Array 1 26583-26015 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABLUB010000017.1 Pseudomonas aeruginosa strain PASP475 NODE_17_length_137942_cov_70.4726, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 26582 28 100.0 32 ............................ TTCTAGACCGCGCCCGAACTCATTTGCAGATT 26522 28 100.0 32 ............................ TTCTGCCGGCAGACACCAGCGGCAACAAGAAC 26462 28 100.0 32 ............................ GTGCACCGCATAAAGCCGCTGCGCGAGTATTT 26402 28 100.0 32 ............................ AGTGGGTGAACCTGTCTATCGGTGACCACCCT 26342 28 100.0 32 ............................ AGCCGGACCCGGACGACCCGACCAAGCGGTTG 26282 28 100.0 32 ............................ ATACCAACTGGTCGTGGCGCGGGATCACCGAC 26222 28 100.0 32 ............................ TTCGCAGTTCGGGCAGCCCCACTGACCAAGGC 26162 28 100.0 32 ............................ ATACAGCCAATCACAAGCCCCCAGGGCAAGAG 26102 28 100.0 32 ............................ ATTCCAGGCGGACCCAGACTTCATCCGGTTGC 26042 28 96.4 0 ...........C................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.6 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CCGCTTCCCGCACAACGCCACGCTGTACCTTGACACCCAGGCGCCACCCGGCCAGTTGTTCGAAAGTGCGAAAACGCGCCTGAAGTCGGCGATCAACGTCCTCGCCATGACCTGCCTGCTCGACGAGAACGAAGAACCCGGCGAAACCCTCGCCTACATCAACGGCGCCTTGCTGAAGCTGGTCAGCGACGCCCTCTCCGAGATCGAAGCGGCCCACCCACGCCAGTAGCGCCCATCCCAGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGAGACGCGATCCCTTCGAGGCCCATTCGCGCGCGAACGGCGAAGCTCACCGCCCGTTCCGCCCATCGCGAAACGGCCTCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGGCTTCTTACGCCCTTGAAAATCAAAGACTTACAAAGCCTCGTAAAAAGAGGGTTTCAAACTGGGAAAACCCTGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGCGGCTA # Right flank : TCGCGAGCGATAGCGATATAGCGCCATAGGGCTTCGGCCTGCGGAGGTCTGGCAGGCACGAAGTCATGCTCACCTGTCCCTTGGGGTAATGGTAATGCCCGTCAGTCAAGAAAAAACGGCGTGTCCCCAAGCAAGGGACGCGCCGTTTTTTCGGGGCCTTTTGTGCTGGCCTACAGCCCGTTCTTCGCCTTGAACTCGCGGCGGCGGCGATGCAGGACCGGCTCGGTATAGCCGTTCGGCTGCCGGGTGCCTTCCACCACCAGCTCCAGGGCGGCCTGGAACGCGACGTTGTCGTCGAAGTTCGGCGCCATCGGCCGGTAGGACGGGTCACTGGCGTTCTGCCGGTCGACCACCACGGCCATACGCTTGAGGCTCTCGACCACCTGCTCCTGGCTGATCACGCCGTGACGCAGCCAGTTGGCCAGCAGTTGGCTGGAGATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTCGTTGATGTCCGGCACCTTGGAGCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 128909-130438 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABLUB010000018.1 Pseudomonas aeruginosa strain PASP475 NODE_18_length_134764_cov_68.1885, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 128909 28 100.0 32 ............................ GGGCAGGATCGGCCGCGACAGCGGCAGGTGCA 128969 28 100.0 32 ............................ AAAGCCAGCCAGCCTGGAAGGCCCTACGAGAA 129029 28 100.0 32 ............................ CGGCACACAGCGAAAGCTGGCGGGTGGATGGT 129089 28 100.0 32 ............................ GGCGAGTCGATGCCGGCATCGAGCAGTTCCAG 129149 28 100.0 32 ............................ TTGTCTTCCTCGGTGATCGCCTTGCACTCGAA 129209 28 100.0 32 ............................ AGGATGCAGATGAGTGGCGCGCCCCGACGAAC 129269 28 100.0 32 ............................ AGCATGAGCGCATCGTCGGGGCGCTGACCCGC 129329 28 100.0 33 ............................ CGTCTTCACAGTTCAGAAGCTTCCCGACTTGCT 129390 28 100.0 32 ............................ TTTGAGGAGGTGATCATTCCGTACCTGCAACA 129450 28 100.0 32 ............................ TATCCATTTCACAGGCTCGCCGTTCTCGGTTT 129510 28 100.0 32 ............................ ACAGGGTGTTGTCGTTGCTGCGCCAGGTTGGA 129570 28 100.0 32 ............................ TGAGAAACCTACCGCGCCAGCAGAAGCCTGAG 129630 28 100.0 32 ............................ CTGACGGTGCCTGGGCTACCGTGCTCCAGGGG 129690 28 100.0 32 ............................ TGGCCAATACCGGTGTAGCCGTCGGCACCTAC 129750 28 100.0 32 ............................ TCGTCGACGAATTTGTCGCGTACTCGATATGC 129810 28 100.0 32 ............................ ACCTCCACAAACGCCACGGCGAACATGAACAC 129870 28 100.0 32 ............................ GTTGACGGCATAGGACCAGGGGAGGGTAGGCG 129930 28 100.0 32 ............................ ACGCGCCTTTGAGCAGTGGGGCGGTGGTCTGC 129990 28 100.0 32 ............................ ATTCCGGGCCGCAGAACGACGCGAACCCGGTC 130050 28 100.0 32 ............................ CCGCGCGACCGCGCAGTGGCCGAGCTGCTGGG 130110 28 100.0 32 ............................ ATGACCGGCTCCATTACGCGGTCGACCGGGTG 130170 28 100.0 32 ............................ AACTCCTGATCGATGACCGCCTCGGCGGCCGC 130230 28 96.4 32 ............G............... TCGTGAACCGGCACCGGGACGAACAGGATTTC 130290 28 92.9 32 .........T..G............... GTCCACCAGCGGCAGCAGGTTCGAGACGTAGG 130350 28 92.9 32 ............G....T.......... ACGGTCCCTTGCTCGCGCCGACCAAGCGCCCC 130410 28 82.1 0 ......................G.CTTC | C [130430] ========== ====== ====== ====== ============================ ================================= ================== 26 28 98.6 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CCGCTTCCCGCACAACGCCACGCTGTACCTCGACACCCAGGCGCCGCCCGGCCAGTTGTTCGAAAGCGCGAAAACACGCCTGAAGTCGGCGATCAACGTCCTCGCCATGACCTGTCTGCTCGACGAGAACGAAGAACCCGGCGAAACCCTCGCCTATATCAACGGCGCCTTGCTGAAGCTGGTCAGCGACGCCCTCTCCGAGATCGAAGCGGCCCACCCACGCCAGTAGCGCACATCCCAGGCGCGACGCCCCCGGCCTGGCCAGGGGCTTTGAGACGCGATCCCTTCGAGGCCCATTCGCGCGCGAACGGTGAGGCTCACCGCCCGTCCCGCTCATCACGAAATAGCCTCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGGTTTCTTACGCCCTTGAAAATCAAAGACTTACAAAGCCTCGTAAAAAGAGGGTTTCAAACTGGGAAAACCCTGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGCGGCTA # Right flank : CCACTCGGACTCGCAAATGGACGCTGGAAGGCAAGAGACGATCACCGTGGAACGACTGGAAGACAATGCCGTTCACACCCGGCTTTCCCCTGACGAAACGAATAGCCTGTCCGTCTCCGTAACGCCCCTGTCAACTTGCCCCGGTAAACCGGACCTTCGTGAAGCCTGCGGAGAACTCCGGTATGAGTGGGATGGACCTCAAGCGCCGCCGCGTCGTGCAAGGCCTGGGCGCTGGACTGCTGTTGCCGGCGCTGGGCGCGCCGGCGCTGATCGCCTCGCCCAGGGCGCGGCCGAAGCTGACCGATGGCGTGCAATCCGGCGACGTGCAGGGCGACCGCGCGCTGGTCTGGAGCCGCACCGACCGCCCGGCGCGGATGATCGTCGAATGGGACACCCGTAGCGTCTTCAGCGAGCCGCGCCGGCTAGTCTCGCCGGTCACCGACGAGCGCCTCGACTACACCGCGCGCATCGACCTGCGTGGCTTGCCTGCCGACCAGTCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 125-572 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABLUB010000039.1 Pseudomonas aeruginosa strain PASP475 NODE_39_length_48284_cov_62.8204, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 125 28 100.0 32 ............................ GTGTCGAAATGTTTGCCCTCTGCGTACCAATG 185 28 100.0 32 ............................ GAACTGGCCGCGAGTGTCTTTGAATGTCTGGA 245 28 100.0 32 ............................ GTGACAGTCGCGACGCCCCACTGCATGGCAAT 305 28 100.0 32 ............................ TATCTCCCAGTGAAAAGTGCCGGATCATATCT 365 28 100.0 32 ............................ ATCCGCGAAGTCATACTTCTTATTCACGTCCG 425 28 100.0 32 ............................ AGTACAGCCGTGGGATGTGGGTCGACCACCCG 485 28 100.0 32 ............................ TGCGCCCTGCTTTCGGTAGGAAAATCAGGCAG 545 28 96.4 0 .........T.................. | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.5 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : TTTTCGGACGATTTCTTACGCCCTTATAAATCAGTAAGTTAGGAGGCCTCGAAAAAAGAGGGTCTCTGGCAGGAAAGACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTAG # Right flank : ACTCGAACCCACCTCGGCCACAACAGCCGCCGGTTTCACTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTACCAAACATCCGAATATAAGGTTCCTACCCCACCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGCAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCGGTATTCGATAGATCCGATAGGGACAAGGCCACGGTCAGCATGGACGACATCTCCCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 10093-9527 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABLUB010000039.1 Pseudomonas aeruginosa strain PASP475 NODE_39_length_48284_cov_62.8204, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10092 28 100.0 32 ............................ TGCTGACCGACGCGGGCGTCGCCGATGGCTAA 10032 28 100.0 32 ............................ ACCACAGGGCAGAATACCTCTATATATTCCGA 9972 28 100.0 32 ............................ AGGTAGACCGCTCGCTGCGTCAGCAACTGGCT 9912 28 100.0 32 ............................ AACTTCCTCAACCAGGTGCCACCAGACCGATG 9852 28 100.0 32 ............................ GACCCCCGGAGGACCAACCGTGGACAACGACA 9792 28 100.0 32 ............................ GTGGCTATCGCGCTTGATGCGGGCCCGGTCGA 9732 28 100.0 32 ............................ AGCACGTGGCGCATAAGTCGGCTCAGCAGCTC 9672 28 100.0 31 ............................ TCCTTCGGCTCCGCCGGCCGGATCGCTGCAT 9613 27 92.9 32 .....................A..-... TGTCGCGAAGTTCATAAGCGGGCTTAGGGCGA 9554 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 96.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATGGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGGTCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGCCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGGTTTTTGGTCTA # Right flank : CGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGGAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCCG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 125-693 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABLUB010000061.1 Pseudomonas aeruginosa strain PASP475 NODE_61_length_12489_cov_60.3377, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 125 28 100.0 32 ............................ AGCTTGCGGCCGAGCTTGGGCAGGGTCACGGA 185 28 100.0 32 ............................ ATCATGGAAAAGCCGCGTTCGAACAGCCGAGA 245 28 100.0 32 ............................ TAGGGTTCAGCCGGTGGCTGCGAGTGTCGATT 305 28 100.0 32 ............................ CAGCGCGTGATCCACTACGCGGGCGGCTTCGA 365 28 100.0 33 ............................ GAGAGATTCGGCGGCGATGGAGGTGATGTTGCT 426 28 100.0 32 ............................ TGCAGCAGCGGGTTGGCGGCGCGGTTGGTGGT 486 28 100.0 32 ............................ TGCGTGCAGCGAAGCCTGGTCATAGGCCAGGG 546 28 100.0 32 ............................ TCGTTCGGCGTGGCCCCCTTGGCATTCGCCAG 606 28 100.0 32 ............................ TGGTGCTGCGGATCCGTCCGGCGCGGCCGGCG 666 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 10 28 99.6 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : TTTTCGGACGATTTCTTACGCCCTTATAAATCAGTAAGTTAGGAGGCCTCGAAAAAAGAGGGTCTCTGGCAGGAAAGGCTCGGTATTTCTTTTTCCTTCAAATGGTTATAGATTTTCGGAGCTAG # Right flank : GTCGCGAGCGATATAGTCCCGTAGGGCGGATAACGCCACGGGCGTTATCCGCCGATGTCACGGAAAGCGGCGGATAACCGCAAGCGGTTATTCGCCCTACGGATCAGGACTTCGGAATGAACTCTTCTCTCAGGCTCATAGCGTCTCTCGTGGTCTCTCTCCGGCAACTCCGCACACCTGTCAGCCACGTCTCCGGTCCGTACAGACGCTTGCAAAAGGGACTGGCCTGGGAGGGCGAAACGAGAAGCCGAGGCAGGCAAGGAAATCAGCTTGCCCAGCACATTCAGACTCAAGACCACGAGGGCAGAAAACTGCCAGCTTCAGGCCGGCAACAACGGCCGACAGGCTTCGACGAAGCGCCGGCAGGCACCCGCACATTCGCGCTCCAGCGGCTCGTCGCCATCGCAACGCTCCGCGCATGCCAGGGCATAGCGCGCCGCCAGCTCGCAGGCGGCCGGCGCCCATGGGCTGCGGCGCTCCAGCAGCAGGGCAGCGAGGCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //