Array 1 129329-127856 **** Predicted by CRISPRDetect 2.4 *** >NZ_QULG01000007.1 Ruminococcus sp. OM05-7 OM05-7.Scaf7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 129328 30 100.0 35 .............................. CCTTGAGAATTCTGCTCGGGATATCTTTAAGTGTT 129263 30 100.0 35 .............................. GAAGAAACTTATTACTGTGATTGCGATGGAAAAGG 129198 30 100.0 34 .............................. ATTAATGGCAAGACCAAAGCTGCCATTACAATTC 129134 30 100.0 35 .............................. AATGATATTACAAAGGTCATTGAAGTTATGAAGGA 129069 30 100.0 36 .............................. TACGATATCTGGATAGAGAAAGGGTATGTGCGGACC 129003 30 100.0 35 .............................. CAATCCCCCTATGTCACAGACAGATACCAGGCATA 128938 30 100.0 35 .............................. CTGGGAACTTCCACTCATAAAACTGCTCGTATACC 128873 30 100.0 36 .............................. GCCGGAGTAACACATAATAAGAATGAGCTGCACTTC 128807 30 100.0 35 .............................. TTTACTTTGCGGAGAGATCATGTGGTGAGTTCAAA 128742 30 100.0 36 .............................. ATAGCCTGCCCTATGCCGTAAGGCGAGACAAAGAAG 128676 30 100.0 36 .............................. TTGTGGAACTTCTTCGCAGGTTTTGTTTTGCGTATC 128610 30 100.0 37 .............................. GAAGAAAGACCGGTTCTGCGACAATCACTGCTACATA 128543 30 100.0 35 .............................. GGAGATGAGATTACGAGTTCAATGGATACCTTGAA 128478 30 100.0 36 .............................. AATTTTCTTTTTGTGGATCGTTCGATTGTTCGGATG 128412 30 100.0 36 .............................. AACAGGATGCGTATAACAGCAGACAAGATCACACCA 128346 30 100.0 35 .............................. AAGGCCGCGACATAAGGGGACTTACGATTGAAATT 128281 30 100.0 38 .............................. CCAGAAGTGTTTCCTTCGACTGTCCAGAACCGATCTCC 128213 30 100.0 36 .............................. AAGAAACTGAAAACAATCATGAGGATATGCCGAAGA 128147 30 100.0 34 .............................. TTATATACAACATTTTATATTGTTTCAATACATC 128083 30 100.0 36 .............................. TTCTGAAAGTCTACACCACTTACATCCGGATTTTCC 128017 30 96.7 35 ................T............. CTCATAAACAGTACTTCACAGTCTATTTCTGTATC 127952 30 93.3 37 ...A............T............. TATGTAAAATAATAAGAAGAATTCACTTCTGGATTTT 127885 30 93.3 0 ................TA............ | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 99.3 36 GTATTAATAGAAACATCGTGGAATGTAAAG # Left flank : TTGGCGAAAAAGAATATGAGGGATTCAGAATATGGTGGTGAGTTATGTATATAGTATTAGTTTATGATGTAAGTCAGGAAGAAAACGGTGCAAGACGCTGGTCAAGAATTTTTAAAATATGTAAAAAATATCTGACGCACATCCAAAATTCTGTATTTGAAGGTGAATTGTCAAAAGGACAGCTGGCACAGCTGCAAAAAGAATTAAAAGAGTATATTGATAAAGAATTAGATTCTGTAATTATTTTTAAATCTCGGCAGGAAAAATGGTTGGATAAAGAATTTTGGGGTAGGAAGGATGATTTAACGAGTTTCATATTATGATTGTCGACGTCAGATAGAGTAAAAACTTCAGGAGGTCGACAATGCTTGAGATATCAGGAAAATTTCAAAAATGAGAGCTGTCCAGAAAGATAAAAATAAGTATAAAAATAATGAAGTGACAAGATTGACAGAAAGTGGTAAGATTATATCTGTATTGTAAGGATGAATAGACGACGG # Right flank : AAATTTTGATAGACGAATTCAATAACAATATGTTACACTTTATGAAAGTTAGAGTTTAATATATCAAATATAAAGGGAAGTGTGTCTATTGAAACAAATTAAAAAGAAACTTCCAATAGGAATAGAAAATTTCGCAAAGCTTCAGGCGGAAGATTTTTACTATGTAGATAAAACGATGCTTATCAAAGAACTTCTGGATAATTGGGCGGAGGTGAATCTGTTTACACGTCCGAGAAGATTTGGTAAAACATTGAATATGAATATGCTGAAAGCATTCTTTGAATTAAACGGTGATAAGAACTGCTTTAAAGGAACAAGAATTTCCAGAGAAGTTTATCTTTGCGAACAATACATGGGAAAGTTCCCTGTGATTTTTATTTCCCTGAAGAGTATCAGCGCGCAAACTTATGAAAAAGCCTGTGATATGGCAATACAGATTGTAAATGGTGAGGCGCGTAGATTCCAGTATTTATTGGACAGTGAACGTTTGACGGAATATG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAAACATCGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 108154-109973 **** Predicted by CRISPRDetect 2.4 *** >NZ_QULG01000005.1 Ruminococcus sp. OM05-7 OM05-7.Scaf5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 108154 36 100.0 38 .................................... GGTTTCCATACTGCTTTCGCGCTGCAAGTCCGCCTGTT 108228 36 100.0 35 .................................... TAATGTTACCCCATGCGACACTACTTGCAGTCGCA 108299 36 100.0 35 .................................... ATCTTTGGCTTCTGGATACAAACGAAAAAATTTTG 108370 36 100.0 32 .................................... TGTGCCTGAAGCATCAAGAATGTTCTATCAAT 108438 36 100.0 35 .................................... CAAAGTATTCTGTAGTATCGCAATTAGGACGCTGA 108509 36 100.0 34 .................................... TAGATATTTTTTTATAAACGATATCGCTACAACT 108579 36 100.0 35 .................................... TGTCCTTTTTTGTCTTTTCCGGAACGTCCAGCATT 108650 36 100.0 34 .................................... CGTAAATCCGGAGTACGTCCATCATGGTATGTTG 108720 36 100.0 38 .................................... TTTGTTGTTCCTCCTGCTCTGAATTTTTGCACTAAAAA 108794 36 100.0 35 .................................... AGGATATTGATATTGTCCTTGGATTCCTCTTCAAG 108865 36 100.0 35 .................................... CAGAATATGGTTAATGAGCAGCTCGGTTGTTCTTT 108936 36 100.0 41 .................................... TGTTCTTTTGTAAAACTATCAACAGTAGGACGCTTTGTACC 109013 36 100.0 32 .................................... GATACTAAATGGATGGTTAAATCAGGCAAAGT 109081 36 100.0 34 .................................... CGCAGCACGTCAAGTCTTCTCATTATTAACCTCT 109151 36 100.0 35 .................................... CGGTCCTGTCCTGTCAGTGTGAACATTGGCTCGCC 109222 36 100.0 35 .................................... AGCCATTCCAGACTTTGAGCCGTGACACTCTGTAA 109293 36 100.0 35 .................................... TATGGCGTTGACTTATTTAACGTATTCGCTGTATG 109364 36 100.0 35 .................................... TGATATTTTTGATTATCTGGATTAGGTCTCCCTTC 109435 36 100.0 35 .................................... GGTTCATGTAATCACCTCCTATTCAGTTATCTCTG 109506 36 100.0 35 .................................... AATGTGTCCATCAACAAGCGAACTCTCCCTTCTCT 109577 36 100.0 33 .................................... TGCGGTTGTGGATTTGATAAAATTTGTGATAAC 109646 36 100.0 39 .................................... AGTCACTACACACTAAACGTGTGCCATTGTCTAGTGCCA 109721 36 100.0 34 .................................... GTTCTTTCCACCTTTCTTATATATAATTAATATC 109791 36 100.0 37 .................................... ATTTTAGCTGTAGAGTCTAGCATTTGATTTTTACACT 109864 36 100.0 38 .................................... GGATCATCTTTAGTCGGACGACATTTAATCTGCTTAAC 109938 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ========================================= ================== 26 36 99.9 35 ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAAC # Left flank : AAAAAGGAAGATATTTTGGAAGCAGTGCAGTTATTTTATGAACAGTATTATCAGAATTTCCAGAAGAAATTTTCACGAAGTGACAGGAGAAAACCGAATACAGTATTTCTGGGCGGCGGAAGCGGCTTTGTTTCCAAGACAGTGATTTACCCATTATTCGGAGAAAAAGAGGGCATTGAAACTGTAAAAAATATTTTTGACAGAACAAATGTGCCTAAAACCCATCAACATTATAAAGATACTCGTATAGGAGTATCCCCTCATATTTTAAAATGCACAAGATATCAGGGAAAAGAATATATGATGGGGGAATGTGAATTAAATATTATTTGAGCATTTTGTTCTTAAATGCGCGAAATTCTGTATTTTGCCGCGCATGGCTTAAATACTGGATTTGTGAGAATTTTTTACTTTCCAAAACGGCTGCATTTCAATAAAATTACTTTTCCCCCGCAATCCCCCTATTCGTCCCAGACAGGACATGGGGTTGCGGGGATGGT # Right flank : TTCATATCCAAATTTAGAAACAGTTACATTTGGCAATAAAGTGAATTATTACTAGAGAAACAGAGGTGATATCATGAGTCTTTTATATGTAAATGACAGTGGTGCAACAATAGGAATAGAAGGTAACTGCTGTACCGTAAAACAAAAAGATGGTTCGAAACGAATGCTTCCTATAGAATCTCTGGATGGAATTACAATTATGGGGCAATCCCAGATGACGACACAGTGTGCAGAAGAATGTATGCAGAGAGGAATTCCTGTAAGTTACTTTTCAAAAGGTGGTAAATATTTTGGCAGATTAATCTCAACAGGTCACGTCAATGTAGAACGTCAGAGAAAACAATGTGCACTCTATGATACAGGTTTTGCTGTGGAACTTGCTATGAAAATTTTAAGTGCAAAAATCAAAAATCAAAGCGTAGTGCTGCGCAGGTATGAGAAAAGTAAAGGTTTAAATCTGGAAGAAGAACAAAAAATGTTAGCTATCTGCAGAAACAAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA //