Array 1 12236-13196 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACFU01000043.1 Campylobacter rectus RM3267 contig00014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 12236 29 100.0 41 ............................. TTATAATCGAAGCCAAAGAAAATTTCATAAAGAATTTTGAG 12306 29 100.0 38 ............................. TTCGGATCGGGCTCTCCGTTTGTTTTGGCTATGGCTAT 12373 29 100.0 39 ............................. TCGCAACCAGCGCCAAGGCTCTATCATCCGTCCTTTGGC 12441 29 100.0 37 ............................. TACCGCTTTATGCACGGTGTAGTATTGCGAGAGCTAG 12507 29 100.0 38 ............................. TGCAAATTCAAAAAATTCTTTCGGAGTAGGGCAAAAGT 12574 29 100.0 39 ............................. TGATGATACTGTTGTATTGTTGCCAGAATTTTGAGCTAG 12642 29 100.0 37 ............................. TTAAATTCGTTTGCGATGTTTAACGTAGACGCTAGCC 12708 29 100.0 36 ............................. CACGTTAAAACTAGTTGTCTGAGAATTTTCATAAGA 12773 29 86.2 36 ..........G....GCC........... TTTTCAGTTGCTACTTCTTCAAAATCTTTATCAGTG 12838 29 96.6 37 ...............G............. TTTATCAAACCGGGATATCTAAGGAGGGCATGGCCTA 12904 29 100.0 36 ............................. CATCGATGAGGATAGCCATCCTCTTGAAATAGATGT 12969 29 93.1 36 ...............A....A........ CGGTATAATGTCGTTTAACATAGCTTTATTGAGGGC 13034 29 96.6 36 ...............G............. TGCGCACTAGGGAAGCGATATTGCCCTAGCCAGATC 13099 29 100.0 38 ............................. CCCGCATGATGATAATACACAGATGGTTCAGGCACCTG 13166 29 79.3 0 A..............G......A.G..TG | A,A [13184,13186] ========== ====== ====== ====== ============================= ========================================= ================== 15 29 96.8 38 GTTAAATTTTACTCCTTTGGGGTTTGAAA # Left flank : TATGGATTTACGGTAATGTTTTTTAGAAACGACTACCCTAAGCACCGACGCTTTCGGTGTTTGAGAGGATTTATGACTACGGGCTTGAGTTGTTTTGATCCCGCATTTTTAGGTAATTTTATTGCGGTACATCGTAAAATAGCCTCTATGCGTCTTGAGATTTTATTATTTGACGGCTCGAACGGCTTGCTAAATTCGTATCGAGATATCGGACTTTAGGTAAAATAATCCGCTGCCGCTAAATGCTTTGGCTTCGTGTATTTAACTCGACTTTGGATAAAACGATCGGCTGTAGATGATTTTGCAATGATGCGGCCGGTTTTATCGCTTGCATTTTTAGGCGCGCTTGAGTTATGCCGATAAAGCTTTTTATAAGATTTTAAAAAGGGCGAAATTTGGGGTGTTTCGCGTTAGTTTGGTTTTATATTTTAGTCAAATTTAAGGCGTAAAAATATAAACTTTTTATTTTGATAGCCATTAAAATGTATGTTTTAGTGCGG # Right flank : GAAACGCATATCGGCCAAGTATTTCGGGATTACCGCTGCTCTAGCGTGGTTTTTAGCTCCGCCTGTGGTTATTTCGCCTCTTACATCTGCCGCATATAAGGCTTTAAATTCGTTAGCTAATCTTTTTAAAGAAACCTGTTATTTCGTGGCACCGCTTCGCTTGTTTTCTATCTTTATGAGATAGAATTTAAGCCTTGGGAGGTGATGAGCCTATAGCTTTACTTATTTCGCTTAGATTTCCGTAGAGATTATTAAAATTCTGTTGCAAGTGATACGCCTATTGCTGCAAGTAAATTTTAGTATGTCTATGGGGTCGCCGTGGCTTTTGTTATGGTCTAACCGCCAACTGTATGTTTATTATTAAATTAATATCCCTTTCAAGGCGAGGTAAATTTAAAATTTCTACTTTTTAACAAAATAGAAAAGTAGCATTTAAGAAAATAATATAAAATTTTTTAAAAAGTCTTCTTTTCTTAAGTTTTTTGCAAAGAGTAGATTAT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAATTTTACTCCTTTGGGGTTTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 3323-3477 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACFU01000025.1 Campylobacter rectus RM3267 contig00039, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 3323 25 96.0 39 ............C............ CTTTTGATTTCGCGGACAAACAAAGTCCGTCCTTAGTTA 3387 25 100.0 41 ......................... CCGTATTCTTCGCATACTTGATTTTCGGGCATTATCGGTTA 3453 25 96.0 0 .......................G. | ========== ====== ====== ====== ========================= ========================================= ================== 3 25 97.3 40 AAATTTACTCCGTTGGAGTTTGAAA # Left flank : CTGCACCAAAAGCTAAAAAGTAAGGACGAGAGCGAGATTTTGGCGATATTTTTGAAATCCTGCAAGCTTGATAACAAATACGGCTGCTATAATGCGGCTAATTTCTACCGCCTCGGACGCGGCACGGAGCACGATTTCGCCGCAGCGCGCAGGCTTTATGAGAAGTCATGCCTGCAGCTAAATCACGCGCAAAGCTGCTCAAACCTTGGCGGAATGTATCAATTTTCGCTCGGCGTCAAAACTGCCGACTCCAAAACCGCGAAGAAATTTTACAAAATGGGCTGCGAGATGGGCGATGAGATCGGCTGCAGAAACCTCTCGCTCGTGGGCGACGAATAAATTTTACTATCTTGCGCAGCGACTTCGTCTTTGTTAAATTGCTTAAAATTCGTTTAAATCCGCCGCGAAACTTAGTAAAATTTATAGCCGTCCGGCTATTTTGCGGCGTAAATTTAAGCTACGAGACACCGATTTTGCCAAACGCGATTGTGATTTGAGTT # Right flank : ATATGTTTCGGGTCAAATTCGCGGCCGCCAGTATCGGTTAAAATTTACTTGCTTGCCGCCAAATACCTGCACCTTTACGGCGCTAAATTTCGTTTTTGAGCTTGCAAAATCAAAGGATACTTCTAAATTTAGCAGATAACGGGCAAAATTTGGCTCACTGCTGTTTGATTTTGGATATATAAAAACGGTTTTGCGTGCGGATAATTTATAATTTCTTGCTGGCGTTTGCTTGCGATGTATCGCGAAAAAAGTCGGCTAAATTCGGAAGAGTTTATTTGCGGGCTGGTAGGGCGGCAGAAAATTTTTGTTGGCGCGACGTTGGTTTTGCGGTTTTAGATTTGCGATCAAATTTGTATGCAGAGAAGCCAAGTATCCCTGAAACCGTAGCCGTACCTAGCGCAAGTGCCGGGCTTAAATTTTTGCTTACGGCGATGGATTATAGTATCGCAAAATTTAGTTTAAATTTTTAAAGTTAATTTTGATTTTTAGCGACTTAGCGT # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAATTTACTCCGTTGGAGTTTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 96334-94263 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACFU01000001.1 Campylobacter rectus RM3267 contig00003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 96333 30 100.0 35 .............................. TCCAGAAAGCCAAAGCGACGCTTTTAAAAAGTTTT 96268 30 100.0 35 .............................. TAACGTTGCTTATAATGAAGTTTTAAAACGCTTAA 96203 30 100.0 39 .............................. TCGATACCGGACACGGCTTGTTTGATTTGCTCGTAGACC 96134 30 100.0 35 .............................. CGACTACAAGAGGCGCGCTCAAAAAGTCGAAATCT 96069 30 100.0 35 .............................. TTATTTTAACTTTCACGAGACAAGGCATGGGCGTA 96004 30 100.0 36 .............................. ATCCGTGCGTTTTTACTGCAAATTTAGAAAATCAAG 95938 30 100.0 34 .............................. TTGCCGAAAACAAGTCCGTTACAAATGCCTCTTT 95874 30 100.0 37 .............................. AACTGGTTTATGCCCAGTTCTTGTAATTTCGCAGCGA 95807 30 100.0 35 .............................. TCGGTAATATAATAGAAATTGTCCTTCTTGTATAA 95742 30 100.0 36 .............................. GTAAAAAACAGCTATCGTCAAAGGGGGTTTGGCGAT 95676 30 100.0 37 .............................. CCCATCATACTTACGTTTGAAGAATTGGCCGCGATTA 95609 30 100.0 34 .............................. CTTGTTAGTCTTATGTTGGCTATTGTTTTTCAAA 95545 30 100.0 34 .............................. AACGCCACAGCGCATCAACTCATCCTCTCCGAGG 95481 30 100.0 35 .............................. CTTAGGTATTGGAGATAGTTCAGCCCCTCTTTCAG 95416 30 100.0 35 .............................. AAAACAAAGGAGTAAATCAAGGTGTTAAAACTTGA 95351 30 100.0 34 .............................. TATACAAAAGAAAAATTATCATCCAAAAAATAAA 95287 30 100.0 37 .............................. GTCAATGAAAAAGCTAACGGACTATCAGATAGCGTTT 95220 30 100.0 36 .............................. AACATCGCGAACGAATTTACAAAACTATCCTTGACG 95154 30 100.0 37 .............................. TCGGAGCGGTAGCCGGAGCCCTCATAGGCGGAGCATT 95087 30 100.0 36 .............................. TTACACCGCCAACGCTCGGTTTCTCCACCCATTGGC 95021 30 100.0 37 .............................. CCGCTGTAGTCGATTTTGCCAATAAACCAAATATCGT 94954 30 100.0 36 .............................. AAATACTCTTGAGTATTCTCGCAATCATCGAATTGC 94888 30 100.0 34 .............................. AGGTAGAAAAGCTTTTCGCCCTCGATCTCCTCGC 94824 30 100.0 35 .............................. TCCCCGTCATTCCTGAAGGAGTTGTAGACTTGGTA 94759 30 100.0 37 .............................. CGTTTGAAATAGCTTGCGATCTAATCGAACGAGCGGC 94692 30 100.0 36 .............................. GCAAAGATGAATTAACAGACAATAAAACGGTATTTG 94626 30 100.0 37 .............................. CCGTAGGCTTTCCGCATACTACGCAAAAGGGCTGTCT 94559 30 100.0 36 .............................. AAAATCTTAGCACCTAGCCAATTTTTAGGCGTAGCT 94493 30 100.0 37 .............................. AACGTAACTACAAAACAACTAAGAAGCACCTAAAACC 94426 30 100.0 34 .............................. CGGCTAATTCCCGCAGCTTCTATAATCTTTTGAG 94362 30 100.0 36 .............................. TTTTTTACAGCTTTTTACGCTAGGCGTTTCAGCTAG 94296 30 93.3 0 ......................GA...... | GGGA [94269] ========== ====== ====== ====== ============================== ======================================= ================== 32 30 99.8 36 GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GATGCGCCTTATGAGGGATTTAGGTGGGGATAAATTTGATATTTTGTCTGTAAGAGGCAGCAAGTATCTTGGTTGCATTTTGATGATTTGATTTTAGCGCCTTGACTTCATTAAAATGTGGCATAAAAACCGCTACGCATTTACGGTCAAATTTGACCTATGCGCCTTTGGCTGCGGTATTGGTTTTTGCACTAAAACAGCGTTTGTGATTTTGCTTTGGATGTTTGTGATAAAATATAAAATGCACCCGACTTATAAAATTTGCTTTGATCGCTATGGTGAGTTGGATGTTGTTAATTTGCTCTTACCGTAACGGGACATTTGATCTATAGGTGCCCTTTTTAAATCTAAACTATGTCGATAAAGCTTTTTCTAAGATTTTAGAAATGATGAAATTTAGGGTATTTCGTATCGATACTATTTTGCTTTTTATACAAATTTAAGGCGTAAAAATATAGACTTTGAGTTTTAATAGCCCTAAAAATGCATATTTTGGTGCT # Right flank : TCTCAAAGCTCACGTTTTTGGCCTTGCTTTGGCGTTAATTCTTCTTTATCGGAGCCAAAGCGCTTTTGGGTTCATTTAAGCGCTTAAACGTCTGTCTCGTTTTATTTCCTTGGGTCCTAAAACCGCCGAGCAAGCCGACTCCGCTTAAATTTAGCATCTCGGACATCATCGCCCAAATGTTTCGATCCGTTTTGCCGGAGAAAAACGTACGTCAAAAAACCGCCAAAACAAATTTCACTCGTCAAACAGCCCTTTCTCAAAGCTTTTCACGCGAAAGCTGCGCCTTTGCAGCGGCGAGTCGCCCAGCCTCGCGATCGCGTCCAGATGCGCCTTCGTGCCGTAGCCCTTATGCGCGGCGTATCCGTAGCCGCCGTGCACGCCGTCCCACGCTCTCATCAGTACGTCGCGGCTTACTTTGGCTAGGATGCTGGCTGCACTTACCTGCGCGACTTTGCCGTCGGCTCCGACCATGGTTTTTACGCCCGTACCGTAGTTTGCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 34011-37446 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACFU01000005.1 Campylobacter rectus RM3267 contig00029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 34011 30 100.0 36 .............................. GGATGATTTCTTGCTACTATACCCTGAGTATATGTA 34077 30 100.0 36 .............................. ACGGAGGTTTCGTCGGCGGCGCTATAAACATAGCAA 34143 30 100.0 33 .............................. TTGTATTTTTACTCTACTACCAAAGATAATTAT 34206 30 100.0 37 .............................. ATCATAAATTTCAATGTCTCGTTTAAATTCGCTCAAA 34273 30 100.0 37 .............................. AGCGCAAGACGCATAGCAAAAATCACAAATATCGAAA 34340 30 100.0 35 .............................. GCTTCTGTTATAAGTCTGTCTAATTTAGATTGTAG 34405 30 100.0 36 .............................. AAGCCGAGTAGCGCAATGGTAATGAGGCTAGAGCGA 34471 30 100.0 35 .............................. TTTGGCATATATGAATGATAAGGGCGGCAAACCTA 34536 30 100.0 36 .............................. GCTTGTCCTCGTCCATCGTCTTTTTTACGTTATGGA 34602 30 100.0 36 .............................. CTTTTAGCTTTGGCTGCAGCTGGGTTATTTGCACTC 34668 30 100.0 35 .............................. ATATGAGGCGCTGGAGACACTACTTTAAGATTATT 34733 30 100.0 37 .............................. GAGATAGAAACACAATTAGAGTTGGGTATAAGTCAGT 34800 30 100.0 34 .............................. CTTTATCAGACGTACTGCCTAAATTAGATGATTT 34864 30 100.0 36 .............................. GGTCAAATTTTGCCTTGAGATACGCCCCGTCTATCA 34930 30 100.0 37 .............................. GGTCAAATTTTGCCTTGAGATACGCCCCGTCTATCAG 34997 30 100.0 35 .............................. TTCCGTATTCCTCGGCAATAAATAGCTTATAATCA 35062 30 100.0 32 .............................. AAAAACGGCGTAACGCCCAAGCCTAAATTTAT 35124 30 100.0 34 .............................. CGTATTCTTCGCATACTTGATTTTCGGGCATTAT 35188 30 100.0 39 .............................. CTATGTTTATCTAGAACATTTCTGCCACTCTCTTCATTA 35257 30 100.0 35 .............................. CTTAGAGAAATAATAGCCTATCGTATAGGAATAGG 35322 30 100.0 34 .............................. TTTACAAACTGATTTATACCGTCGCGGATACCGT 35386 30 100.0 36 .............................. AATAAACTTAATGGTGAAACTATAGATGTGCTTACA 35452 30 100.0 36 .............................. TTTTACGAATAATTTGCCTTATGCCTTTCGCATAGA 35518 30 100.0 34 .............................. CAGACGCTGCCCGAAGAAACGAGAAAAACATACG 35582 30 100.0 34 .............................. CACCAAGCCCAATTCACATAGATAAGAAAGTCGG 35646 30 100.0 35 .............................. TACGATCGAGGAGATGGGCAAAATTTTAAGAGCGG 35711 30 100.0 37 .............................. AACTAATAGCCTTAAAATTTAAAGACGGACAAGAATG 35778 30 100.0 34 .............................. TTGTCAAGATCGAGTATGGTTAGCTCGACGCCGG 35842 30 100.0 36 .............................. ATTTTAAAAGATTTTTCATTTGGGCGCTATAAGGAC 35908 30 100.0 36 .............................. GGCTTGCCGTCTTTGCCGATTTCGGGTTTGATGAGA 35974 30 100.0 34 .............................. TGGGCTTTTGCTTTTTCCACCTTCTCTGCGTCTT 36038 30 100.0 34 .............................. GCTATTTCGCTCTCTTCTGTCTCTATTTGACTCA 36102 30 100.0 35 .............................. TTGTTCCGCTATAGGTTCTACTTGGAATCCTGGCG 36167 30 100.0 35 .............................. AGTCTATCTAAATTCGTTTAAAATTTCCACCTCTA 36232 30 100.0 34 .............................. AATAGAAATTCGAATATAAATGTACTAAAGTACA 36296 30 100.0 34 .............................. GCATTTTTGCTCCTTAAAATTTGATTTTCTCGGT 36360 30 100.0 39 .............................. TCTTTTTTGAATAGTCAATGGTCGAAATTTCAGGCTCCC 36429 30 100.0 37 .............................. AACACCATAAGCAACGAAGCGAAAAAAGCCGAGAAGT 36496 30 100.0 37 .............................. GATTTACCCTCTTTGATATAGATTTCTTGCTGTGCTT 36563 30 100.0 35 .............................. AATCTGATGAGGGGGATTTTCATCTGAATTCTTCT 36628 30 100.0 34 .............................. AAACGGCAAGCAAGTCTAAAAAGTCTAAGATTTA 36692 30 100.0 36 .............................. TTGGCTTTTAAATTTGGTATGGATTTGACAAACTCG 36758 30 100.0 36 .............................. TTTCATTTGATTTCTTAAGATTTTCATTAAGAGCAT 36824 30 96.7 36 .........C.................... TATTACAGTTTGCTTTATCAAGCTTCGAATAATAAT 36890 30 96.7 36 .........C.................... TTGTATTTCGTCGAGTCCCGCGGCTTTAAGCTCAAC 36956 30 100.0 37 .............................. CATTTAGGATCATTGGGATTTTTCTTGCAAAATTCAT 37023 30 100.0 35 .............................. TCCGCCCAAAACTCGCGCAGTTTAGCTTTGATATT 37088 30 100.0 37 .............................. CTCCAAACACTCTCTCATCAAAACCAAACGGTTCAAA 37155 30 100.0 36 .............................. GCCGCAGCATATCAAGACAATATTTTTCGCCTTTAG 37221 30 100.0 35 .............................. AAAATCAAGCCTGAACCAACCTAATATCAAGCGCA 37286 30 100.0 35 .............................. AAGAAAAAAGAGCGAGATAAGTGCGTAGTGGTGGG 37351 30 100.0 36 .............................. ACGCGACGTATTCTACTACCTCAAACTCCGTGTTCT 37417 30 83.3 0 ..GT..................C..T..G. | ========== ====== ====== ====== ============================== ======================================= ================== 53 30 99.6 36 GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Left flank : TATCTTGGTTGCATTTTGATGATTTGATTTTAGAGCCTTGACTTCATCAAAATGTGGCATAAAAACCGCTATGCATTTACGGTCAAATTTGACCTATGCGTCTTTGGCTGTTTTGGTGTTTTACTCCCAGCGTTGAGAAAATTCGCATCAAATTTGACTTATGTGTCTTTACCGCGGTATTGGTTTTTGCGCTAAAATGGCGTTTGTGATTTTACTTTGGACGTTTGTGATAAAATATAAAATACACCCTACTTATAAAATTTGCTTTGATCGCTATAGCGGGTTGAATGTTGTTAATTTGCTCTTACCGCAACGGGACATTTGATTTCTAAGTGCCCTTTTTAAATCTAAACTATGTCGATAAAGCTTTTTCTAAGATTTTAGAAATGATGAAATTTAGGGTATTTCGTATCGATACTATTTTGTTTTTTATGCAAATTTAAGGCGTAAAAATATAGACTTTGAGTTTTAATAGCCCTAAAAATGCATATTTTGGTGCT # Right flank : CCCGGTGTCGGTATCCCCGCCAAGCTCATAAAATTCTCGGCAAATTTGCGCAAAACCGCCCATAAAACAAGCTTAAGCTAAATTTTACAAAGCCGCGTATAAAACTTACTCAATCCAAAAAGCCAAACCGCCGTTTAAATTCGTAAAATAGCGTAGAAAAATCACCCAAACCAAAAACACATCGTTCAAATTCAAAATCCGTTACAAAAAACCGCTTGTCTCGCCAAATTTAACCCCGGTAGCTCAAAATTTACACATATTTTTAAGTTCGGTTAAAAAAATTTTATTATTTATTTTAGTTTTATATTTTTTTAAATATACTTGAAAAATTTTAAAAATTTAAAGGCAAATCTATGCTCACCGACCTCGTAAGCTCTATAAATTCGTTCCTTTGGGGGCCGTATTTCCTCATCGCGCTACTTTGCGGCACCGGACTTTACTTCACGATCAGGCTGCGTTTCGTGCAGATCTTTAAGTTTAAAATGGGGCTTCATAGGCTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //