Array 1 443552-441820 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGI01000003.1 Eisenbergiella tayi strain NML 120489 BEH84_contig000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 443551 30 100.0 36 .............................. TTACTCAGCTGGTACCCATTGTATGCCGCTGTCACC 443485 30 100.0 35 .............................. AGTTATAATTTTATAACTACACCAATTGGTATTAT 443420 30 100.0 36 .............................. TACAATCTTATACTTGATGAAGGTCCTGGAAATACC 443354 30 100.0 34 .............................. AGAAAAAAACAGACCGTTTTTAGTCTGTTTTTAG 443290 30 96.7 35 ....G......................... CACCAACATTCATTTATAAAAACCTCCTTGAAAAC 443225 30 100.0 36 .............................. AGCTTTTTATACCCACTTCCCTGCAATCTGGTTTTC 443159 30 100.0 35 .............................. ACGGACTGTTCGGAACTTCTGGTGTGGTGGCCCTG 443094 30 100.0 35 .............................. GTCGAATATTCAGGTGCTTGTTACGGGAATAGCTG 443029 30 100.0 37 .............................. TATTTAGCGTCTATAACAAGGGCGGCCAGATTCCCTA 442962 30 100.0 36 .............................. AATGCCATGCCGGAGTTAAAGAGGCTTGATATTGCC 442896 30 100.0 35 .............................. TAATACACCGACACCAGGGATGCATGGGGGGATAA 442831 30 100.0 36 .............................. GTTCCGGTTCCGGACCATTTTCTATCTCATTGTCTG 442765 30 100.0 36 .............................. CTTATAGCCTGCCGTATAACCTCTATTCCATAATGT 442699 30 100.0 36 .............................. ATTTGTGCTTAATGGAAGGACAGGACAGGTAACGGC 442633 30 100.0 34 .............................. TGGCAGCAGGTAAATGTAAAGCGGCATATTATAC 442569 30 100.0 36 .............................. CCCTGACTGAGCATGACCAGACAAGCCTTGTTGGTC 442503 30 100.0 37 .............................. TTAAGGTAATACTCTATGTCTGTTGGCTCTACATTTC 442436 30 100.0 38 .............................. CGGTGACGAATGAGGAATTCCAGAAAGATTCCCGGAAA 442368 30 100.0 36 .............................. ATGAACAGGGAATATGTTGGGACGGCAGAGCTGAAT 442302 30 100.0 35 .............................. TGACGATTAATGGATGAGCTTGTAAGTTTGAGACT 442237 30 100.0 36 .............................. TGTGCCGGATCTGTATATTTGGCTTACACGCCAAAT 442171 30 100.0 34 .............................. GATGGAGCGAGAAATAGGATGCAAAGCCTTCCGG 442107 30 100.0 34 .............................. TTTCTAAAATGAACAAGATTTTGATTTCGCTTCT 442043 30 100.0 35 .............................. TCTCTGAAGTGTCATAAGTATCATAATTCCTATCA 441978 30 100.0 35 .............................. ATATTAAGTATCTGGCGGGCCAGGAACGGCCCGGA 441913 30 100.0 34 .............................. TTACTGTGGATAATATCATTCACACGAACACCCT 441849 30 73.3 0 ..A..............CT.G..G..CT.C | ========== ====== ====== ====== ============================== ====================================== ================== 27 30 98.9 36 GTTTAATAGTAATATAAGATATTTTGAAAT # Left flank : CATTAAAGGAGAATATTTAATGAAAAAACAGCTTACATATAATTATGCGTTTGTCTTTTATGATGTAAATGAAAAGAGGGTTCAGAAGGTTTTTAAGATTTGTAAGAAATACTTATCTCATTTTCAATTTTCTGTTTTCAGAGGAGAAATAACGCCTTCCAAGCTTATTGAACTAAAAACAGAGCTGAATAAAATAATAAATAAAAATGAAGATTTTATATGTATAATAAAACTAATGAATGATAATGTTTTTGGTGAAGAGATATTAGGGAAAAGGGATGAGGTAACAGGAGAAGATTTGATTATTTGAAAAATGGTATATGAAATTTACCAGGTGTAAAATTGGAGTTTGTATGTGAGATGGTTGATTTTACTGGCATTGTAGGTGTTTTTGATATGTTGATGTTTGGGTGGAGGCGGACTTGGTAAAAAAGCTGGAATTGGTTGTATTGTGGGGATTTATTTAGTATAGTAAATAGGAGAAAGGGGGATTTGCGTTG # Right flank : TTTTAATTGAAAGACCTGTAAGTTGCTAAAAGCTCAAAAAGCCCCCTTGTTGTTTTATGACTGTCTTGATTCAGAAGATGAGCTGTTTTATTTTGCCTATTTCACAGTTCTCATCGAGCATGTAATTCAATGCCAGACATAGATTGTATGCCAGTACTTTGTTTACCAATCGGGTGCATAGTCCTTGAAAGCTTTTGGCGTGTACTCTTTCCGCATTTAGCTGCTAGCTTAGCTGGGAAAATACTGTCTCAACACGTCTGCGCAGTCGAAATATCAACTGTCGTACAGGTCTTGCCCAGTCCGTTTTACTGTTGGACCGCTTCAACGCCATCAGGCAGATACCCTGTTCCCTCATTTCCCCGCTAAGTGCTTCACCTACGTATCCTTTGTCTCCAAGAATCGTAAGGGGCTGCTGCTGCATCACCAGGTCTCTGAGTCCTTCTCTGTCATCCGTGGATGCCAGGGTGATTTCAAAAGCGGTTATAAAACCCTCCAAAGTA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATAGTAATATAAGATATTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 60339-58267 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGI01000008.1 Eisenbergiella tayi strain NML 120489 BEH84_contig000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 60338 32 100.0 35 ................................ TTGTCGATGTCGGTCAACTTCTCCGAATCAGTTTT 60271 32 100.0 34 ................................ GCGGTGTGGAATGTTGGCGGAACTGGTTATCAGC 60205 32 100.0 33 ................................ TTTTCTTGTCATAAAATTGCCTCCCTTATTGCC 60140 32 100.0 34 ................................ ACCAGTAATCACCATATCATAGGTTTTCTGTACG 60074 32 100.0 34 ................................ CGTAGGTTTGGAGAGTCCTTTAATCCAGTTGCTT 60008 32 100.0 34 ................................ CTTGGGATATCGGGGCTGTCGTAAGCTCCATGGC 59942 32 100.0 33 ................................ CATTTGTGGTGTAATAATTGTTAATCGTATTGG 59877 32 100.0 33 ................................ TATTAACTTGATACATAGTGGGAGCTTTTGGAT 59812 32 100.0 34 ................................ AAAGGGAAAGTATAACTTTAAGAATTTAACACCG 59746 32 100.0 34 ................................ ATAATGACAATTATTTTGTGGATATCTGTGAAGC 59680 32 100.0 34 ................................ TCTATATACAGCATGATACACGGTGCTCCAGAAG 59614 32 100.0 33 ................................ ATTATGATAAGGAGCGGTTGCATTAACATAAAT 59549 32 100.0 34 ................................ TTCTCCTTGTACCGTGACTGTAAAATTGAATTCT 59483 32 100.0 34 ................................ GCACGGAATGTGTAAAGTGGTATTTTGCATCGCC 59417 32 96.9 33 .............C.................. CCATCCACATAAAACCCTGCAGGCAGCTGCTCT 59352 32 96.9 34 .............C.................. TGGTTTGCAGACATATCATTGAATTGTTCGTCTG 59286 32 96.9 34 .............C.................. CTCAAATCCATCAAGTGAAAAAAGATTTGTACTT 59220 32 96.9 36 .............C.................. AGCCTTTACTGCATCGTCCTTCTCCTGGCTGAGAAC 59152 32 96.9 33 .............C.................. ACGACCGTCATTGTAAGTTTTGCCAACATGACA 59087 32 100.0 35 ................................ TTCTGAAAATAGAGGACCTGCAGGAGCAGATAGAT 59020 32 93.8 32 .................T............T. ATCAACCCTGCTTTAATGAGTTCGTCTCTCGC 58956 32 81.2 34 .....A..C..T.C..TT.............. TATCATACGTATGTATTAAATGTTCAAAATCAAG 58890 32 81.2 35 .....A..C..T.CG..T.............. AGTTCGTCAATACCGGTTGTAGCTGTTTTTATATC 58823 32 75.0 33 .....A..C..TACG.TT.............. GTTTTAGGTGTATGCCATTTACTTACCTCAACA 58758 32 78.1 34 .....A..C..TACG..T.............. AGCAGATGCACGATACACATAATAATTACCCGCT 58692 32 78.1 34 .....A..C.TT.CG..T.............. AATGATACTTACAAAACAATCCAGATTACGCGTA 58626 32 100.0 34 ................................ TTTAATATTCACTCCATCTACTTGTACAACTTTT 58560 32 96.9 33 ...........T.................... GACCATGAGGATTTTCTAAGCATCTTTGATTTC 58495 32 96.9 34 ...A............................ AGATCCGTGGACTGTCAGATGCAGAACTGCAGGA 58429 32 96.9 33 ...........T.................... AAAAAGACTTGCCGTATGATGCACGGCGCCTGC 58364 32 96.9 34 ...........T.................... CATTTATCCACATAATACTTTGCAACTGCAATGA 58298 32 90.6 0 ...........T.C..............G... | ========== ====== ====== ====== ================================ ==================================== ================== 32 32 95.3 34 GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT # Left flank : AATATTTCATTAGCGTTATATCTGATAGATACAAACGAATATTTGATTGCTTATTACCCTTAAAAACAGAACTAAAAATAAATGTAATTATTTGTTTGATAAATATGGAGATTAATTTTATATGTTTAGGACAAACATACACGATATAGATATTTTTTAGTATACTGGGGATCATTTTCTTGATTTATCTATGTGGTTATTCAGTAATACTAAGTAAAAAGTATTATTTGTATCATTTATTATGTAATATGTGAGTAGAAAAATCAGTGTTATTTGTTTTATATAGTAAAAGCAAAAGCAGTTTACAGTTTTAAGAGAGAGATAAGCAAGGTGCGAATGTATAGTGCACATGAAATTACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTGATGGTTTATCATATAAAGGTATTTAGAAATATTTGTGTAAAAGTTATATTTGTAGTCTAAATCTTTATGTTTTTTTGAATGTTTTTGCT # Right flank : ATGGATATCAAATGATATATCGAACTTATATACAATATAATATTAGATGGAAAGACAGATGAAAATATGGATTGAAATATTGAATATATGTTGAGAAAAGAAATGACCATAGCCAAATATATAAGAAGTATATTTCACAATCTGTAGGAAAGAGTACATCAAAAGGCCATGTTGAGCCAGTTCATAATTCTCTTGCTAAGCGCAGCAGAAGGTGTACTATTCCATATAAAGATAAAAGAGGTTGGAATTTTGGGAGGAAAAGAAGCATCAAGAGGTTTTTTATATCAGGCATTTGCTTCCGTTCTTGAAGCGTTGTGTCAGAAAAATTGGGATAAAATTTATATAGAATTAAAGTCGAATGATGATAAAGTTGATATTGCATTAGAAGAAAATGGCAGAATTATTAAAAGTATTCAGGTGAAATCAACAATTAATACTTTTAGCAAAAGTTCAATACAAACATGGCTAAGTGATCTTATTCGTGACGATGTAGGTTCGGC # Questionable array : NO Score: 8.78 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [39-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 64330-63115 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGI01000008.1 Eisenbergiella tayi strain NML 120489 BEH84_contig000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 64329 32 100.0 34 ................................ CAGATACTCCTGAATGATGTTATCAATGACAATT 64263 32 100.0 35 ................................ TGCCATAGTGGTATGGTGGGATGAACATGTGGCAC 64196 32 100.0 33 ................................ TGCCGTATTTATGATAAAGCCAAAGAACAGTCT 64131 32 100.0 34 ................................ CGCATGAAGGCATGTAAAAAGTTTCAGGGTTCCC 64065 32 100.0 35 ................................ AGATAGGCCTCCGTGGCACTGTGCATACATACACC 63998 32 100.0 33 ................................ TTAAAGAATTGCATGAACTCGGGGAAATGCAGG 63933 32 100.0 34 ................................ GTAAAAATGCAGCTAATCTAACAGGCCAATATTT 63867 32 100.0 34 ................................ ATGCGAAATTAAGCGCCAGCGGTGCCAAGCGGTG 63801 32 100.0 33 ................................ AATGCAGTTAGCTCTGATACGCGGACCGCACTA 63736 32 96.9 33 ................T............... AAACACAGGGATTAAAGCGAGCCCTACAGTTGG 63671 32 100.0 32 ................................ TTAACAATTATAGATTGAAGAAAGAGGAAGAA 63607 32 100.0 34 ................................ CTCTGCTGCAAAATATATTATTAAAGACATTGAA 63541 32 100.0 34 ................................ ATCCATTTTCTGTTCATTGACCCAATCAGTAATA 63475 32 100.0 33 ................................ TGTATCACAAGCATCAGATAAACCATTCCTATC 63410 32 96.9 33 ...........C.................... TCTTCCGATAGTACCAAAAGAAAAGGTGGAGTA 63345 32 96.9 34 ...........C.................... ACATCATCCTTCATCTGGGCGGCAGCCTTATCCA 63279 32 93.8 34 A..................T............ CTTCTGATTTTATTGTGACTCCTGAGTTTGAACA 63213 32 87.5 35 ..T........C.C.........A........ TTTCTTAATAATTTTTCTTTTTTCATCGTATTGTC 63146 32 78.1 0 A..........CA......T..AA...A.... | ========== ====== ====== ====== ================================ =================================== ================== 19 32 97.4 34 GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Left flank : TATCATGCGGATTTATGATATTATGAATGAAGTGATGAAGTGTTCCTTTGAAAAAGTGGTACAGGCGAGAGGAAACCGGGCCGGTTTGTATTATCATGGACGGATTGTGGACGCTTTTGAGAGGAAGGATGATGAAGCGGCTGAAAAAATAATGGATGAGCATATGAAAGAGTTGTATGAGAGCTTTTTTAATGATTTTAGGGATTGAGAATGCTGTATGGACTTATTTTATTAAGTAAACGTTATATTGAGTAAAAAAAATTAGTGATATTTGTTTTTAGATGATAAAATAAGAGTGGAGTTTATAATTTTAAGAGGGTCATAAGTAAGGTGCGAATGTATAGTGCACATGAAAATACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTGAAGGCTTATTATAAAAATATGTGATGATATATTTGTGTAAAAGTTATATTTGGGGGTTAAATGGTTATGTTTTTTTGAATGTTTTTGCT # Right flank : TGCATGACTGGTACAGACATTATTTATTGTATGTCAAAGTTTATATAACATCGTGTTGAGTTTGGAGGAACAACGCTGCTTATGTTGTCACAATGCTATGAAAAAATTGTAACATCCGAGAAAGCTTCCAACAGAAGATATTGTGGAGGTAATAACAGTTGTGTTGAAGCATTTTAAGGTAATTTATAGTATGAAAAAATAAGTATTTTGATTTAAACTAAAAAGTGTGCATAAATTATTTGTGTAAATATCTGAGTTATTTAAAGTATTATATGAGCCATGTTATAAAATATGGGAAGATCAAACAATTGTAGGAAAAGTATAGAAAAGGGATGAGTTATGGAACCTTCAAAAAAAGATTGGTTACTATATAGGGAAAAGATAGCAGGTTGGCAGGAAGCTTATATGGAAAAGCTAATAAAAGAATATGTCGATTATCTGAATGGTGACGAACCTGCATCTACAAAATTCTGGAGAATGGAAAAGCGTATCAAACAGGA # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 76517-75361 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGI01000008.1 Eisenbergiella tayi strain NML 120489 BEH84_contig000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 76516 32 100.0 34 ................................ CACCAGATTCCGGGCGTAATAATCTCGGCTATCC 76450 32 100.0 33 ................................ ACATGAATGGTTTCTTCCGCCATATGGCGCATA 76385 32 100.0 33 ................................ CACAAGAGAAAGACCGTGGCATTCTGCGTGCCG 76320 32 100.0 34 ................................ GTGTCTTGTCATTAATACACGGCACGGGAACTAT 76254 32 100.0 36 ................................ AGACAATCTCAAAGCCAATTCAGGAGGATGAAGAAC 76186 32 100.0 33 ................................ TCCTGGTAGAAAGATCCATATAAATATAACTGG 76121 32 100.0 34 ................................ ATATCCAGATTTGGATTTTTCAAACGATACCCTA 76055 32 100.0 34 ................................ TTTGCTGATTGTCAATGCGGTTATGGTATATATT 75989 32 100.0 35 ................................ AAGATGGGCGACGGCTCCGGATCCATTTACGAAAC 75922 32 100.0 33 ................................ TTTTCAAGATTATCCTTTTGAGTTGTCGTCAGA 75857 32 100.0 34 ................................ CCATATACTAAAACCTCCCCAAAATATCGGTTAC 75791 32 100.0 35 ................................ ATGTGAAAATAGTCTCTGTATAACGGATGTAATTT 75724 32 100.0 35 ................................ ATGGTGGAGACATATCAATCCGGAAGCTGGGGGAT 75657 32 100.0 34 ................................ GATATCAGTAAATGAGTATTTTCTGGAGACCAGA 75591 32 100.0 34 ................................ TTGCCACTCTGGATCCGCATATTTTTGCCACTCT 75525 32 100.0 34 ................................ TGAAAATGAAAAGGAGTAAAAATGAAATGTGTAC 75459 32 96.9 35 .............T.................. CACTATCTGCCAGTGTACCAGAATCGAGGATAAGA 75392 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 18 32 99.8 34 GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Left flank : AGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTTTTGTTGTTATAGCATAAGGAATAAGAACAATAAATTTTATAGTCATATAATAGTTTATTGTTAGCATGATTAGAGTTTTATTGAGTAAAAGTACTTGTTTAATTATGAAATTTGCGAACAGAGTTATTGTTAGTGCGAATAGGAAGTGCACATGAAATTACCGAGAGATTCGCACCTGAAAAAGAGTTGTTTTAATGGGGAAGAGATTGAAAATAATTTATATAAAGATATTATGAGGTGGAAAATATAATAAGTATATAATTAAGTTTGTGTTATGAGATTGTTTTTTGGATATTTTTGCT # Right flank : TGTAAGAAGTCGCACCTTGCATTGATGTAAATTGCATATTATTCATAGTTAAAACTTATCCAATAGTAAGCTGTCGTTTTATGTATCTAAGAAATAAAAGAATACATCCAATAGACAACACATTTTCGCCTTTATGGCATTTGGCAATTATTATCTATAGTAAAATAAAGAACGATTTATAATATATACATTCTCTTACAAAATGAGGTGAAAAAATGGGAAAGAATGAAGATTCTTTCTTCCTGAATTACCTGCCAATAAGTATAACTTTGGTATCCCTGGAAAAGGCCGAATTACCTCCATTTTTGGGTTCTACCCTTCGCGGTGTGATTGGACAGGCATTATTTCAGGATAAGAATGCCTACAATTATCTATATCACAACGGCAAAATGAGCAGTAATATGCAAGATATAATTAATCCGTATGTGCTCATTCCTCCTGATACAAAGAAGAAAATATATTTTGAAAAAGAAGAGCTAAACTTCAAAATACTTCTTCTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAAGCCTATACGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 78213-77318 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGI01000008.1 Eisenbergiella tayi strain NML 120489 BEH84_contig000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 78212 32 100.0 35 ................................ CTTGGAATATCCCGGAACCGTGTATACCTTTACTA 78145 32 100.0 36 ................................ ACCAAGTTATTCTAGGAGCTTTTACAACGGTAATAC 78077 32 100.0 35 ................................ GGATTTTTGTAGCAGTAAGGGGATAGATGATACCA 78010 32 100.0 35 ................................ CACAGATATACAGTTTTTGGGAAAGAGTGGACCTA 77943 32 100.0 34 ................................ GCCTTCTTGCGAATTTAAGACACTGGCAAATGGT 77877 32 100.0 35 ................................ GGCCATACTCAATAACATTGTGCATATCGTACCTG 77810 32 100.0 33 ................................ CCTGGGGAAAATAGCTAAATGGTTTGCAGATAT 77745 32 100.0 34 ................................ AGTATGAACAATATCGGTATCGACACGATCGCTA 77679 32 100.0 32 ................................ CTTTCCGGTACAGTGCAAAATCTGAAAATTGA 77615 32 100.0 34 ................................ TGTTTTTCGCCGAAAAATGGACAGCTATTAAGGA 77549 32 100.0 33 ................................ CGTCATATTGTCTACTTGCTCTAAAGTATCATA 77484 32 100.0 35 ................................ TTCCTGATTTTACAAACAGAGGCGGGAATAAAAAG 77417 32 100.0 33 ................................ CACAAGAGCAATTGTCTTACTATGCTGTTCTCG 77352 31 90.6 0 .............A...........G-..... | A,TTT [77327,77329] ========== ====== ====== ====== ================================ ==================================== ================== 14 32 99.3 34 GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Left flank : ATGAATATCCACCTTTTTTCTGGAAATAGGAGGCTGTCATGCTGGTATTAATTACTTATGATGTGAATACGGAAACTGCCGCGGGTAAGTCCCGGTTAAGAAAAGTAGCAAAGCAATGTGTGAATTATGGAACAAGAGTACAGAATTCTGTATTCGAGTGTGTTCTGGATCCCGGACAGTGTTTAATGCTGAAAGCTGCATTAACGGAATTGATTGATGAAAATGTGGATAGTCTCAGATTTTATTATTTGGGGAATCAGAATAAGGCACGGGTTGAACATGTTGGAGTGAATAAGGGGATTAATGTGAAAGAGCCTCTGATTTTTTAGTGCGAACCTGAAGCGCACATGAAATCCCCGGGGGATTCGTACCGGAATTTTGATGAGATATTGCTTGGGGTTGCTTTTTGATGTGGAAGAATGTAAGATGTAAAGTGAATTGGGTGTGGATTGTTGGTGAAGATGAATAGGAATTAAGAGTGGTTTTTGTGCAAAATTGCT # Right flank : ATATTATTGCGATTAGGGTATTTATGTAAATCTCATAAGTATATTGCCATAACATTTTTTGTAGGCAATACGATGGGGAATTCATAGAGAAGAGTATGATTTGAGATAGGGAACACGATAAATATATTATGAATACTTAAGCAAATGACGTTACCAGTCTGTCTTGTTTTGTCACGGATAGAAAATATATTAGAAAGATTACCATTATTAATCATAATTTTCATGGATAAGTTATTATGGCAGGATGTAGATATTATAAAAGGTTTTAGGTGGAAGTAGATGGAGATTTACTGAATGAAGGAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACCACCTTGCGGGTGGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 87143-86049 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGI01000008.1 Eisenbergiella tayi strain NML 120489 BEH84_contig000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 87142 32 100.0 33 ................................ TGCTGTACAAAAGAGTGTGACTTTCAAAATTGA 87077 32 100.0 36 ................................ AGGTAAAAGCCAGCTTTACTCCACTGTGATATTATT 87009 32 100.0 34 ................................ TTGTAACCCTTAATCTTCCGGACAGCATAAGGCC 86943 32 100.0 33 ................................ CATACTCATTCTCTATCAGGCACCAGTGCTTAT 86878 32 100.0 34 ................................ ATCCAGGCTCCCCATGGCCTCTACCAGGCAATAC 86812 32 100.0 35 ................................ GTTAATATCCTTTACCAAGCGATAATGCGGGAATT 86745 32 100.0 33 ................................ GTATATATTGATCCTTGTATTTGGGCCAACGCC 86680 32 100.0 34 ................................ TTCTTCCTCATTTGACACGGCAAAATGGACAATG 86614 32 100.0 35 ................................ CCTTACGAACGCCCCACCACATAAATACGATACCG 86547 32 100.0 33 ................................ GGCGCATGAAGGAGGCATGGAAACCATGAAGAA 86482 32 100.0 36 ................................ ACTTCATCGTCGTTCATGTTTTCACCTCCTTGTCTT 86414 32 100.0 34 ................................ CTCCCGGCATAATATATCCTACCCGCCGGCAATT 86348 32 100.0 35 ................................ TTATAATCCATGGCTTTTATAACATCACGCCAGGT 86281 32 96.9 35 ..........A..................... CCAGCAAACGATGGAAAAATATAAAAAGGTTTTGA 86214 32 96.9 34 ..........A..................... ATCTACCATACAGGTTCCGTAATCATTGTCATCT 86148 32 93.8 36 .....G....A..................... AAACATGATCAAGGCATCGGGGGCCAGGCGGTCTTT 86080 32 75.0 0 ......T.GGA...AA....A.........T. | ========== ====== ====== ====== ================================ ==================================== ================== 17 32 97.8 34 GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT # Left flank : TGATATGATTGATTTTATTTTGCAGAACAGTTATTTTTAATTTATTTATCTATGGTAATTATACACTTGCGTGTATGAAATAGGAAGATAATTCTTGGGAAGAGTTGAGGGGAATGAGGGGGAAGGGGTTACTGGATAGTGTTGAGAATAAAAATTGAAATTTGAGTAATTTACGAAATGGAGAAGAAAGTTTCTTATCATTTTGAAAAATATGTGATATACTTTTATTTATGGTATTAGGCTTTTGGAAGGTAAGTTTTTTGATGATATGAATGGAGGATTTGAGAAAATAGTTGGTCAATTGTGATATTTGAGAATTGAGTTATTTGGTGCGAATAGGAAGTGTACATGAAAATCCCGGGAGATTCGCACCTGAAAAATGGTGGATTTAATGGTGAAAAGATAGAAAATGATTAAAATGTGGTTATTGTGAGTGGGGATATTATAATATGTGTATAGATTGTTTTTAAAAATGAGATTGTTTTTTGGATGTTTTTGCT # Right flank : AGATTAATATCCATAGAGTTCACATACTGCTCGAAGCCTTTACCGTGTCAAGTATCAAAAAATATTTCCAACATCTACATAAAAATAGTAATTATAAACAAAAAATATATTTCATGCTATAATTAGCAAGGTAAAATAAACAAAAAACACCACACTTTTGGAGGAACATTATGTTCTTAGCTCATATCAGTGAAGATAAGCTTCGTGAACAAAGTATTCTTGAGCATCTGGAGGGGACTGCTGAATTAGCAGGTGAATTTGCCTCTGCATTTGGATCTGAAGCTTGGGGATATGGCTGCGGCATGATGCATGATATCGGCAAATATTCCGATAGTTTTCAGAAGCGTATTCATGGGGGAAAGCTGACGGACCATGCCACTGCAGGTGCCAGGGAATTATATCAAAGACATAATTATGTCTGCGCATATTGTATATCAGGGCATCATACCGGACTTTTAGATGGAGGAAGTGCGGCCGACGTGGGAGGCGAAGCCACATTA # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //