Array 1 60579-59464 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHUM010000005.1 Enterobacter mori strain 020047R contig00005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 60578 28 100.0 32 ............................ TTTTGTAAAATGGGATAACTACTTTATTTCCA 60518 28 100.0 33 ............................ ATAGCTTCCGGCGTAACTGCCACCACTCTTTCA 60457 28 100.0 32 ............................ AGTACGATGCTGGATACACGCAGGCGCAGGCA 60397 28 100.0 33 ............................ ATAAAAGAGCAGCGCAGAAAAATTGCCCGTCGT 60336 28 100.0 32 ............................ TTTTTGTCTTTTTCCCCGCGATGAATACCGAC 60276 28 100.0 33 ............................ CATATATAGAATTTAATAAAACTTTAGAAACAT 60215 28 100.0 32 ............................ AGCCAGCGATGGAAGATGTTCTGCTGGTTGTT 60155 28 100.0 33 ............................ GTTATGGCCGCCCGATAGCGTATTACTTTACGA 60094 28 100.0 32 ............................ GAAAGAGCCGGAAACACTCAAAGTAAAATATC 60034 28 100.0 33 ............................ GGACGCATGTAGCGTGTGCGAGTGCGCTCCGTC 59973 28 100.0 32 ............................ CGGACGCACCGGAAACCAGCCCACCCATATCA 59913 28 100.0 32 ............................ ACAGCTGCGCTTCCATCATCTTGAGCGGCCCC 59853 28 96.4 32 ....T....................... ATTTTTTCACCAGATTCCCCGAACCGAGCAGG 59793 28 96.4 32 .......A.................... AGCTTCTTTTTCGGGTCTTTGCGGTCCCTCAC 59733 28 100.0 32 ............................ CTTAATTCTATCTCCGTATCGTCATTGTAATA 59673 28 100.0 32 ............................ AAAATCAAAAGCCACGGAGCGTGCAATTGCGC 59613 28 100.0 32 ............................ GGATAAAGTAAAACCCGCGAGGTGCGGGTTTG 59553 28 85.7 32 ..A..........G...T......A... CTCTGCCATTACGCACTGATGCGAGCGAACTC A [59548] 59492 28 85.7 0 A.C........C...C............ | C [59467] ========== ====== ====== ====== ============================ ================================= ================== 19 28 98.1 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGAAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGTGTCCGTCCCGCGCTTTTACGGCGGGCCACGTTACGTTCGTTAATCCCGGTGACGCGCAAAATGTCCGCTTTAGACATCGCCGTCCATTCATGAATATTGTCGAGGACGCTGACGGGTAAGCCCTGATTGAGAAATTCAATCAGTCGCATACCGCGGTTTGCGGGTAAACCGGCGTAGCGCCAAAGCGCGTTATCAGCAGGTCTCTGCGCGGGGATCCATGTTCTCATGTTTCCTCCTGAGTAATGTCATTTGTCATGGTTAATTATAGTCATTTGTCAGGGGGAGGGGAATGAGTGTTTTGTATGCAGGGGGAAGAGAAGAGGGCATTTGACCCTAATTTTTAGTGTGTTCGTAATATATTGATTTTAAATGGATATTTTGAGTGGGTAAAAAAGAGGGTAAAAGAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGGGATATTATTCCA # Right flank : ATAGAAAATAAGGTCTCATCCCCCTTACTCTCCACACTGTCGAACAGACAGCCCGGAAGCTGAACCGAACCGTCAAATAATTGTTCAAATAATCAACTGCGCCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCAGCGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 70697-70066 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHUM010000005.1 Enterobacter mori strain 020047R contig00005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 70696 28 100.0 32 ............................ TGCTGCTGCACGACGGTATCGCGACGCACAGC 70636 28 100.0 32 ............................ TTTGCCATACCCTGCGCGGTGTACATGCGATA 70576 28 100.0 32 ............................ AAAACGGAAAGAATAATCGCTTTATATATGCT 70516 28 100.0 33 ............................ ATCAAACCGGTAACGCATGCGCCATACCTTTTT 70455 28 100.0 32 ............................ AATGACACTACTGAAGGTCATCAGGCTATTCG 70395 28 100.0 32 ............................ GGATGCAGTCTAAAATTTCCCCTCTTCACTTC 70335 28 100.0 33 ............................ AGAATGAGACACAGTAAGCGCGCGGAGGTGATC 70274 28 100.0 32 ............................ GATTATCGTTTCCAGTTGCGTGACGCTTATTT 70214 28 100.0 33 ............................ GTTCCGCCGTAAGGGTGCTGACCTTTCGGACAG 70153 28 100.0 32 ............................ ATCGAAACGAAACATCTACAGCTGAGCGAAGT 70093 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 11 28 98.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAAAGGTGAAAACCAGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGCGGAACAGCCGCGACAAAAAGAGTGGTTGCTTGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCGATGGCCGCGGATGTCGTTGCACCTCAACGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCAATGCGAGGCGTCGGGGGTGTTCCTCTGACGTCATTGGTTTATACCCTTTTTTCTGATGTTCACGTAACGTATTGATTTATATGGTGCGTATTTACGTTCCAGAAAAAAGGGTTTTATGCGTAAAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AAACTATCCTTCGAAAACATTCACCTTACCTATTTAAACCTTAATACCATCAAACCCGCACTCTCTATTTTTCACAATAAATAAAAAATTCATTCACGCATAAATTATATTCTAACGAATATATTATTCGTAAAAATAATGCATTAAATGATAAAGTAATTTTTCGCTTTATTATCATGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTCCGATAACATACCGCGCATTCAACATCTTGAAATAAAATCCCTTGCTATGTCCGTAAACAGCATCACCCCTACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGTCGCATCCAGGTTAATGGCGGACGCGTTGAATATGTCACCCAGGAAGGCAAAGAGTCGTTTTACTGGAATATTCCCATCGCCAATACGACAGCGGTAATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAGT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //