Array 1 41577-45088 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZHA010000011.1 Shewanella algae strain A57 A57_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 41577 29 100.0 32 ............................. TCAGTGCAAAATGTGCTGCTTTGGCTTGTTAA 41638 29 100.0 32 ............................. GCTTTGCTGACGCATTGCTTGCAGACCAGTTA 41699 29 100.0 32 ............................. CCAGGTGCCAGCAGCGATTGGAACGCCGCTGC 41760 29 100.0 32 ............................. CCGAGAAGATAGCCCGCCTTGGTATCAGCGCA 41821 29 100.0 32 ............................. CAGCAGACCTAGTATCCTCATTGCTGCTTCCA 41882 29 100.0 32 ............................. CCACAAATCAAGCTACGCCACAGCGACAAGGG 41943 29 100.0 32 ............................. TGCTGACCGGTTTGCCAGCTGGCTCAACGTTC 42004 29 100.0 32 ............................. CCTTCGATAAAAGCATAAAAACCCATAGTGGC 42065 29 100.0 32 ............................. TTGTCGCGCCAGTCATGCGGTTGACTGTTACG 42126 29 100.0 32 ............................. TGCTAACCATGCAAATCATTGACCCGCAAAAC 42187 29 100.0 33 ............................. CTCAGCCGCCCCGCCAGCCCCCAGGTTGTGTCC 42249 29 100.0 32 ............................. AATCCCTCACCTACCAATTCACCTGCAGTAAT 42310 29 100.0 32 ............................. GCGGTAAACATCTGCAAGATTGACATGGTGAT 42371 29 100.0 32 ............................. TCGTGGCACACATCAACGGCGAGCGCATTAAC 42432 29 100.0 32 ............................. CTTGGCATTCTGACGTATTCAGAGCTAAACCT 42493 29 100.0 32 ............................. CTCACAGAGGAAACAAGATCTATTGTCGAGCT 42554 29 100.0 32 ............................. TGCGCAAAGAAGGTAAAGCTAGGTACGCTGCT 42615 29 100.0 32 ............................. TCGGTGGCGGCCACGTTTGAAGGCAGCACTAA 42676 29 100.0 32 ............................. CGCAGCTCGGTTAATCGTGATGCGGTGTTCTT 42737 29 100.0 32 ............................. TGAAATGTCTTGGCGCCGAATACGCCATCCAC 42798 29 100.0 32 ............................. CGACCACCGCCACCAGCGATAGCCTTTGCTGA 42859 29 100.0 32 ............................. GCGCTGTTATAGGTTACGCGGTAGTCGCAGAA 42920 29 100.0 32 ............................. GCAGCACTAAGACCGAGCGCATTATCGCCAAA 42981 29 100.0 32 ............................. TAAAACAATGGGCAAAGCATAAGTGACCATAT 43042 29 100.0 32 ............................. CCCACTGATAGTGGACACGAGCATTTGAGCTC 43103 29 100.0 32 ............................. GTGTGATGATATTCGCGGCCACGATTAGCCAT 43164 29 100.0 32 ............................. CGTCTTCCCGTTGGCGTCTAGCAGCTCTTTGA 43225 29 100.0 32 ............................. ACCGTCTATTGTTGCAGGCAGCGTCTTTTGCA 43286 29 100.0 32 ............................. CTGGCGGTGATCAATGATGTAGAAGCAGTTGA 43347 29 96.6 32 ............................A ACGTCAAAGTGAATGGACTCAAACCAGAGATC 43408 29 100.0 32 ............................. GCATCCGTGACAATCTGCTCGGGTGAGCGGTC 43469 29 100.0 33 ............................. TCATCGAATCAGCCGCCATCAGTGCGCTTCAAA 43531 29 100.0 32 ............................. TCAGAGCCAATGAGCTTTACCCAACACCGGAT 43592 29 100.0 32 ............................. GCTTTGTTCGCTGTCGTCTTCATGCGGCAGCA 43653 29 100.0 32 ............................. CTCATGTTGCTCACTCTTGTTTGGGTTCAGAG 43714 29 100.0 32 ............................. TGGATACGCCAGAAAACGGAGTCCTTGACGGC 43775 29 100.0 32 ............................. CATGATGGATTCTTGGCTTACGAATACTTTTA 43836 29 100.0 32 ............................. CGGCGACAGCCGCGCACCTTGGAGTTCTGACA 43897 29 100.0 33 ............................. CACATCCTGGGCGCTGACGTTTTTCACGTTCAT 43959 29 100.0 32 ............................. GCCAATGCCGCCGCAGAAGCACAGGCCGCTGC 44020 29 100.0 32 ............................. TCAGGGGTTCTTCGCCCTGTCTCGTAGTGATA 44081 29 100.0 33 ............................. GTGGGTGACTTGCTGGCTTTTTTCCGTGCCGGC 44143 29 100.0 32 ............................. CGCAGGCGAGAACAACAGCCGCCGCGCTGGCC 44204 29 100.0 32 ............................. TCAATCACAGTCAACATCGCGCTGGATCTGCG 44265 29 100.0 32 ............................. CAATAAACATTACAACAGTGGCAATAATATGA 44326 29 100.0 33 ............................. AAAAAAGTGGAGGTAAGATGGCTCAGTCTCACC 44388 29 100.0 32 ............................. TGCGTTGTGATTTCAATCGGTTTACAGAGTCA 44449 29 100.0 32 ............................. GATTTAACACAGATTCGTAAGCTATCAATTGA 44510 29 100.0 32 ............................. TCGCATTAGACCACTTACAACTGACAACCCCT 44571 29 100.0 32 ............................. CTACGTTCATTGCACAATATGGTGAAAGTGTA 44632 29 100.0 32 ............................. ACTTTCAAGCCAAGGTAAATCCTTCAACTCGC 44693 29 96.6 32 ............................T CCAGCGAGAGCAATGGCTGGCTGAAAACGTCC 44754 29 100.0 32 ............................. TAACTCATAAGGGTTGGCGGCCGACACGTAGA 44815 29 100.0 32 ............................. CGCATAGCCGCAGAAACAGCCGGAGCAATAGC 44876 29 96.6 32 ................T............ GGCGGCTCCAGTCATTCGGGACGGCGAACGCT 44937 29 100.0 33 ............................. TATGTAATGAGCTACCCACTCATTGAATGGGGG 44999 29 100.0 32 ............................. ATAACTCTGAAAGAGAAATAATCTGCATAGAT 45060 29 93.1 0 ..........................GT. | ========== ====== ====== ====== ============================= ================================= ================== 58 29 99.7 32 GAGTTCCCCGCACCCACGGGGATAAACCG # Left flank : GGTACTGGCAGCCGGTGAAATTGAGCCGCCTCCAACTCCAAAGGATGCCCAGCCCATTGCTATACCAGAGCCGAAACCGTTGGGAGAACAAGGACACAGGAGCCAGTAACTATGAGTCTGTTGGTTGTGGTGACCGAAAATGTACCGCCTCGCTTACGTGGTCGTTTGGCCATCTGGTTACTGGAGGTGCGTGCCGGGGTTTATGTGGGTGACACCTCCCGCAAGGTGAGGGAAATGATTTGGTATCAAATCAGTGAATTGGCAGAGGAAGGCAATGTGGTGATGGCCTGGGCCACCAATACAGAATCAGGATTTGAATTTCAAACCTTGGGTGAGAATCGTCGTATGCCGGTGGATTTGGATGGTCTGCGACTGGTCTCATTTTATCCAACTGAAAAATAACAAAATATTGCTCTTTAACAACTTGGAATAATAGCCTAAAAAGTTGGTGAATATTTTTAAGTGAAAAATCGCTTAAAAAACAATAGTATTTACCAAGA # Right flank : GTATTTCTTTACTGTACAACCCCAGCAAAATCCGAATGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGAGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCGGCTCTGGGCGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCAGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGGGAGCGGATAAGCGGGGCAGTGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACCTCCTGGTGGTGAATTGCCGGAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCACCCACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.10,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //