Array 1 35173-37066 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKQV01000002.1 Acidithiobacillus ferriphilus strain SCUT-1 CODE_12_leth_64519_cov_472.103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 35173 37 100.0 34 ..................................... TGAATCGTCGTAGACGGTGGTAAAGCTGCCCCAG 35244 37 100.0 34 ..................................... CAGACAGTGACCCAGTGGGGCGCACTGGAATTAG 35315 37 100.0 34 ..................................... TCATCGCTGCCCCAGGCCACGGTGGAGAACGCTT 35386 37 100.0 34 ..................................... CGGCTACAGGGGGGAGCCAGCGCGGTAATCCTAG 35457 37 100.0 33 ..................................... ACCAGTGAGTAACCCGGACATCCTCCTTGGGGT 35527 37 100.0 34 ..................................... TAGAACATCCTGCTGACTCGCACGCCTGGGCTCA 35598 37 100.0 34 ..................................... AACCTCATCAAGCACTACAACAAGCTCCAAAAGC 35669 37 100.0 33 ..................................... CTGGGCGAGCTGTACTACGACAACGCCAAAGGC 35739 37 100.0 34 ..................................... GTCCATCGGCGGGTATCCCAAGTCTGCCATCCTG 35810 37 100.0 34 ..................................... TTCCGTTTGTTTTGGCGAGTTTTCCTCGTGTGCC 35881 37 100.0 39 ..................................... TTGCTGGCGTTACTGCGCCCACCTTTGGCCCTCTGCCAT 35957 37 100.0 36 ..................................... ATCTTCTCCATGGCCGAAATCGTCACGCAAAAATTG 36030 37 100.0 35 ..................................... ATATATCTCCGAGTATGCCGCGAGCTCGACCAAGT 36102 37 100.0 34 ..................................... TTTCATAAGCTTTATAAAAGTCAAGCCACCACTG 36173 37 100.0 33 ..................................... TCCCATCCAGTTCTGCACTCTGCATCGCACCAC 36243 37 100.0 35 ..................................... AACCCACTCATCTAACATCACCATATAGCAAATGG 36315 37 100.0 37 ..................................... GGAATCAGCAAGGATTATGGCTATTGAGCTTGAACAT 36389 37 100.0 34 ..................................... ATGATAAGCGCTGGATAAAGCCCTGTCAAACCGT 36460 37 100.0 33 ..................................... ATCTTCCCAGAAAGTTTAGGAAGTTTTTTCCGC 36530 37 100.0 34 ..................................... CTCAACAAATCCCGGCAATGTGCAGCAAAATGGT 36601 37 100.0 34 ..................................... AGGAGGGTAAAGGTCCCGTCCCTGCTCATGTTGA 36672 37 100.0 35 ..................................... AAAATATTACCGCGGGATTGCCATCAGTCGCGCAG 36744 37 100.0 36 ..................................... CGCGGCCAGCCACGGCTAACAAATGACAACCCCAGC 36817 37 100.0 34 ..................................... GAATATCACGTGATTAGAAACACTACTGATTATG 36888 37 100.0 35 ..................................... GCGGAACCAGCGGTCATGTTCGGCGGCCGCAAAGG 36960 37 100.0 33 ..................................... CCACAGGCTATACTTACGGTCACCTTCGGGTGG 37030 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 27 37 100.0 34 GTATCGCCCGGCTTATAAACCGGGCGTGGATTGAAAC # Left flank : GCCGTACCTGAGCCGTTGAGGAGGCGTAATCATGCTCATCATCGTCACTTACGATGTCTCTACCGAAACGGCGGCGGGGCGCAAGCGCCTGCGCCGCGTGGCCAAAGCCTGCGAACGGGTTGGTCAGCGTGTGCAGAAATCTGTTTTTGAATGTCAGGTCAATCAAATGCAGTACGAGGCTTTTGAGCGCACGCTGCTGGCGGAAATAGACGAAACAGTGGATAATCTCCGCTTCTATCGCCTCACAGAACCCACCGAACTGCGCATCAAGCAATATGGAACCTTCCGATCTATCGACTTTAATGGTCCTCTCATGGTTTGATGCGCGAACCCGGATCGGCGTCTCAAAGCCCGTCCTTTCGCGCACCGCGTATCTTATTGTTATATCATCGTTTTTATTAGAAGTCCTTGGGGTCCGTATAGATTTTCAGGCGACTCTATCTGCCATTCGCGGCATGTACAAAGAAAAATGTTCATTAACAATCTGTTGCAACAATGCG # Right flank : CATCGTGCAGGGCGCGACCGCTGAAGATGCCGATGATGTATCGCCCGGCTTGTTAGATTACGAACAGCAAGTCCAGAGAAATGCAATCATGGTACACCGTTCCTCCTAAAGCTGATGACGGTAAGTTTCCCAAACATTTATTTAGTCGAGGTAGACATCGACATCGTGCTCGCGGTGGTCATCCATGAGCGGAATCCTGTCTTGCGGCAATTCAGTGTCATCCAGGGTAATGCGCACTACCCGCGCTGATGCGGTGCTATCAGCATGGACGGTGATATGATACAGCGTGTCGCGGTAGCGGTAGTGGACCTTGTAGGATTTCCAGTCCGCCGGGACGCGGGGCGTGATGCGCAGGTGATCGACCTCAAGCGATAGGCCCAGCAAGGTTTCGATCGTTAATCGATACATCCAGCCCGCTGCGCCGGTGTACCAGGTCCAGCCACCACGCCCGACGTGTGGTGCGGCGCCATAAATATCGGCGCAGATAACGTAGGGTTCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCGCCCGGCTTATAAACCGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.70,-14.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : NA //