................................... TCTGTTTTTTTAGATGTCACTACTGCGCCT 837738 36 100.0 29 .................................... TGATTTGACTATTTCAGAGTTAAAAACCT 837673 36 100.0 30 .................................... ATCGCCTAACAGATAAGATTTAGTAGCTTG 837607 36 100.0 30 .................................... CATTTGAGTTTGAGAATATCGATTATCAAG 837541 36 100.0 30 .................................... TAGAAATCCACGGATACGACCCAACAGAAT 837475 36 100.0 30 .................................... CATAATCTTCTTTTCAAGAATTGACATGCT 837409 36 100.0 30 .................................... CAAATAAAGTTTTACAATAATAAAAAAGTT 837343 36 100.0 31 .................................... CTTCTTCTTCAATCTCTGCAAAATAGGCTTC 837276 36 100.0 30 .................................... GGTGGAAAAAATGAACGAACCGGAATGGGT 837210 36 100.0 30 .................................... GTTGTCTGACTTAAGTAACATAATCAGCAA 837144 36 100.0 30 .................................... TATAAGATGTAGGAGCGGCATTTATGTTAG 837078 36 100.0 30 .................................... GGGGCATACAGTAGTTATCAAAGGTTTATC 837012 36 100.0 30 .................................... ACATCAAAGCACATCCTAATAACTATGTAT 836946 36 97.2 0 ..................................T. | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 99.9 30 GTTTTAGAGCTATGTTATTTTGAATGATTCCAAAAC # Left flank : AAAAACCAGAAGTTAAATCAATGGTCGATAAACTTGCTGCGACTATTACAGAACTAATTGCTTTTGAATGTTTGGAAAGTGAACTTGATTTGGAATATGATGAAATAACAGTACTCGAATTAATCAAAGCATTGGGTGTCAAATTTGAAACACAAAGTGACACAATTTTTGAAAAATGTCTTGAAATTCTACAGGTGTATAAATACTTAAACAAGAAAAAATTGCTCGTTTTTATCAATACCGGTTCCTACTTGAGCAAGGAAGAAGTAGAACAATTGTTTGAATACATCTCATTGTCGAATCAATCTGTTTTATTTTTAGAACCACGGAAATTATATGATTTTCCTCAATATATTTTAGATCAAGATTTCTTTCTTATGTCTCCTAAAGTGGTATAATAGTAGTAGAATGGATTCCCGAAATAGGTATCTTTCAAAGTTGAAGTCCTGCTAAGATGAGTAGCGCGATTACGAAATCTTTTGGAAAAATTATTCCACGAG # Right flank : CATTATGTTAATAAGTTTTTGTAGTCTTAGATTTGTTGTTTATTAAAGTCCTTTTTGCCTATTTTATGAGGTATCCACTTGCTTGATCTGCTTATCCAAATGATAGTCATTGCATTTTGTATTGTCTTTTTCCTTGGGACGATTCTTTTTGTCATTTTACTGGGTTGCGGTCCTTTGGGAAATCATTAAATTATCACTCAAGTGAAAGCTGTTATCATAAAGGCCATTTTTTATGAAAATGGCTTTTTGTATGGTTTTGGAAAATTTTTGTCATAATATCCAAACTAGGATTTTTTTTGAATATTTATTATGTTTTTTGGCTAGAATATAAATTTAAAAAGCACTATTTTCATTAATTTTCTTTGCAAAATTTCTGTAAAAAGCTTGTAAAATAAAGGCTTCTGGTTAATTAACAAATGATCCTAGTTTTTTCTTTGCAAGCCCTTACATATGTGCTATAATGAGAAAAAATAAGAGGAGATCTTCTAATGGAAAAAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTATTTTGAATGATTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //