Array 1 25366-25758 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BDBM01000061.1 Nocardia gamkensis NBRC 108242, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=====================================	===================================	==================
     25366	    37	 100.0	    34	.....................................	GGCACCGCCTGGCCCAGCGCGCTCCAGGCGTCAC 	
     25437	    36	  94.6	    34	............-....A...................	ATCCAGGAGCACACCTTGGCGACAGCCACCGACT 	
     25507	    37	  91.9	    34	.................A..A.....G..........	TCGAGGGTCATGGTCGACGAGTGGGGCACCTGGG 	
     25578	    37	  94.6	    35	A..................A.................	AACCAGTTGATCTTGCAGGGCAATGCGATCGTCTT	
     25650	    37	 100.0	    35	.....................................	GACCCCTGGCGCGACCCGACGATCCGATACCCCGA	
     25722	    37	  94.6	     0	.........A......................A....	|                                  	
==========	======	======	======	=====================================	===================================	==================
         6	    37	  96.0	    35	GTGGCGGTCGCCCTCACGGGCGGCCGAGGATCGCAAC	                                   	       

# Left flank :   TGGCATCGGACACTTCAGCGCACCCCTGGCCACCCGCACCGGTGTCACCACCGACGACCTCGCCCTGCTCTGGCGCTGCATGACCCTGATGTTCGAACACGACCGCGCCTCCACCCGAGGCGAAATGACCCTGCGCGGCCTCTACATCTTCACCCACCACGACGCCTACGGAACCACACCCGCCCACACCCTCACCGACACCGTCCACATCACCCCCGACACCCGCCAAACCCCGACCACCCCCATCCGCAGCTTCACCGACTACACCATCACCATCGACGAAGCCGCCATCCCCGACGGCGTCACACTCACCAGAATCGTCGGATAACCCTGGCGACCCGCCGATGAACACATCGCAGGCGTTCCCACAGTCAAGAACCCCCCAGCGCACACCGATTCCCAAGGAGGTTCCGAACTGACGAACAGCAGTTATGGAATCCGAGGCGCCCCAAACAGACTCCATCGCGGGGCCTGGTCGACGTTCGCCCAGTTCGCGCACC
# Right flank :  CCCGATGACCTCGGCCGCGACGTTCGGTGTCATCCCTGTGTCATCCCCGTGGCAGTCGCCCTTACCGCTCGAGGCTGTGGGCTGCTGTCACTGTGACCGAGCCGGGACGGTTTCAGGGGTGACGGGCCGCCCGGCTTTCTGTCTGGAGGGGTGTCTGCGGGTGGGAATTAGACGAGCCCGGACGGTGGTGGCGTCCGGGCTCGTTCTGTCGCGGTTGCGGTTACCGGTCGGCGACTCGGCGTAGGTATTCGCGGATCAGCTCGGCTAGCCGTCGGTCCAGTTCGTCCACCGCACGCGCGGGCCGACACGCGTCCGGTGTTGACGCCGCCCTGTATTCGGTGCCAAGTACCACCAGCGCACGTTCACGCGGGCGACACGGCAGCGGGCAGTGGTGGTGGACGCTGAGGGTGCGGATCGCGTCGTCGGGACTGAGGTCGCCGGGATCGACCGCGCAATCGGTGTCGGCGATGTTGCTGTGCTGGGCCGCGGGCAGTGTGGTG

# Questionable array : NO	 Score: 5.75
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGGCGGTCGCCCTCACGGGCGGCCGAGGATCGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-16.90,-13.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [19-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.24,0.41   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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