Array 1 824-2178 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMNW01000003.1 Duganella sp. Leaf126 contig_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 824 29 100.0 32 ............................. GCTGGCAGCGGCGAGCCGACCCGCCGGCTGAA 885 29 100.0 32 ............................. CTGACTGTTGGTAAGCACCCTTCCGCGCCACC 946 29 100.0 32 ............................. CCAGGCGGACGCCGATTACCGTAGCGTGCGCA 1007 29 100.0 32 ............................. GCCGACCAGGCAATCGTGAATCGCGTTTCCGG 1068 29 100.0 32 ............................. GCCTTTCTAAACGTTGAGGTGTCCGCCGACGT 1129 29 100.0 32 ............................. ATAACCAACGGCAACGAACAGTATCAGGGGAC 1190 29 100.0 32 ............................. CTTCTGATAGGTTCATGGCTTCTAACCCTGAT 1251 29 100.0 33 ............................. TCCTCGGGCAGCGCATAGGTCTGCTCGGTGGCC 1313 29 100.0 32 ............................. AAATGCTTGGCGGCCAGTTCTGCCGCGAACGA 1374 29 100.0 32 ............................. AACCTGCAGGGCGGCTTTCACCTCAGTGCGCT 1435 29 100.0 32 ............................. GTTGACCGCCTGCCAGGCAATCGCGTCCTGAT 1496 29 96.6 32 ......T...................... CCGCCGCGTTTCTGGCCGCCTGGCAGGTAGTC 1557 29 100.0 32 ............................. GCCGAATGGCTGATCAACAACAGCCACCGCCT 1618 29 100.0 32 ............................. GCGACGGACAACAGCGACAATTCCTTCGACTC 1679 29 100.0 32 ............................. GGCAGATGACGTCTCAAATTGGCCTGTTTTCA 1740 29 100.0 32 ............................. TCGGTCACGGCCTGGAAGAACGTCAAGCCGGA 1801 29 100.0 32 ............................. CAGGCCAAGAAGGAAGAAGATAAACCGAAGAA 1862 29 96.6 32 .......................A..... GGCATCCCTGCCGCAATAAATCCGTGGGCGAT 1923 29 96.6 15 .......................A..... CCCAGGCCGCGCTGG Deletion [1967] 1967 28 89.7 32 .....-..T............G....... ATGTTCGAGCAATTCAAATCCTCACTCACGAG 2027 29 96.6 32 ...........................T. CCGGCAGGCAACCGGAGGACTGCCAGGGCCCA 2088 29 72.4 33 T..C.....A...C...A...G..CC... CGCACCGTCGAGCTACTGAGCAGCCACGGCGAC 2150 29 69.0 0 .....G..TT.C.....AA....AGC... | ========== ====== ====== ====== ============================= ================================= ================== 23 29 96.4 31 GTGTTCCCCGCGCTCGCGGGGATGAACCG # Left flank : TATCGAAACTTTACTGGCCGAGGGCGGCATCACCCCGCCTGTCGCCCCCGCCGAATCAGTGGCGCCGGCCATTCCCAACCCAGAGAGTATCGGCGATGTTGGTCATCGTTCTTGAAAACGCCCCGCCTCGACTGCGCGGCCGGCTCGCCATCTGGCTGCTTGAAGTTCGCGCAGGCGTCTATGTCGGCAATTACTCCCGCCGTCTGCGCGAGCATATCTGGACGCAGGTAGAAGAGGGCATCGAAGACGGTAACGCCGTCATCGCCTGGCGTAGCAATACCAATGAGGCCGGTTTCGACTTTCTCACACTCGGCGAAAATCGGCGCATGCCAGTCGAAATGGATGGTATCAGACTGGTATCGTTCCTCCCCCTCCCCATTCCAGACGAGCAATAAACGCTTGTTCTTTTCTCCGTTCTTTAATAACTAAAAATAGTACGAAAAATCGGTGGAAAATGGAGGGGATGATTTTCCCTTATTTTTCAAAAGGTTATAATTGGT # Right flank : GGTCATATAGCTTTGCCACCGCCACGGGCTTGCATTGTATTCGGTGCAAATGCGGGGTTGTTGCCATCGCCGTTCTATTCGCTGTCGCGAAAATCGTGCGCACGGTGATGCGCCGCCCTCGTGCTGCACCCAGCTCGTCCAGCACCGGCGGATGGAGTGCTTCGTGGATGGTTCCGGGCAGGGTGTCGCCCACCCTGGGCGGTGGCTTTTACCGCCAGGAAGGATTCGAACAGGGCGCGCAGCGCCCATTCACTCCCCAACCCGCACCACCAGCTTCCCAAAATTCCGCCCCTCCAGCAGCCCCATAAAGGCCTGCGGCGCTGCATCGAGACCGTCGACGATGTCTTCGCGGTACCGTACTTTTCCGGCGGCGATCCATGAGGCCATCTCTTTGTAGAACGCCGGGCGCTGGGCGACGAATTCGCGCTGGATGAAGCCGCGAATGGTCAGGCTGCGGCTCAGCACTTCGCGCATGAAGCCGGGGAAACGGTCGGGGCCGG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //