Array 1 41358-39666 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCDV01000005.1 Moorella thermoacetica strain ATCC 31490 MOLA_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 41357 37 100.0 35 ..................................... CGTATAGCCGAAAGGCTTGCACAGCCTGGCGTATC 41285 37 100.0 35 ..................................... CTGTCCTGATTAGACCTTTGGTAAGACCGTCTAAT 41213 37 100.0 35 ..................................... CGAAAAATTTTTTGAGGATTTTTTTCGGGCGAGAG 41141 37 100.0 34 ..................................... ACTCGTTCGCCACTCTTTCAAATGGCGAACAAAT 41070 37 100.0 35 ..................................... TGGAAATGTGGTATAATTTAAGCAGGTGAAGGTGC 40998 37 100.0 35 ..................................... AACATATTCTTGGACTTGATCGGATATGGATCTAC 40926 37 100.0 35 ..................................... TGGATGGCAAGGAATATAAGGCCCCGAAGCCGAAA 40854 37 100.0 34 ..................................... TGACGGTGCTTTTAACCCTTCGTCTGATACGCAA 40783 37 100.0 35 ..................................... TGCAGGGCCGGAAGCTAGAGGACCACCGGAAGGTC 40711 37 100.0 35 ..................................... ATCTTGTATCATCTCAATCGTTTTGCCAAATAGCC 40639 37 100.0 36 ..................................... CGAATCCGAATACGGGGGCATATGCTGCCTATTGTC 40566 37 100.0 34 ..................................... TTTCTATAGTCCGCAGCGGAGCCGAAATTCGGTC 40495 37 100.0 36 ..................................... AATGTCTACATATACCTGTCCTGACTCGCCAATGAC 40422 37 100.0 35 ..................................... ATCGATCACGGCCATATGGGGGTTCAGGCCGTCAA 40350 37 100.0 35 ..................................... AGCACAAAATAATCATTTTCATAAACCTCGTGGGC 40278 37 100.0 35 ..................................... TCTGCGCTGCCATTAACGGCTACCTGGAGGGCCTA 40206 37 100.0 34 ..................................... AACCACTAAGTAAGCTTTGCCATCCAACAGAATC 40135 37 100.0 36 ..................................... CCTGGTCGCGCAGGAAACGCAAAACAAAAATCTCAT 40062 37 100.0 35 ..................................... CACAAGGGCCTTGATAGCGACATCAGCGCTAATAC 39990 37 100.0 35 ..................................... CTTTTGTGTCTCTTCCAAGGGCACAGGATAAATCA 39918 37 100.0 35 ..................................... CGTTTAAGCCCCATCTCTGCCGCTTTGTTGTGCAC 39846 37 100.0 35 ..................................... CTGCGAAGTGCCGGAGGGGTTTACTTTGACCAGCC 39774 37 100.0 35 ..................................... CTAACATCAGCCATGGCAGACTCAAAATCCATAGC 39702 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 24 37 100.0 35 GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Left flank : CGGTAAATATATCGCTTTTCTTAAGTGGTGTAGATAACATGTATATTTTAATTACTTATGATGTTTCTACAGAAACAGAGGCAGGTAAAAAACGCCTGCGTAAAGTTGCCCAGGTATGTAAAGATTTTGGTCAGAGGGTGCAAAAGTCCGTCTTTGAGTGTTCGGTCAACGAAGCCCAGTTTGAACAGTTAAAGCACCGGCTCTTGCAGTGTATCGATGAAAAAAGCGATAGCCTGCGGATTTATCGACTGCGCGAATCCGCGAAAAAATACATCCAGGAGTATGGCGTCAACCTTACGATTGATTTTGACGCCCCCCTGGTTTTGTAAACCCGCGAACATATAGCAAGGGGCAAAAGGCCGAAAGGTTCGCGTTCTTTGGCGAATCAAGACCTGAAGCTAATTTTAGAGGTGAAGCATAATGAAGTATTCTAATTTAGTCATCAGGTTCGCGCAGAGTAGTAATATAGGGGTTGTCCGCCAAGGGTTTTAGCGCGAAGT # Right flank : AGGACGGCATCAACGGCGTAGCTTGGGTAGATGAGTTATGCCCGGCTATTACGCCCAGCTTACATTGATCGCAATGCTCTCCTGCTCCACCCATTTGCGGTGCTTCAGCATGGCCTGCAGGAGGGGGTGCCAGGGGGCGTAAGCCGGGTCCTCAGCCAAGTGCCGGAGCCTGGCGGCATACTCGTCGCCGAAGGGTATTCCGGCCGGCAAATACCTGGTATAAGTAGTGACATCCATAAGGTAGGGCTGCAAATCGGGAATTAAGTTGCGGCGGATATATTCGCAAATGCGGATGCCGCCGTAGTCCATATCGCCCCAGTGGTAGACCGGGGGCCTGGCGGTGGCTCCAGGGGATTCCCGGTAATCCTGGAGCCGGCGTAAAAAAAGCTGCACGCCGCGGTGGGGGAAGCCGCCGGTATATACTACTAAGCCAGCAGGGCCCTCAACCGCTAAACCCCGGCCCCCTCCCCCTTCCCGGCAAGGTACAGCCAGCTCACTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.30,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 379179-382198 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCDV01000002.1 Moorella thermoacetica strain ATCC 31490 MOLA_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 379179 29 100.0 36 ............................. CTGCGGTAAAAGTAGTACTATAATCAACAGCAGATT 379244 29 100.0 35 ............................. ATAATCTACAATTATTCCTTCCTTTTCGGCCAGCC 379308 29 100.0 36 ............................. GGGAGATTTTCAAAGTCTCGACGTTATGCTCTACGT 379373 29 100.0 35 ............................. AAACTCCACCGTCCCCTCCTGCGGGTCTAGCACCC 379437 29 100.0 36 ............................. TTTGCCCTTGCGCCCTTGAGTTTTCTGCCCGTCGAA 379502 29 100.0 37 ............................. TTTAAGCTTATCAACAGCCCCGCAGGCAATGGCGACC 379568 29 100.0 37 ............................. TACTTACCCGAAGGTCATTGGCCGCGGTGGTATCAGG 379634 29 100.0 36 ............................. TCGACCGCCTGAAGTCAATTCTCTACGCCAGTAGCG 379699 29 100.0 36 ............................. CCCGCTCTCCCGAAACCCTGACCATCCCCACGGCAG 379764 29 100.0 36 ............................. TCGGAGATTGCTGTATTTGTAAATGGGGCAAAAGAG 379829 29 100.0 34 ............................. GGGTCGTCTTTACCGGTCCGTTAGCCTGCTCCGG 379892 29 100.0 36 ............................. ATCCCCAGGAAGAACGGCTGCTGGCCGATCCTGTTT 379957 29 100.0 37 ............................. AGCTTTTCAATGGATGGATTGCATCGACCGTGTTCAA 380023 29 100.0 35 ............................. TTCTTTTATAGCGGATATTGAAGCTGGACGTAGCA 380087 29 100.0 36 ............................. TAGCGATGACGGAATAGCCCCGTAAACCGTCGAAGC 380152 29 100.0 35 ............................. CCCGATAACGCGGAATGAGTGCCGCGAGTGTGCCA 380216 29 100.0 34 ............................. TGTTAAGGGGCACAAAGTGTTTGTCCCCTTCCGG 380279 29 100.0 37 ............................. GGTTTATAAGCATAAGTTTCCGTGCCGTGGGCCGAAG 380345 29 100.0 36 ............................. AATGGATCGTCTGGCATGGTGAAGAAGAGTACGGCA 380410 29 100.0 37 ............................. TGCGGCATATCAAGCAAAAGAAGTCGATTTACGAAGA 380476 29 100.0 37 ............................. AAGAAACCGGCGACAAATAAGCCGGTTTTCTTTTTGC 380542 29 100.0 35 ............................. TATAAACATCAATTAAATCCGCATCAAGCATTTTA 380606 29 100.0 37 ............................. TCCGGCTCGGAGCCAGGTGGTTTCTTCCGTGACAGGG 380672 29 100.0 35 ............................. TCCTTTTACTGATGACCCTGAAGGCAATATGAAGA 380736 29 100.0 35 ............................. TTACTCACCGAGGTTTCCAGTCGGGGCGACAACCG 380800 29 100.0 36 ............................. TTACGGGGCGTAGGCGGAGAGCCGAAATTCATAAAG 380865 29 100.0 36 ............................. CAAGCTCTCGGAGCTCTTCTCTCAACATTCCCACCC 380930 29 100.0 36 ............................. CTACCAGATCGCTTGAATTCGGAGAAGGTCTTTATT 380995 29 100.0 37 ............................. CTTTTCGTCCAGGTGGTCCAGGCGGCAGGCGTCTTCG 381061 29 100.0 38 ............................. TTCGGGCAGGGAATAAAATATTTCTGCCGGCAAATCTC 381128 29 100.0 35 ............................. CGCTCATGTAGAGGTACTTTTCAAACCCGTTGAGT 381192 29 100.0 35 ............................. CGTCCCAAGCCGCTCCATACGCCACCGGGGTACCC 381256 29 100.0 37 ............................. TACATTGAGCCACCCAGGCATCACGTTCCCTGGGTGA 381322 29 100.0 36 ............................. TCATAACAGTAACCTTCCCTGTAGAGGAATTAAACT 381387 29 100.0 37 ............................. CTTTTCGTCCAGGTGGTCCAGGCGGCAGGCGTCTTCG 381453 29 100.0 38 ............................. TTCGGGCAGGGAATAAAATATTTCTGCCGGCAAATCTC 381520 29 100.0 35 ............................. CGCTCATGTAGAGGTACTTTTCAAACCCGTTGAGT 381584 29 100.0 35 ............................. CGTCCCAAGCCGCTCCATACGCCACCGGGGTACCC 381648 29 100.0 37 ............................. TACATTGAGCCACCCAGGCATCACGTTCCCTGGGTGA 381714 29 100.0 36 ............................. TCATAACAGTAACCTTCCCTGTAGAGGAATTAAACT 381779 29 100.0 36 ............................. CTGGCTCACCGTAATGCGGTATTTGGGTAACTGCAC 381844 29 100.0 36 ............................. TTAGATATAATAGGTTAAAAAGCACTGGAATATTAG 381909 29 100.0 35 ............................. TTTTAATCCCGCCTCTTTCAGTTTTACGGCCATTT 381973 29 100.0 36 ............................. CTGAAGCAATCCCAGGTCCTCATCGGCAAAAACTGG 382038 29 96.6 37 ........T.................... TACCGGGGGCCTTGCTGCGCATAAAAGTCCAACTACG 382104 29 100.0 37 ............................. GGCAGTTGATCAAAACTATCCACGGCCACCTGGCAGA 382170 29 96.6 0 ....T........................ | ========== ====== ====== ====== ============================= ====================================== ================== 47 29 99.9 36 GTGACCATCGACCATAGAGGAATTTGAAC # Left flank : CTGGAAAAGACGATTTTGCACCGCAAGCTAAAAAGGAATATTCGCTATAAAAGTCTTGTCCGGTTAGACTTATATAAGCTTATAAAGCACCTCCTTGGTGAAGAAAAATATTCCCCCATGAAGGTGTGGTGGTAAATATAAGAGTGATCCTGATCTATGATATTAATACTGAAGACAACGACGGCAAACGGCGCCTGGTAAAGATCATGAAGACCAGCCGTAAATATTTATCTCATGTGCAAAAATCCGTTTTTGAAGGAGATATTACCGAAGGGCAAATATCCTTACTTAAGAAGGAAATAATGGCCATAGTTAACATGAAAAAAGACTTTGTCATCATTTATAGCCTCAGGGATGGAGTAAAGCTAAACCGTGAAATCTTGACTGACACCCCCGACCCTACAGATAATTTCCTGTAGTGTAAGTGCAAACTGGCGGTTTGACGCAGGGGCTTTTAAAAAATTGCTAAAATCCCTGTCGGGACAAGCCTTTCATCTGCG # Right flank : CAGGGTGGAGATAAAAATCTGGTGATAACGTCAAAGGTGGAGTAGTAATCGGGCTGGGTACCCGGTTGCAAGTTTTTCAGCAAGAAATGGTGCGACGTATAACTGGTGATAGCGATATAGACTTAACGTTACCAGGTAAGGGAAAGTGTGCTTACTTCATCATCACTCCAGATACCCATGGCGCCTTTGATTTTCTGGCTTCATTGCTGTTCACCTTTTTATTCGTTCGGTTGGTAGAGGTTGCTGATACCTCTCCCAATGGCCGTTTACCGGTGCAGGTTAGTTTTCTTCTGGATGAGTTCGCCAATATCGTAAGTATTCCGGAGTTTGAAAAGAAAATCGCCACCGTCCAGAGCCTAAGACTGAAGACGAACTTAACGATGGCGGAAATCAGGATTACCATGATACTAAGGACCAGAAACCTCTAGAAGAAGGGGCAGAAGAGGTGACGGAAGAAAATATAAAAGAGGGAGATAGGGTTATAGAGATAGAAAACAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCATCGACCATAGAGGAATTTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //