Array 1 2263271-2260987 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045586.1 Lacticaseibacillus rhamnosus strain TK-F8B chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 2263270 36 100.0 30 .................................... TACCTCACGTTTTGACTGGTGGGTAGGCAA 2263204 36 100.0 30 .................................... CGTCTCGTCTTCCAATAGTGACAGTCCTTG 2263138 36 100.0 30 .................................... TGTAAGGTCCAACTATTCCCTTCTCCCTTC 2263072 36 100.0 30 .................................... GAATGTTGAGATCGATTTGCTTATAGATGA 2263006 36 100.0 30 .................................... GAGAAACAGTCCTGCCACTTTCAGAGCTTT 2262940 36 100.0 30 .................................... TCAAGCACAAAGAAAATGACCGCAACGAGT 2262874 36 100.0 30 .................................... GGACAGCATGTACAAGCAACCAAAAACTGG 2262808 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 2262742 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 2262676 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 2262608 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 2262542 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 2262476 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 2262410 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 2262344 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 2262278 36 100.0 30 .................................... CGGGCGAACGCAATGGTCTTCGCTGACAGC 2262212 36 100.0 30 .................................... AATAGCAACCGAAAGCGCTCCAGTGTCGCC 2262146 36 100.0 30 .................................... GTAGTGCATACCATCATCACGAGTGCCGTT 2262080 36 100.0 30 .................................... TGAACACGATGACGTAAAAGAAATGTATGT 2262014 36 100.0 30 .................................... GAATGTTTTACCATCGGAACGCGTGGTAAT 2261948 36 100.0 30 .................................... AATAGCCAAGTAAATACCGGCACGATTTAC 2261882 36 100.0 30 .................................... CAACATCAACAACAGCCGGCAATTGCTGCC 2261816 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 2261750 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 2261684 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 2261618 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 2261552 36 100.0 30 .................................... AAGTTCGGCCTCAACGGTGTACCACTTTCC 2261486 36 100.0 30 .................................... TGCTAATGATACCTATCCGGACTTGTTTCG 2261420 36 100.0 30 .................................... TACAAGGATGGCGGCAAGGTTTGGCAAGAC 2261354 36 100.0 30 .................................... CAATATTTTGCCCCTTGTTCCGTTGCGCCA 2261288 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 2261222 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 2261156 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 2261090 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 2261024 36 86.1 0 .......................AA.C....G...G | T,C [2260990,2260996] ========== ====== ====== ====== ==================================== ================================ ================== 35 36 99.6 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //