Array 1 213036-212408 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGPW010000003.1 Planococcus sp. ISL-109 Planococcus_sp_ALS7-contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 213035 36 100.0 30 .................................... GCCGTAGCACTTGCAGCAGTCACCCAAACA 212969 36 100.0 30 .................................... GGGTGTTTAATGACACTGGCGTGGTTGAGC 212903 36 100.0 30 .................................... CCGGGAGACGTGTAAACCGTTCCCCCACAT 212837 36 100.0 30 .................................... CACCGATTGCGGTTTCTCCGGCATCTTTTG 212771 36 100.0 30 .................................... GGCGGCCGACTTCCTTGTGGTCGATGACAT 212705 36 100.0 30 .................................... ACGGTTGGGATTCCATGTAATGGGTTATCA 212639 36 100.0 30 .................................... AGCTCTTGGAACTCCGTCATCTCGTCCACA 212573 36 100.0 31 .................................... CCGTGAGTAGCGCGTGTTCATCCACGGATTC 212506 36 80.6 27 .................C....A..GAA......CA TGGACATATGGCTTACCGTGCCTTAGC 212443 36 83.3 0 A.....A......A........T...A.T....... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 96.4 30 GTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAAC # Left flank : TCAATCAGGTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAACTGGAATATGAAACCGTTGTGGAAATCATGGGTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAACTCACCTTTTCCGACGCCTGGAACAAATATTGTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAACCTGAAATTATGGACGATATAGAAACAGATGAGTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAACGAACAGCCTGCGTATATCATATTCTTATCAGTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAACTCGCGCGGTATCGGATCAGAGAGAGGGTAGGTTTTAGACCAATGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAATGTAATTTTAGAGAGTAGTAAAACGAGCATGATGAAATATCAATCAGATATCTA # Right flank : ACTTGCCTCAATTTTGGGGCGAGTGTTTTTTATATAAGGCGATAGCTAATGGAATTCTCCTGCTCATATTGCCATGCCACTTGTTATGCAATAATGGTATACTGAAAGCAATTCATTTGAAAAGGTGGCAGACGGAATGTCTTCATTTACGGAGTTTTGCGGATATATCACAGCGAGTCCACGCGCGCTCGCTGAACAGGTTGTGGACGGAGTGATCGCGAAAGTGGATCAGAATATCCCGCAAGAGGAACGGCTGCGGGCTGTTGAAATGTACGTGGAACTGCTCGGCTATCTCGGCGAGACAATCGGGCAAGAAGCGGATCTCGATGTGCCGGATGCGCTCATCGAGTGGAGCAAGAAAAATGCGGAGATGCAAGTATCAGCGGGCGGCAAGATTGCAGATATCGTCGTGCGTTATCCGCCGACGCGTGTCGTCATGGCGGAATTGTTCACGGAACTGAGTGTCAAATCGGGGCTCACACTGGAAGAAAACGCGCTGG # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 1-1598 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGPW010000009.1 Planococcus sp. ISL-109 Planococcus_sp_ALS7-contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================================================== ================== 1 36 100.0 30 .................................... CGGTAATTCAACGCGCCGTAAGTCGATTGC 67 36 100.0 30 .................................... TTGTCTCGTTCGTATACTTGGTTGCGTAGT 133 36 100.0 30 .................................... TATATAGCGACCAAGCCCAACACTAAGAAT 199 36 100.0 30 .................................... TTCCGTCCGCTTTAATGCGTTCCATCGCTT 265 36 100.0 30 .................................... TTGAGCGAGCAAGAACTCGGCAGGATTTAT 331 36 100.0 30 .................................... ACAGTTTTCCCCTTTTCCGCTGACCACCTA 397 36 100.0 30 .................................... CAATGTCGTTTGCAGCCGGACGATCAAAAA 463 36 100.0 30 .................................... GCCACTATTCGTCAGCGTCCACAGTTCATC 529 36 100.0 30 .................................... CCGACGACAGCCCCGACGCCACCAAACAGC 595 36 100.0 30 .................................... TGGTGCTTGTACGTTCTCGACAAATGTTGT 661 36 100.0 30 .................................... GTATCGGCAGCGCTGAATGTCCGAGAAATG 727 36 100.0 30 .................................... TACGGGTAAACAAGTGCAGTTCTGCCGTTG 793 36 100.0 30 .................................... CGCAAGAACTCGCTTGTCATCGTATCGGAA 859 36 100.0 30 .................................... CTAATGGCAGCGACTTATGCGAGGTTATGC 925 36 100.0 30 .................................... CTGCTTTAGGCGGCGACTGTTGGCGCTTGG 991 36 100.0 30 .................................... CGGCTGCATACATTGCGGGAAGGTATTCTT 1057 36 100.0 30 .................................... TCCACCATTCGCGATAGCGTCATCAATTTT 1123 36 100.0 30 .................................... ATATAACGCAAGGTGATCTGCGGATGCGCA 1189 36 100.0 30 .................................... TTGATATGAACGTTCGATATGACTCCTGAT 1255 36 100.0 30 .................................... ATCAAAACATATGAATTAGAACGGGTTTAC 1321 36 47.2 74 .................NNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNTTACATTGGTCTAAAACAGAAGAAACAAGATATAATCCCGTTCGCCG 1431 36 100.0 30 .................................... TCTACAGCGGTAACAGGCAAGGCAATTAAG 1497 36 100.0 30 .................................... AGATGTCAATGTCAGTCAAATTATAATCTT 1563 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================================================== ================== 24 36 97.8 32 GTTTTACTACTCTCTAAAATTACATTGGTCTAAAAC # Left flank : | # Right flank : CCTCAAATTCTGAGAGTAGTATTAGCACGTTCTACTGATTAAGAACTCTCGCCACTTTGGATCGAGCATGGTGTAGTCTTCGTGGAAATCGCTGTATGCCAGGCTTTTAGCAAACGATTCGAGTGATTCAGGCGCATCGCTGAAGAATAATTTCAACTCTTCATACAGAGTTTCGATCATGTAGCGTTCGCCAGTATGCCTGATAAGATGGACATTCGAAATGCCTACATGATTTATGACTCGCTGACTCGTGGTCAAGCAAATCATTGTGCACCCCTGGCTATTGGCGAAGTCAAAAAGTTCTTTCAGCTCCGATTTATTCAATTCATTTTCTGGAAAATCATAAAAACATACATTGGTCTTTTTATTATGGACTAAATGCAGCCAACTTTTCAATAGGAATGACTGATATTCGTAAGCTCCAATCGGCTCACCCGTAGCAGATCGAACTTCGATCGGAGCTAGTTTGATTAATTGTTCGAAACTTACCATTTCAGTCG # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACTACTCTCTAAAATTACATTGGTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //