Array 1 42112-42806 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHDAH010000002.1 Streptococcus lutetiensis strain PA11559C2 KS18_NODE_2_length_154945_cov_807.242_ID_519, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     42112	    36	 100.0	    30	....................................	TGCTGGTCTGTTAAAAAAGTCTTTGTGTGA 	
     42178	    36	 100.0	    30	....................................	GGGCTGATTCCGGGCTCAAACAAAAACACC 	
     42244	    36	 100.0	    30	....................................	AAAGGTGGTGATGTCAAGAATTTCTCTGAG 	
     42310	    36	 100.0	    30	....................................	TCAGACTCAACAGTGATAACGGTCTAACGT 	
     42376	    36	 100.0	    30	....................................	AACGACTAATAGTAGTCTTGCTGAACGTCT 	
     42442	    36	 100.0	    30	....................................	GGGCTGATTCCGGGCTCAAACAAAAACACC 	
     42508	    36	 100.0	    30	....................................	TTTGAAACTCGGAATCAATGAAGTCTCTGA 	
     42574	    36	 100.0	    31	....................................	ACTTCTTATTTAATGCGGGTTAAGGGACTTG	
     42641	    36	  97.2	    30	T...................................	AAGACCTTATCGAAGAAATACAAGAATTGA 	
     42707	    36	 100.0	    30	....................................	AAAAAATTAAAAACAAAATAGAAAGAGGAC 	
     42773	    34	  83.3	     0	......................--C...ACC.....	|                              	
==========	======	======	======	====================================	===============================	==================
        11	    36	  98.2	    30	GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	                               	       

# Left flank :   ATGGATGATTACCTTGATTATGCCTCATTTATAAGAATTTGTCAGGTTATCACAAGAATGGCTGATGAGTTTCCAAATTTTTATTGTACGATTTTTCCGTCAAACGAAAGCTACTTGTATGTGACTAAAGAAACAATAGAAAATATTACCATTGTTTCAGATTATATTGAATCTTTGTTTGATCTTGATTTTATGTATGAAAGGTTTGTTGGAAGATATCCATCCAACAATGTACCAACAAAAAAAGAATTTTTAATTCTTTTACAGAAGAATGCAAGTTATTTATTTAGTGAGCAAATTTCATATGTGAGTTTAGGAATTTCGGATATGGTAGCTATCAAGATACTAAATAGTTTATATCACTATGATAAGTCAGTTAAATATCCAATTTCAGAGATAAATCAGCTTGAAATAAGCTTTCTTAAGGATAAAGATTGACTTTTAGGCTCAATGAAATTATAATTCTTGTAGAGTATAAAGACCCAAAATGACGATTTGAG
# Right flank :  CCCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGCAGAATTGAGTTTTTATTACCTTTGATTAATAATAACGCTTTCTGCAAAAATTGTAAAATGATTTGCGGTAGCTGATTTTAGCGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGAAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACATTTTCCACTTGATTGACACACCAGGGCACGTT

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.37   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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