Array 1 50560-50245 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB900654.1 Teredinibacter turnerae T7902 YUKDRAFT_scaffold_31.32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 50559 35 100.0 34 ................................... GGATGGCCCGGTATCCAGCAAGTCAGCAACGCTG 50490 35 100.0 35 ................................... TTCATAGCGACATATGAGAGGACCGCCCTTACTAT 50420 35 97.1 36 .............C..................... AAGGAGAGAGATCTGAGTGGTTTGATTGGTTTGATT 50349 35 97.1 35 ......................G............ CACTGCGTACACCCATGAAATGGAGTATCCTGTAA 50279 34 77.1 0 .............C........G.T.-...TCGG. | T [50253] ========== ====== ====== ====== =================================== ==================================== ================== 5 35 94.3 35 GTCGCAATCGACATTAGCCGCTAAGGCTGTGAAAC # Left flank : GGCAAAGTGAAGACGTTTACGGCAACGCCATTGCCGATTTTCCGAGTGTGATTATTGTGTAGCGCCAGTGGCGAAGCAGAGTTATCGGTTTCGGGCGAAACGAAGGACAAACCACGCCAGTTCAGCACAAAACAACATAAAAATTTGAAAATTCAAAAACATATAAGAATAACTTCACGTATTACATTAGCTTTGCGTCGCCCANGCAATAAAATCAAACACTTAGCGTTGCTCCGGAGGCAAATTAGCGCGATAATGCACCCTAAATCAGCCCAAACTAATGGTTTGCAAAGAGCGTCGCCCAAACGGGGTTCTAGCATGCTGATTTATAAAGGGAAAAATGGAGAGC # Right flank : TCAGAGGGAAGGTAGTGGTAGGACCGGCAAAAACCGGTAGAGTCCGGCGAATCCACAGGCACCCGGCGGAACATTGAAATGCGCGAGCCAACAACCAGCACGCTTTAAACGTTTGGCTCACCACTGTTTTTTTATTTCACATGCCTGCCAGTATTCGGCAGGGCAGATACAACTCGCTAACGGTAACCCGGCTTAAATCGCCAAACCTGAATGCCGCTATTTCATCAAAGACGCTCTGCTCAACTAAATTCGGCGCCTTTCTGAGTTTCAATGGCAATAAGCCTCTAATGGATGCTGCATTGCTGATAATAAATACTGCGCTGGAGCTGGCAAATCTAGGCAGAATTTATGAGCGCAGACTGCTTGTCGTTACCAAACTAAATTGGGCAACGGTAATGCATCATTTTTGTGAGCGCCGCTGCGGCGAGCTACAACCTTATGAGCTTAACAGAGTAAACATCGTTCTCTCGCAAAGGGAGTTCCAGGTCGAATCGACCACT # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCGACATTAGCCGCTAAGGCTGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 17318-17743 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB900652.1 Teredinibacter turnerae T7902 YUKDRAFT_scaffold_3.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 17318 32 100.0 33 ................................ GGCTCAGCGAAGAGCTACACCCGTTTGTAAAAG 17383 32 100.0 34 ................................ TTGCTCAAGCTGCGCGCGTAAGAACGGTATTCGC 17449 32 100.0 34 ................................ CCGAGGATCTCGCCACCCAGTAGCCATCCAAATC 17515 32 100.0 34 ................................ CTCTGCTGCGGCCTCGCTGTCAAATTCTGGCGGC 17581 32 100.0 34 ................................ TACACCCGTTGCGATTGCTGCGGGCTACAGCAAG 17647 32 96.9 33 .............T.................. TGGGCATCGCGCTTACTGCGGCGGGTGTGTGGG 17712 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 7 32 99.6 34 TTCGCGCTCCTCGCGAGCGCGTGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACTTCGCGCTCCTCGCGAGCGCGTGGATTGAAACCTATTGTGAGGTCGCACCAGGTGTTCGACCTGCAAG # Right flank : CCATTCAAGGTAGATAACCTTGCTAGCCTAACCTATTCGCACTCATCTCGACTAATAATTTAAAGAGTTGATCTTTGCTCTACCTGACGAGCCGAGAGAAAAACGACGGTCTTGTTGACGCTAGGCGCGCTCGCAGTATAAGAATACTTGTTATCGCAAGCATATTACGCTGTTGAAAACCGGCCCGAGCTTTAAATTACTAACCTGGCGAAGGTAGGCACCTGTTAAAAAGCAGGTCTAATCTATTTAGAACACTACTTAAGCAACAACCAAAAATCGCTGGGAATAAAATCATTCCCGGCATCTAACTCGAGCCACAGCAGGCCCTCATCTACCAGGCGGGCACGGATATGCTCGCCGTAAAACAGGTTATTGCTAAAGCACAGGTGGGCGTACTGCTTAGTACCCGTTTGTCTGCCCGGCTCACGGTATTCACGCGTACAACTCACGAGCGAGCCAGCTGCGCTGTCTTTTTCGTTGCTCTTGTAGGCGCAGCTCAC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCGCTCCTCGCGAGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //