Array 1 180628-178320 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBEV01000002.1 Legionella pneumophila strain NMB002522 WA170380A-2-17_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 180627 28 100.0 32 ............................ AGTACTTGATTGTATATCCATCAAAGCTCGTT 180567 28 100.0 32 ............................ GGTCATTTTCCCCTATTGCTGGGTCTACTCCG 180507 28 100.0 32 ............................ CGTAACCCGGTGGAAGGTAGTCCCTTCATGGC 180447 28 100.0 32 ............................ TCAAGGCGGCACGCCATGTTGCCCCTCGGCAT 180387 28 100.0 32 ............................ AGATAAGTATCCTTGGACTCGTAGGAATGGTA 180327 28 100.0 32 ............................ AACTTACGTTTACCATTAGCAGTCAATTGAGC 180267 28 100.0 32 ............................ TTGGCTAAAAAGATTTTACGTAAGCGATCTGA 180207 28 100.0 32 ............................ ATTGACAGTCAGTTGAGCAGAACGAAAACCTT 180147 28 100.0 32 ............................ AGATAATCCTTCTGATTACGTCCTTTTGAGGC 180087 28 100.0 32 ............................ TACCATTAATAACAACAAAATCACCATTATAG 180027 28 100.0 32 ............................ TACTGGTGATGCTGCTACTGGTTCTAATTGGA 179967 28 100.0 32 ............................ TTATGGTTCACTTAATATTAAGCATTTTCAAG 179907 28 100.0 32 ............................ TGATAATCCTGCTGATTATGTCCTTTTGAGGC 179847 28 100.0 32 ............................ TCCAGTTGATAGAATTAAGGCTCTTGGTGATG 179787 28 100.0 32 ............................ ATCATACGTTGATATGATGTATTAGACATACG 179727 28 100.0 32 ............................ ACAAGCAAATTTGGCTGCTTTTGGTACTGCTA 179667 28 100.0 32 ............................ TCATTCAATTGGTGTTGCTATTGAGTTTTTAA 179607 28 100.0 32 ............................ CAAACAAGTCGATAAGGAACAGCAAAAAAGAA 179547 28 100.0 32 ............................ TCAAGATAAACAGAATCACCTTTCTGGTAAGA 179487 28 100.0 32 ............................ AACAAGCTCAGGAATTAAACCTGCTCTAACAA 179427 28 100.0 32 ............................ TTTTGGGGATTGTATGTCGGCAATTTATGGTA 179367 28 100.0 32 ............................ TTTCAATGACGTATACACACAAATATGGGCTA 179307 28 100.0 32 ............................ ATATACTAGGCCATCACCATATACTCGGCCAT 179247 28 100.0 32 ............................ AGCAAATATGAAACTAACACCAGAAAATTGCT 179187 28 100.0 32 ............................ CCAGTCAATAGCCTTAGCCGGCTTTCCATTGT 179127 28 100.0 32 ............................ TTATGGACGTTAAGGTTGTAAAGGTATTTTAG 179067 28 100.0 32 ............................ TAATGATTTATTAATGTTGTTAATCTCTTTAA 179007 28 100.0 32 ............................ TGTGATCAGCGATTATGAGGTAGTAGCAAAAA 178947 28 100.0 32 ............................ TTACGTTAGAGTAGTAAATGACGAGAATATAG 178887 28 100.0 32 ............................ AAGTACATCGTCAGCCTCAACTCCCTCTGTTA 178827 28 100.0 32 ............................ TAAAAGTGTCCTTAAATAAAAAGTAATTGTTT 178767 28 100.0 32 ............................ ATCTGTCACAACAATAATGGATGTTGCTGCAA 178707 28 100.0 32 ............................ AGTAAGAATAACGGAACGAATTTGTTTCCCGA 178647 28 100.0 32 ............................ TGAACAATCATTCCCCAAGGTTTTCGACTATC 178587 28 100.0 32 ............................ GCCAGCGAGTCTAACGATATAGAAAAATTAAA 178527 28 100.0 32 ............................ TATAAATTTAATACATAAGACAGTTAACCAGT 178467 28 100.0 32 ............................ GTTGGGCGTTGTTGGTACAACTGAGTCACCTA 178407 28 100.0 32 ............................ AAGCTTTTTTAAACTATTCTGTTGACGGGTAT 178347 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 39 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAG # Left flank : ATCCAAAATGAGGAGATTAGTTAAACGTGGTTCTATAACGGAAAGTGAGTTTCGACAATATAAAATTAAAATGTTTTCCAATGGTTTGGATTATCCATATGCTGAACTGGTAAGTAGTTCAAACGGAAAAAGATACCGCCGATATATTGAGTTTGGAGAGCTGCTCGATAAACCAATTTCTGGCGATTTTGATCAGTTTGGTCTTTCCAAAACTGCTACAGTTCCTTGGTTTGATTAGAAAAGAGGAATTGGCAAATCTATTGAATTTGATCAGTTTAAGAAGAGAATTTTGGCTAAGTCAAATATTTTAGTCTTTTATGGAATTAAAATAAAAAATAGTCTAGGCTTGGCTATTCTCAACTTCCAAATACTAATAATTTTGGTTCCTTAAAAATTTGTTTTAAAATCAGATGATTATAACTTGATTGAAATACATTGGGTGACAGAGTAGTTTGCATATAACTTTCTGTTTTTTCTGTTTTTTTATAGTTTATAATCGA # Right flank : TATCTGCACCGTACAGCAAGCGTAGGTCGGGCCAAGGCCCATAGCCGTCAAGCTAAGGAGAACACATCAAAAATTTTCTGCATTAAAAAGGGGGGCACAGTTCTTAATTTTAGTATCTTTGTTAGCGAAAAGAGCCAAGCTGTCATGGAAACTCTTAAAGAAAGTGTTTTAAACGGTAAGGAGAATTCCAAGCTCGAACAAAATCGTTGAGTTTGGTTATTAACAATTTACACGCCTTATAAAAGGAAACTTCTCTATTATTTTGGTATCGAACCGGGGCGCATAGTAAAAATAAAAACATCATCCCAATAAACTTGCCATAGGTCTCGATGACTACGCGTGCGGATTTTGTAGTACAAATACAATCAATATGCATTAATGATTTACTTAGTTTAAAGACTAATTCAATTTGCCATCGCCAAGAATAACACTTGCATATCTCCTCATTGCCTATTTGTGTTTCAGATGTGTTGGTAATATAAATGGACCAATCTTGTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //