Array 1 246208-247615 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS483518.1 Parvimonas micra ATCC 33270 Scfld_02_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 246208 30 100.0 34 .............................. CCAATGAATTCAGTCATAGCGTTTTCATCTTTAC 246272 30 100.0 36 .............................. TATTTAGCTAATGATTTAATTGCTACTCCTGCAAAG 246338 30 100.0 35 .............................. GTTCTGCAACTTTTTTACTTTCTACAGCTTTTTCA 246403 30 100.0 36 .............................. TTTTCTATTGATATTTTATTATTATTGATTAATTCG 246469 30 100.0 35 .............................. TATATTTTGTCAAAAATATTTTTTGGTTATTTTTC 246534 30 96.7 41 ...........G.................. GTTGCTGCTAATCCTGATACAGTTCCAACAGCTGCTGCTGT 246605 30 96.7 35 ...........G.................. TAAGTAAAAACTCCTTGTTCAAAAGTAGTAGTTGT 246670 30 96.7 37 ...........G.................. TTATGATAAGGAAAATTAGGTTTGTATTCCTGATATT 246737 30 100.0 35 .............................. ACAACTCCTTATTCTCGTATATATTGCCTATTACT 246802 30 100.0 35 .............................. TTTGTTTATTTTTCAGTATCTCATCTACTGTAACT 246867 30 100.0 35 .............................. ACTTCCTTTTGTTGAAGATGTGGACAACGAGATTG 246932 30 100.0 38 .............................. GATTTCCCATTAAGCCCATTACCAAAGAGAATAAATAA 247000 30 100.0 36 .............................. AAGGAAGTTAAAGAAAAATAGGAGATAGAAATGCTT 247066 30 100.0 39 .............................. TTATATTCTGTTGACATTTTTATAAATTGTCTATCTTCA 247135 30 100.0 35 .............................. ACTACTTGAGGGGCCGTATTTGAGTTAGCACCTAT 247200 30 100.0 31 .............................. CTGATGATATACTCATCAGCGAAACGTTGTT 247261 30 100.0 36 .............................. TCCATGTTTTTCTCCTTTCTCTTGTCCTGATTTTTT 247327 30 100.0 35 .............................. TTTAATAAGTCTTGATAAAATTTTAATCTTTCAAG 247392 30 100.0 34 .............................. TACACAAGAATTTTTTTGCCTTTTGCTGTGTATC 247456 30 100.0 35 .............................. GAAAATTTAACCGCTTGATAATATCGCCATTCTTC 247521 30 100.0 35 .............................. TTTACTCCTTGAATCATAGCAACTGCAGTTTCAAT 247586 30 83.3 0 ........................T.CGTA | ========== ====== ====== ====== ============================== ========================================= ================== 22 30 98.8 36 GTTTAAATAGAAACATACTGTAATGTAAAT # Left flank : GAAATAGTAATAAAAAAGATTACTGATAACAAAACTAATGTAAATTATGAATTTAATATGGAAATATCAAAAGAATTAATGAAGATTATTAATAATATAAATTCTGAATTAAACAATATAAATGACGATGAATACATTTTATTTTTAGGAGGCTTTAAAGGGAAAATAAATTCTCTTAATGGTAAAATAAATATTGATGATATTAAAAGTGGATTTTATTTATGTGATATCGGAGGCAAAAAATATCTTCCATATGGACTTGTAAAACTAAAAATTGGAAATTGAAAATATTTATAAAGAATAGTAAAATTATTAAAAAAGATGATTTGTCAACCTTCAGTATATAAAATTTATTGGAGGTTCGACAGATTAAAAAATTGTTATAATTTCAAGTAATTCTGTTTCGATTAAAAAATTTAGTGGAAAATTTCAAAAAAATTTTGTATATAGACAGAATTGACTTATTAATGGTAGTATTTTCAATATGTACAGAACTGCCT # Right flank : AGGATAGTTATATTTTTGACATTGAGATGGCGATTCAAGTCTTGTTTGTGAGTAGTGAAAATGTCATTACTATATTGCTAATCCTAATAGATTTATTTCTGTATTTTGATTAGCAATTATGCTATAATATAAAAAAATATACAAAACTAATTATATAAACTATTTTGTATTTATTATTTGACACATTGGAATGGTAAAGTTTTAGGGGGGCTGTCTTATGAACGAATTTAATAAGTATAAAATACTAAGTGCGGGAAAGGCGTTTGGACATAGGGCTAAAATTGCTTTATTATTACTTGATAGCAGTACAGCTTATGAAGAACTTAAAGAGGAAGCTGCACAGACTTCAGTTTCTGGAAGTTATGATTGTGTAGGTGGTTTTCCTGCTGAAATACTTGAAAGAATAATAAAGGAATTGATATGCCGTGATATATGGTATTTGCCTGACAATGTAAAATTTTGGGACAGGCGTTTTGGGAGTCTATTTGAGACAAAGTTTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAATAGAAACATACTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 250160-250912 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS483518.1 Parvimonas micra ATCC 33270 Scfld_02_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 250160 30 90.0 35 ..A..G..G..................... ATAAACTTGCTTGTGGGTCTAAATCTATTAATAAA 250225 30 96.7 36 ...........G.................. ATATCTAAATAAGGTATCTTTCCGCCTGTAAAAGCA 250291 30 96.7 35 ...........G.................. TTTTTCTATTGCTCTACTTTTTAAAATTTCTTTTG 250356 30 96.7 34 ...........G.................. TAAAGTCGCTAAAATTTATCTTATTTTTGCATTT 250420 30 96.7 36 ...........G.................. ACCTGTTAAAGAGTTTAACTTCACAGGATCACTCTT 250486 30 100.0 36 .............................. ACCTGTTAAAGAGTTTAACTTCACAGGATCACTCTT 250552 30 100.0 41 .............................. ATTTTAAGCGAGTTTTTAGCTTATATAAATTCCATTTATGA 250623 30 100.0 37 .............................. TTAGCTCATTATATTCTCTTAAACATTTTGAATGCTC 250690 30 100.0 34 .............................. ATCAAAAATTTCTAAGTAATTATTTTGCTTTTTT 250754 30 96.7 35 ..........C................... GTAGCAATAGTTGAAGATGAAAACGGATTACAATC 250819 30 100.0 35 .............................. TATTGTCTTTCAAGTATTTTGAATAAAACTCTGTG 250884 29 90.0 0 ..........C......T.....-...... | ========== ====== ====== ====== ============================== ========================================= ================== 12 30 97.0 36 GTTTAAATAGAAACATACTGTAATGTAAAT # Left flank : ATTTATGATGATGGACTTTATTATTGTGATTCCGAAGTTCGGCTCTAAACATTTTGGTGCACCTGATGATATAAAGGAAATGATGGAGAAGATACCGGACAGAGCTTCTTGGGTGAATATAATTGGTGTATGTATTATGATAGTCGGATTTGTTGGAGTAATAGCGGTTTTTATATGGGCTATGGTTGATACGGTAAAAACTGATATGTCTTTTTTTGGTGCATTCATCAGATTTTTCATTATCACTGAAGGATATAAATTATTTGATATCATATTTTTTGATTATCTTATGCTTACAAAGTTAAAGTTGCCTGCAAAGATTTACCCTGAAACTGCTGGAGCGAAGGGATATGACAACTTTGGATTCAATACGAAAAGTCAAATGAATAAGCTTATTATATTTTGTGTTGCAAGTATTCTTTTAGCATTCATTTTAACGGTAATTATTCCATTAATGTAAATAAATATATTTGATAAATTTCATTAACACCGAACTTTTT # Right flank : TTAGATATTTACAGTTAGTATTATACTTAGCTAAAATATGAATACATTGTGTTTGCAAATTATTATACAAATCGGTTATAATATATATTACTTAAAAGATTTTTAAATTAATATTATTTTTTATATAATTTTTGATGTAATTAGTAATATGTTTGGAGGAAAAATGAAAGCTATATTTTTTGATTTGGATGGAACTTTGCTTCCTTTAGATGAGAAATTATTTGTTGATATTTATTTTGCGGAATTGTCAAAAGTATTTTCTGTTTATAATATTGATAGTAAGAAGCTTGTTGAAACTATTTGGACTGCAACTCATGAAATAATTAAAAATGATGGAAAGAGAACTAATGAAGAGGCCTTTTGGGATAAGTTTAATAGTAATATAAATATTGATTTATCTGATGTTAAAGAAGTATTGAAAAAGTTTTATGCAAATGAGTTTTTTACTAAGTTAAAAAAGTGTTCAACTGAAAATAGTTTGGCAAAAGTTGCCGTTGAAC # Questionable array : NO Score: 2.80 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAATAGAAACATACTGTAATGTAAAT # Alternate repeat : GTTTAAATAGAGACATACTGTAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //